Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01725 ATGGAGGACGACAATAAGGCGGGAACAGCTGAGAGCCTCATCGATTTGGTCAATCAAATATCTTCCATCTCCGATTACAGGCCAACGGTCAAGAAGGAGTACTGCAACTTGGCCAGGAGGCTCAAGCTCCTCACACCATTGTTCGAAGAGATTAGGGACAGTAAGGACCCTCTCCCTCAACAAACTTCAAACGCTTTGCTTCAGCTGAAGGAAGCCATGGAATCCGCCATGGACCTCCTCAGATTCGGTAGTGAAGGCAGCAAGATTTACATGGTCATTGAGAGGGACCAAATTATTAATAAATTCCACGAGGTGACTACTCAGTTGGAACAAGCATTGGCTGGAATTTCCTATGATAAGCTTGACATTTCAGATGAAGTTACGGAACAGGTTGAGCTTGTTCTTGCACAATTTAGAAGAGCCAAAGGAAGGGTTGATCCAGCTGATGCCGAGTTGCATGAGGATCTCTTGTCCCTTTACAACAAGAGCAACGATGCAGCTACAGATCAAGCTGTTCTACGGAGATTAGCCGAAAAATTGCAACTGATTGGAATAGCTGATCTCACACAAGAGTCGCTAGCTTTGCACGAGATGGTGATCGCGAGTGATGGGGATCCAGGGGCAAGCATTGAGAAGATGTCAATGTTGCTGAAGAGAATAAAGGATTTTGTACTAACAGAGAATCTAGACAAGGATGATAATGTAGGAGGAAACAGCCTTTCTTCAAGTTGCTGCAAACAAGGGACAAATGAAAAGAATCATCAACCCCCAGTAATCCCTGATGATTTTCGATGCCCAATTTCCCTCGAATTGATGCAGGATCCTGTCATAGTATCAACAGGACAGACTTATGAGCGTTCCTGTATAAAGAAATGGTTGGAAGCAGGACATGGTACATGCCCGAAAACACAGCAGACCTTATCTAGTACTGTTCTCACACCAAACTATGTCTTAAGGAGCCTCATAGCACAATGGTGTGAAGCCAATGGCGTAGAGCCACCAAAGAGACCTAGCAGTTCTCGAACTGATAAATCAGCCTCTGCCTGCTCGCCGGCCGAGCGGAGCAAGATCGAAAATCTTCTTAGGAAGCTCACATCTGGCAATCCTGAAGACCAGAGATCGGCTGCAGGCGAGATTCGCCTTCTTGCAAAGCGCAATGCAGATAATCGCGTGGCCATTGCGGAAGCTGGTGCAATACCTCTTCTTGTTGGTCTTCTCTGTACACCTGATTCCCGCGTTCAAGAACATGCTGTTACTGCACTTCTGAATCTTTCCATATGTGAAAACAACAAAGGAAGTATTGTGTCTTCAGGGGCAGTACCGGGAATAGTTCATGTGCTCAAGAAGGGAAGCATGGAAGCTCGGGAAAACGCTGCAGCCACACTTTTCAGCCTTTCAGTTATTGATGAAAATAAGGTTACAATCGGTTCTTCAGGGGCCATTCCACCATTAGTTACACTGCTGAGTGAGGGTACCCAAAGGGGTAAGAAAGATGCTGCAACAGCACTCTTCAATTTGTGCATTTACCAAGGGAACAAGGGAAAGGCAGTAAGGGCTGGAGTCGTTCCCACGCTTATGCGACTGCTGACAGAACCTGGCGGGGGAATGGTGGACGAAGCATTAGCCATTTTGGCAATACTAGCTAGCCATCCTGACGGAAAGGCAGCTATTGGCGCTGCCGAGGCGGTGCCTGTATTGGTTGAGGTTATTGGGAATGGATCCCCAAGGAACAAAGAGAATGCAGCTGCTGTATTGGTGCACCTTTGCAATGGAGATCAACAATACATAGCTCAGGCACAGGAGTTAGGTGTGATGGGTCCATTGTTGGAATTGGCTCAACATGGCACAGACAGAGGGAAAAGAAAGGCAGCACAATTGTTAGAGCGTATGAGCAGGTTCCTTGAGCAGCAACATGAGGATGAGGAATTTCAAACACAAACTGAACTATTGCCTTCTATTAATACTACTACTAACCTTGATAGCTGA 1986 0.4663 MEDDNKAGTAESLIDLVNQISSISDYRPTVKKEYCNLARRLKLLTPLFEEIRDSKDPLPQQTSNALLQLKEAMESAMDLLRFGSEGSKIYMVIERDQIINKFHEVTTQLEQALAGISYDKLDISDEVTEQVELVLAQFRRAKGRVDPADAELHEDLLSLYNKSNDAATDQAVLRRLAEKLQLIGIADLTQESLALHEMVIASDGDPGASIEKMSMLLKRIKDFVLTENLDKDDNVGGNSLSSSCCKQGTNEKNHQPPVIPDDFRCPISLELMQDPVIVSTGQTYERSCIKKWLEAGHGTCPKTQQTLSSTVLTPNYVLRSLIAQWCEANGVEPPKRPSSSRTDKSASACSPAERSKIENLLRKLTSGNPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLCTPDSRVQEHAVTALLNLSICENNKGSIVSSGAVPGIVHVLKKGSMEARENAAATLFSLSVIDENKVTIGSSGAIPPLVTLLSEGTQRGKKDAATALFNLCIYQGNKGKAVRAGVVPTLMRLLTEPGGGMVDEALAILAILASHPDGKAAIGAAEAVPVLVEVIGNGSPRNKENAAAVLVHLCNGDQQYIAQAQELGVMGPLLELAQHGTDRGKRKAAQLLERMSRFLEQQHEDEEFQTQTELLPSINTTTNLDS 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01725 661 CDD MLKL_NTD 7 139 - -
Arst8g01725 661 SUPERFAMILY RING/U-box 249 335 - -
Arst8g01725 661 Gene3D - 8 119 IPR036537 GO:0007166
Arst8g01725 661 FunFam RING-type E3 ubiquitin transferase 533 649 - -
Arst8g01725 661 FunFam RING-type E3 ubiquitin transferase 6 119 - -
Arst8g01725 661 CDD RING-Ubox_PUB 260 312 IPR045210 -
Arst8g01725 661 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 397 439 IPR000225 GO:0005515
Arst8g01725 661 FunFam RING-type E3 ubiquitin transferase 342 493 - -
Arst8g01725 661 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 520 562 IPR000225 GO:0005515
Arst8g01725 661 Gene3D - 340 536 IPR011989 -
Arst8g01725 661 Gene3D - 537 653 IPR011989 -
Arst8g01725 661 SMART Ubox_2 262 325 IPR003613 GO:0004842|GO:0016567
Arst8g01725 661 FunFam RING-type E3 ubiquitin transferase 259 332 - -
Arst8g01725 661 SUPERFAMILY ARM repeat 357 637 IPR016024 -
Arst8g01725 661 PANTHER U BOX DOMAIN-CONTAINING 31 632 - -
Arst8g01725 661 MobiDBLite consensus disorder prediction 331 353 - -
Arst8g01725 661 Pfam Armadillo/beta-catenin-like repeat 469 507 IPR000225 GO:0005515
Arst8g01725 661 Pfam Armadillo/beta-catenin-like repeat 386 425 IPR000225 GO:0005515
Arst8g01725 661 SMART arm_5 468 508 IPR000225 GO:0005515
Arst8g01725 661 SMART arm_5 550 590 IPR000225 GO:0005515
Arst8g01725 661 SMART arm_5 592 632 IPR000225 GO:0005515
Arst8g01725 661 SMART arm_5 509 549 IPR000225 GO:0005515
Arst8g01725 661 SMART arm_5 386 426 IPR000225 GO:0005515
Arst8g01725 661 SMART arm_5 427 467 IPR000225 GO:0005515
Arst8g01725 661 Pfam U-box domain 259 329 IPR003613 GO:0004842|GO:0016567
Arst8g01725 661 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 259 332 IPR013083 -
Arst8g01725 661 ProSiteProfiles U-box domain profile. 258 332 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01725 Arst-Chr8 25734094 25737853 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01725 3 652 U-box Gene Family AT3G46510 70.840 0.0 929
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01725 - - qsa:O6P43_000217 1053.51