Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01671 ATGATAGATTTTTTGGATAAGCTGATTAACATGCATGGATGTGGATTGACTAGGTCTCTTCCTCTTCCTCCTCCTTTGACTGCACCCAACAACTTCCTTTCTCAAATTAGCACACAACTATGCTTGAGATCCCTTCTTTCCATCCAGACCCAAAACCCGTCACTTTCTTTCATACCCACTTCTAAATATAGATATACAGGTGCTTTCAGCTACGGGAATCATGGGATTCGTAACAATGGAGGAAGACGTGGCAACAGACCAGTGGCTATGAGAGCAAGCCGCGGAGAATCTCCGTACGAGATTCTGGGAGTGTCCCCATCCGCAACTTCCGACGAAATCAAAAGGGCCTATAGGAAACTTGCCCTCAAGTATCACCCTGATGTTAACAAAGAGGATAAGGCGCAGGAGAAGTTTATGAGGATAAAGCATGCATACAATACCCTGATAAATTCTAATTCCCGCAGAAAATATGATTTTGGAAATCGTGGTTCTGATTTTTCATATTCCTCTTCTCAAAGAAGCCAAAGTAGGAGCACACAAGAAGAAGAATTTTATGGATTAGGTAATTTTTTCAGGGATGTTCAAATAACAATAGAGGACTTTTTTAAAGATCTTCAAGAAGAATTCAAGAACTGGGAAGCTAATGCTGCTTCAGAGGGAAAGCCAAAGAGCCTATGGGAGGAAATAGCGGAAATAGGAGAAGAATTTGTGGAGTTTCTTGAGAAAGAACTCAATATTGTTGATACAGAAGCTGATCAAAATAACAATGAAACAACAACTCAGGGTGGAAATAAATCTAACATGTCTGGGACAGGCACACCGGATAATGAAGCTGGCAAAGGAAAAACAAGCATTGAAGATAACCTTGATGATGTAGAAGCCACTCTGGCCAAGTTAAAGAAGGAACTAGGCTTATAG 918 0.4085 MIDFLDKLINMHGCGLTRSLPLPPPLTAPNNFLSQISTQLCLRSLLSIQTQNPSLSFIPTSKYRYTGAFSYGNHGIRNNGGRRGNRPVAMRASRGESPYEILGVSPSATSDEIKRAYRKLALKYHPDVNKEDKAQEKFMRIKHAYNTLINSNSRRKYDFGNRGSDFSYSSSQRSQSRSTQEEEFYGLGNFFRDVQITIEDFFKDLQEEFKNWEANAASEGKPKSLWEEIAEIGEEFVEFLEKELNIVDTEADQNNNETTTQGGNKSNMSGTGTPDNEAGKGKTSIEDNLDDVEATLAKLKKELGL 305
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01671 305 SUPERFAMILY Chaperone J-domain 62 157 IPR036869 -
Arst8g01671 305 Coils Coil 282 302 - -
Arst8g01671 305 SMART dnaj_3 96 153 IPR001623 -
Arst8g01671 305 PRINTS DnaJ domain signature 133 153 IPR001623 -
Arst8g01671 305 PRINTS DnaJ domain signature 99 117 IPR001623 -
Arst8g01671 305 PRINTS DnaJ domain signature 117 132 IPR001623 -
Arst8g01671 305 Pfam DnaJ domain 98 158 IPR001623 -
Arst8g01671 305 MobiDBLite consensus disorder prediction 161 182 - -
Arst8g01671 305 CDD DnaJ 98 150 IPR001623 -
Arst8g01671 305 ProSitePatterns Nt-dnaJ domain signature. 138 157 IPR018253 -
Arst8g01671 305 ProSiteProfiles dnaJ domain profile. 97 161 IPR001623 -
Arst8g01671 305 MobiDBLite consensus disorder prediction 249 278 - -
Arst8g01671 305 Gene3D DnaJ domain 95 217 IPR036869 -
Arst8g01671 305 MobiDBLite consensus disorder prediction 248 287 - -
Arst8g01671 305 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 56 253 - -
Arst8g01671 305 Coils Coil 237 257 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Arst8g01671 Arst-Chr8 25345080 25347400 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01671 99 158 C2H2 Transcription Factor Family AT1G74250 39.394 1.80e-07 50.4
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01671 - - adu:107461539 553.518