Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Arst8g01585 | ATGACAAATAATCCTTACTACTTGAACAACAATGGTTATTGGTTCGACCTTAATTCTCCAAGCAGCACCTATGTTTTTGGTTCCAATCACGAGTCTCCACCGAGAAGAGAAGCGCTTCCTCTCCTGAATAAGCTAAGCCCTAGCAGGAGTACGAGTAGTAGGCCTCAAGATCTGGAATCTTCGTTTGGTGCCATGGAAGTGAAGGAGAAGCACAAGAGAGGAGATGACGGCGATGAGAGTGTGACGGTGGCTTTGCACTTAGGGCTTCCAGAAACAAGAAGTAAGAATATGACATGCGAAGAAGAAGTTTCAGCAGCGTCAGTGTCACAAGAACAAGAAGAAGGAGGAGGAGGAGGAAGAGGTTCTGATTCGAATTCGATGAATCGAGGTCAATATTGGATCCCAACACCGGCTCAGATTCTGATTGGTCCAACACAGTTCTCTTGCCCCCTTTGTTTCAAGACCTTCAACAGATACAACAACATGCAGATGCATATGTGGGGGCATGGATCACAATATAGGAAGGGGCCAGAATCACTAAGGGGAACACAACCAACAGCAATGCTTAGGCTTCCATGCTACTGCTGTGCACCAGGGTGTAAGAACAACATTGATCATCCAAGAGCCAAGCCTCTCAAAGATTTCAGAACCCTCCAAACACACTACAAGAGGAAGCATGGAATCAAGCCTTTCATGTGCAGGAAGTGTTGCAAGGCCTTTGCTGTGAGAGGTGATTGGAGGACTCATGAGAAGAACTGTGGCAAGCTTTGGTATTGTTCTTGTGGCTCTGATTTCAAGCATAAGAGGTCTCTCAAGGATCATATCAAGGCCTTTGGGAATGGTCACAAGGCTTATGGCATTGATTCTCTTGATCAAGATGATAATGAACCTGGCTCTGAAATTGACCAAGAAAATGATCATCTTTCTAATTCTACTACTCATCATCATCATACTTGA | 957 | 0.4483 | MTNNPYYLNNNGYWFDLNSPSSTYVFGSNHESPPRREALPLLNKLSPSRSTSSRPQDLESSFGAMEVKEKHKRGDDGDESVTVALHLGLPETRSKNMTCEEEVSAASVSQEQEEGGGGGRGSDSNSMNRGQYWIPTPAQILIGPTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLRLPCYCCAPGCKNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCCKAFAVRGDWRTHEKNCGKLWYCSCGSDFKHKRSLKDHIKAFGNGHKAYGIDSLDQDDNEPGSEIDQENDHLSNSTTHHHHT | 318 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Arst8g01585 | 318 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 147 | 174 | IPR013087 | - | |
Arst8g01585 | 318 | MobiDBLite | consensus disorder prediction | 289 | 318 | - | - | |
Arst8g01585 | 318 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 149 | 169 | IPR013087 | - | |
Arst8g01585 | 318 | Gene3D | Classic Zinc Finger | 146 | 169 | - | - | |
Arst8g01585 | 318 | MobiDBLite | consensus disorder prediction | 26 | 80 | - | - | |
Arst8g01585 | 318 | FunFam | Zinc finger protein WIP2 | 200 | 282 | - | - | |
Arst8g01585 | 318 | MobiDBLite | consensus disorder prediction | 92 | 130 | - | - | |
Arst8g01585 | 318 | PANTHER | ZINC FINGER PROTEIN WIP2 | 21 | 307 | IPR043584 | GO:0003700|GO:0010468 | |
Arst8g01585 | 318 | MobiDBLite | consensus disorder prediction | 44 | 59 | - | - | |
Arst8g01585 | 318 | SUPERFAMILY | beta-beta-alpha zinc fingers | 213 | 251 | IPR036236 | - | |
Arst8g01585 | 318 | Gene3D | Classic Zinc Finger | 229 | 306 | - | - | |
Arst8g01585 | 318 | MobiDBLite | consensus disorder prediction | 63 | 80 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Arst8g01585 | Arst-Chr8 | 24976019 | 24977821 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Arst8g01585 | 81 | 309 | C2H2 Transcription Factor Family | AT3G57670 | 69.884 | 5.50e-129 | 371 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Arst8g01585 | None | None | None |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Arst8g01585 | - | - | gmx:100789416 | 427.557 |