Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01673 ATGGGAGAAGAGGTTAAGATCGCCGACTACCCAGGCGGCGGCGCCGACGACGAGCGTGTTTCCGAGTGGGAGCTTGGCCTCCCCTCTCCCGCCGACCTTCCGCCGCTCTCTCAGGCCCTGATCCCGCCGGAGCTCGCCTCCGCCTTCAGCATCACCCCGGAGCCCTACCGGACTCTTCTCGACGTCAACCGCGCCTCGCAGGACACCATCTCCGCAATTCGCGGCGGCGCCTCCCAGGCCTTCTCCTCCAGCAATTTCCAACTCGATGACCGCGCCACCGTGTTTGAGCCCGACGCCACGGCGTTTGCCGATGAGGAATTAGAGCCCGATCGAGATGGCTCTGGCTCTGATTCCAGGAAGCTCCGGAAGATCGACAGCGCCGCCGAGGAGGCTGATTCGGCAGCGCCACCGGCCAACGACGATCCCTCCGCCCGGTCAATGAAGCGGCCGCGCCTCGTGTGGACGCCTCAGCTTCACAAGCGCTTCGTCGACGTGGTGGCCCACCTCGGAATCAAGAACGCGGTTCCGAAGACGATTATGCAGCTAATGAACGTAGAAGGATTGACTCGCGAGAACGTTGCGAGCCACCTTCAGAAATATCGCCTTTACTTGAAGCGAATGCAAGGGTTGTCCAACGAAGGTCCTTCTTCTTCTGACCAGTTGTTCGCGTCGACTCCTGTGCCGCAGAGCTTGCACGAGTCCGGCGGTGGTGGCGGAAGCGCGGGGCATTCCCATGGAAACGGACACCTTCCGGTTCCAATTCCGTTGCCGTATCCAGGTCCGCCGGCGATGATGCCAATGCCGATGCTCGGGATGCCTCCGATGGGTATGGCCGTAGGGAACCACCACGGATTCAACCCGTTGGCGCAGCAACGGGATTGGTCCGGTGCGAATAAATTTGGTTCCGTTGTTTCGTACCCTCAGAGTCACAGTCAGGGCGTCACTCCTAGTGATAAATGA 960 0.6104 MGEEVKIADYPGGGADDERVSEWELGLPSPADLPPLSQALIPPELASAFSITPEPYRTLLDVNRASQDTISAIRGGASQAFSSSNFQLDDRATVFEPDATAFADEELEPDRDGSGSDSRKLRKIDSAAEEADSAAPPANDDPSARSMKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLSNEGPSSSDQLFASTPVPQSLHESGGGGGSAGHSHGNGHLPVPIPLPYPGPPAMMPMPMLGMPPMGMAVGNHHGFNPLAQQRDWSGANKFGSVVSYPQSHSQGVTPSDK 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01673 319 Gene3D - 146 208 - -
Arst8g01673 319 FunFam Two-component response regulator 145 208 - -
Arst8g01673 319 MobiDBLite consensus disorder prediction 210 231 - -
Arst8g01673 319 MobiDBLite consensus disorder prediction 299 319 - -
Arst8g01673 319 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 146 205 IPR017930 -
Arst8g01673 319 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 16 291 IPR044841 GO:0003700|GO:0006355
Arst8g01673 319 Pfam Myb-like DNA-binding domain 153 201 IPR001005 -
Arst8g01673 319 SUPERFAMILY Homeodomain-like 147 206 IPR009057 -
Arst8g01673 319 MobiDBLite consensus disorder prediction 104 129 - -
Arst8g01673 319 MobiDBLite consensus disorder prediction 100 146 - -
Arst8g01673 319 NCBIfam myb-like DNA-binding domain, SHAQKYF class 150 202 IPR006447 GO:0003677
Arst8g01673 319 MobiDBLite consensus disorder prediction 210 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01673 Arst-Chr8 25350059 25352711 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01673 1 302 G2-like Transcription Factor Family AT3G46640 54.799 3.59e-90 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Arst8g01673 Myb_DNA-binding 1.3e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01673 - - zju:107411020 356.681