Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01672 ATGATAGATTTTTTGGATAAGCTGATTAACATGCATGGATGTGGATTGACTAGGTCTCTTCCTCTTCCTCCTCCTTTGACTGCACCCAACAACTTCCTTTCTCAAATTAGCACACAACTATGCTTGAGATCCCTTCTTTCCATCCAGACCCAAAACCCGTCACTTTCTTTCATACCCACTTCTAAATATAGATATACAGGTGCTTTCAGCTACGGGAATCATGGGATTCGTAACAATGGAGGAAGACGTGGCAACAGACCAGTGGCTATGAGAGCAAGCCGCGGAGAATCTCCGTACGAGATTCTGGGAGTGTCCCCATCCGCAACTTCCGACGAAATCAAAAGGGCCTATAGGAAACTTGCCCTCAAGTATCACCCTGATGTTAACAAAGAGGATAAGGCGCAGGAGAAGTTTATGAGGATAAAGCATGCATACAATACCCTGATAAATTCTAATTCCCGCAGAAAATATGATTTTGGAAATCGTGGTTCTGATTTTTCATATTCCTCTTCTCAAAGAAGCCAAAGTAGGAGCACACAAGAAGAAGAATTTTATGGATTAGAGGACTTTTTTAAAGATCTTCAAGAAGAATTCAAGAACTGGGAAGCTAATGCTGCTTCAGAGGGAAAGCCAAAGAGCCTATGGGAGGAAATAGCGGAAATAGGAGAAGAATTTGTGGAGTTTCTTGAGAAAGAACTCAATATTGTTGATACAGAAGCTGATCAAAATAACAATGAAACAACAACTCAGGGTGGAAATAAATCTAACATGTCTGGGACAGGCACACCGGATAATGAAGCTGGCAAAGGAAAAACAAGCATTGAAGATAACCTTGATGATGTAGAAGCCACTCTGGCCAAGTTAAAGAAGGAACTAGGCTTATAG 885 0.4136 MIDFLDKLINMHGCGLTRSLPLPPPLTAPNNFLSQISTQLCLRSLLSIQTQNPSLSFIPTSKYRYTGAFSYGNHGIRNNGGRRGNRPVAMRASRGESPYEILGVSPSATSDEIKRAYRKLALKYHPDVNKEDKAQEKFMRIKHAYNTLINSNSRRKYDFGNRGSDFSYSSSQRSQSRSTQEEEFYGLEDFFKDLQEEFKNWEANAASEGKPKSLWEEIAEIGEEFVEFLEKELNIVDTEADQNNNETTTQGGNKSNMSGTGTPDNEAGKGKTSIEDNLDDVEATLAKLKKELGL 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01672 294 SMART dnaj_3 96 153 IPR001623 -
Arst8g01672 294 Coils Coil 226 246 - -
Arst8g01672 294 Coils Coil 271 291 - -
Arst8g01672 294 MobiDBLite consensus disorder prediction 238 267 - -
Arst8g01672 294 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 56 242 - -
Arst8g01672 294 CDD DnaJ 98 150 IPR001623 -
Arst8g01672 294 ProSitePatterns Nt-dnaJ domain signature. 138 157 IPR018253 -
Arst8g01672 294 MobiDBLite consensus disorder prediction 237 278 - -
Arst8g01672 294 ProSiteProfiles dnaJ domain profile. 97 161 IPR001623 -
Arst8g01672 294 MobiDBLite consensus disorder prediction 160 181 - -
Arst8g01672 294 SUPERFAMILY Chaperone J-domain 61 157 IPR036869 -
Arst8g01672 294 PRINTS DnaJ domain signature 133 153 IPR001623 -
Arst8g01672 294 PRINTS DnaJ domain signature 117 132 IPR001623 -
Arst8g01672 294 PRINTS DnaJ domain signature 99 117 IPR001623 -
Arst8g01672 294 MobiDBLite consensus disorder prediction 160 182 - -
Arst8g01672 294 Gene3D DnaJ domain 95 207 IPR036869 -
Arst8g01672 294 Pfam DnaJ domain 98 158 IPR001623 -
Arst8g01672 294 FunFam Chaperone DnaJ-domain superfamily protein 94 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01672 Arst-Chr8 25345080 25347397 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01672 99 158 C2H2 Transcription Factor Family AT1G74250 39.394 1.71e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01672 - - adu:107461539 523.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g01672 8 25345080 25347397 Arst8g01672 8 25345080 25347397 ECH