Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01582 ATGGACCATGACAAAACTGGATGCCAAGCTCCCCCAGAAGGTCCTATATTATGCATTAACAACTGTGGATTTTTCGGGAGTCCAGCTACCATGAACATGTGTTCCAAGTGCCACAAGGACATGATGCTGAAACAGGAGCAGGCCAAGCTTGCAGCATCTTCCATAGGAAATCTTATGAATGGGTCATCAAGTAGCAGTGGAAATGAACCTGTTATTGCTGCCAATGTGGATATTCCAGTCAATTCAACAGAACCAAAAGCTATTTCCACGCAACCTTTATCTGCTTCAGTCTCAGAGGAGAGTGGTGAGGCAAAGCCCAAGGACGGTCCAAAACGTTGCAGCAGCTGCAATAAGAGGGTTGGTTTGACAGGATTTAATTGTCGATGTGGTAACCTTTTCTGTGCCGTACATCGCTACTCAGACAAGCATGACTGCCCGTATGATTACCGTACTGCTGCACGGGATGCTATAGCGAAAGCGAACCCAGTTGTGAAGGCCGAGAAGCTTGATAAGATCTAG 519 0.4663 MDHDKTGCQAPPEGPILCINNCGFFGSPATMNMCSKCHKDMMLKQEQAKLAASSIGNLMNGSSSSSGNEPVIAANVDIPVNSTEPKAISTQPLSASVSEESGEAKPKDGPKRCSSCNKRVGLTGFNCRCGNLFCAVHRYSDKHDCPYDYRTAARDAIAKANPVVKAEKLDKI 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01582 172 SMART A20_3 15 39 IPR002653 GO:0003677|GO:0008270
Arst8g01582 172 MobiDBLite consensus disorder prediction 83 98 - -
Arst8g01582 172 Pfam A20-like zinc finger 16 39 IPR002653 GO:0003677|GO:0008270
Arst8g01582 172 FunFam Zinc finger AN1-type containing 6 87 168 - -
Arst8g01582 172 ProSiteProfiles Zinc finger AN1-type profile. 107 153 IPR000058 GO:0008270
Arst8g01582 172 MobiDBLite consensus disorder prediction 83 113 - -
Arst8g01582 172 SUPERFAMILY AN1-like Zinc finger 96 167 IPR035896 -
Arst8g01582 172 Gene3D - 87 168 IPR035896 -
Arst8g01582 172 ProSiteProfiles Zinc finger A20-type profile. 12 46 IPR002653 GO:0003677|GO:0008270
Arst8g01582 172 PANTHER AN1-TYPE ZINC FINGER PROTEIN 13 172 - -
Arst8g01582 172 SMART AN1_Zf_4 113 150 IPR000058 GO:0008270
Arst8g01582 172 Pfam AN1-like Zinc finger 113 149 IPR000058 GO:0008270
Arst8g01582 172 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 17 53 - -
Arst8g01582 172 Gene3D - 4 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01582 Arst-Chr8 24963448 24966167 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01582 8 172 C2H2 Transcription Factor Family AT3G52800 44.509 1.58e-39 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01582 - - qsa:O6P43_000126 307.375