Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01682 ATGCTGCTGAACTCTCCTCAGATGGCACATTATTTTATGCTATGGCTTGTGCTTGCTGTTTTTGCGATGGCTACAAGCTTGAGGATGTACACAGCTTGTCAGCATCTTCAAGCTCAGGCCAGGGCTCATGCAGCAGCAGCAACTGGATTGCTTAGCCATACCGAATTATGGCTTAATGTGCCACCATCCATAGCAATTGCAACTAGAGGACAATTGCAGGGGCTTAGGCTTCAGCTTGCACTACTTGATCGTGAATTCGATGAACTAGATTATGATGCTTTGAGAGCTCTTGACTCTGATGCTGTTTCGACTACTACTTCCATGACTGAGGAAGAGATAAATGCCTTACCCGTTCACAACTATAAAGTTGCAGTTCCAACAAAGGATTGCTCAGCAGGGTTGGGATCCTCTTCAAGTGCTGCTGAGAATAAGCAAGCCTGCGAAGGAGCCGAGGGAAATAACCAAGGCCCGGAAGATGAGCTAACATGTACCATATGCTTGGACCAAGTTAACGGTGGCGAACTAGTCCGTAGCCTGCCATGCTTGCATCAGTTTCATGCCAACTGCATTGATCCATGGCTCCGGCAGCGAGGAACATGTCCGGTGTGCAAATTTAAGATGGGTTTGGAATGGCGAGGAAACAGGGAGACTGAGACTGATTCCGACGGTTCAGATATTGCTTAG 684 0.4766 MLLNSPQMAHYFMLWLVLAVFAMATSLRMYTACQHLQAQARAHAAAATGLLSHTELWLNVPPSIAIATRGQLQGLRLQLALLDREFDELDYDALRALDSDAVSTTTSMTEEEINALPVHNYKVAVPTKDCSAGLGSSSSAAENKQACEGAEGNNQGPEDELTCTICLDQVNGGELVRSLPCLHQFHANCIDPWLRQRGTCPVCKFKMGLEWRGNRETETDSDGSDIA 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01682 227 SUPERFAMILY RING/U-box 158 209 - -
Arst8g01682 227 PANTHER TARGET OF ERK KINASE MPK-1 1 209 - -
Arst8g01682 227 ProSiteProfiles Zinc finger RING-type profile. 163 204 IPR001841 -
Arst8g01682 227 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 137 209 IPR013083 -
Arst8g01682 227 CDD RING-H2_PA-TM-RING 162 204 - -
Arst8g01682 227 Pfam Ring finger domain 162 204 IPR001841 -
Arst8g01682 227 SMART ring_2 163 203 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01682 Arst-Chr8 25450236 25453639 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01682 1 227 C3H Transcription Factor Family AT3G55530 66.228 8.75e-95 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01682 K16283 - gmx:100805406 310.457