Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01585 ATGACAAATAATCCTTACTACTTGAACAACAATGGTTATTGGTTCGACCTTAATTCTCCAAGCAGCACCTATGTTTTTGGTTCCAATCACGAGTCTCCACCGAGAAGAGAAGCGCTTCCTCTCCTGAATAAGCTAAGCCCTAGCAGGAGTACGAGTAGTAGGCCTCAAGATCTGGAATCTTCGTTTGGTGCCATGGAAGTGAAGGAGAAGCACAAGAGAGGAGATGACGGCGATGAGAGTGTGACGGTGGCTTTGCACTTAGGGCTTCCAGAAACAAGAAGTAAGAATATGACATGCGAAGAAGAAGTTTCAGCAGCGTCAGTGTCACAAGAACAAGAAGAAGGAGGAGGAGGAGGAAGAGGTTCTGATTCGAATTCGATGAATCGAGGTCAATATTGGATCCCAACACCGGCTCAGATTCTGATTGGTCCAACACAGTTCTCTTGCCCCCTTTGTTTCAAGACCTTCAACAGATACAACAACATGCAGATGCATATGTGGGGGCATGGATCACAATATAGGAAGGGGCCAGAATCACTAAGGGGAACACAACCAACAGCAATGCTTAGGCTTCCATGCTACTGCTGTGCACCAGGGTGTAAGAACAACATTGATCATCCAAGAGCCAAGCCTCTCAAAGATTTCAGAACCCTCCAAACACACTACAAGAGGAAGCATGGAATCAAGCCTTTCATGTGCAGGAAGTGTTGCAAGGCCTTTGCTGTGAGAGGTGATTGGAGGACTCATGAGAAGAACTGTGGCAAGCTTTGGTATTGTTCTTGTGGCTCTGATTTCAAGCATAAGAGGTCTCTCAAGGATCATATCAAGGCCTTTGGGAATGGTCACAAGGCTTATGGCATTGATTCTCTTGATCAAGATGATAATGAACCTGGCTCTGAAATTGACCAAGAAAATGATCATCTTTCTAATTCTACTACTCATCATCATCATACTTGA 957 0.4483 MTNNPYYLNNNGYWFDLNSPSSTYVFGSNHESPPRREALPLLNKLSPSRSTSSRPQDLESSFGAMEVKEKHKRGDDGDESVTVALHLGLPETRSKNMTCEEEVSAASVSQEQEEGGGGGRGSDSNSMNRGQYWIPTPAQILIGPTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLRLPCYCCAPGCKNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCCKAFAVRGDWRTHEKNCGKLWYCSCGSDFKHKRSLKDHIKAFGNGHKAYGIDSLDQDDNEPGSEIDQENDHLSNSTTHHHHT 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01585 318 ProSiteProfiles Zinc finger C2H2 type domain profile. 147 174 IPR013087 -
Arst8g01585 318 MobiDBLite consensus disorder prediction 289 318 - -
Arst8g01585 318 ProSitePatterns Zinc finger C2H2 type domain signature. 149 169 IPR013087 -
Arst8g01585 318 Gene3D Classic Zinc Finger 146 169 - -
Arst8g01585 318 MobiDBLite consensus disorder prediction 26 80 - -
Arst8g01585 318 FunFam Zinc finger protein WIP2 200 282 - -
Arst8g01585 318 MobiDBLite consensus disorder prediction 92 130 - -
Arst8g01585 318 PANTHER ZINC FINGER PROTEIN WIP2 21 307 IPR043584 GO:0003700|GO:0010468
Arst8g01585 318 MobiDBLite consensus disorder prediction 44 59 - -
Arst8g01585 318 SUPERFAMILY beta-beta-alpha zinc fingers 213 251 IPR036236 -
Arst8g01585 318 Gene3D Classic Zinc Finger 229 306 - -
Arst8g01585 318 MobiDBLite consensus disorder prediction 63 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01585 Arst-Chr8 24976019 24977821 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01585 81 309 C2H2 Transcription Factor Family AT3G57670 69.884 5.50e-129 371
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Arst8g01585 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01585 - - gmx:100789416 427.557