Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01576 ATGACGTGTCCAGCCTCGCCCGAGCTCGATCTCGACAACCTCAAAGCACTCAAAATTCTAGGCAGAGGCGCCATGGGCACCGTCTTCCTCGTCCAAAACACAACCACCGCCACCTATCTTGCTCTCAAGGTGGTCGACAAGTCCTCTGTCGACGCAAAGCCAGACTCCGACCGCCGTGCCCGCTGGGAAACCCAAGTGCTGTCCCGCCTCTCCCACCCCTTCCTCCCTTCCCTCCTCGGCACCTTCGAAACAGACCACTTGCTTGGCTGGGGCGTTCCTTACTGCCCTGGCGGCGACCTCAACGTCCTCCGCCACCGCCAAGTGGACAGCGTCTTCTCCCCCGCCGTCATCCGCTTCTACGTGGCCGAGATCCTCTGCGCTCTCGACCACCTCCACTCCATGGGCATCGCCTACCGCGACCTCAAACCTGAAAACGTCCTCATCCAACAAACCGGCCACGTCACCCTAACTGATTTCGACCTCTCACGCAACCTCACTCTTCCAAAACCGAAAACGGTTCTCATAACTGATCCCAAGGCCTCTAACAGAAAACATGACACGTGTCACCACCAGAGCCAAAAAGGACTGAAGAAGCCTAAGTCCGCGCGAGTCAGTCCTGTTAGTCGCCGCAGGCCGAGTTTTTCCGCCGGAGAAAGGTCGAACTCCTTCGTCGGTACGGAGGAGTACGTGGCTCCGGAGGTGGTTCGCGGCGATGGTCACGAGTTCGCCGTCGATTGGTGGGCCCTAGGGGTGCTGACGTACGAGATGCTGTACGGAAGGACGCCGTTTAAGGGGAAGAACAGAAAGGAGACGTTTCGAAACGTGTTGATGAAGAAGCCTGAGTTCATCGGGAAGCAGACGGTGTTGACGGATTTGATCTCGCGGTTGCTGGAGAAGGAACCTTCTAGAAGATTGGGTTCCGTACGTGGAGCCGATGAGATCAAGGACCATGAGTTTTTCAGAGGTCTCAAGTGGGACCTCCTGACGGCGGAGGTGGTCATGAGGCCGCCGTTTATTCCATCCAGAGATGATGAAGCCCACTTCACGGAGAAACTGACTGGTGGCGGTGCCGCTGGCGGAGTGGACGTAAGGGATTACTTCCAGAGGTTGAAGGCTCCGCAGTCGCCTTCTTGCGAGCTTCACCGGAAGAATGTTTCGTGGGGAGAATTCTGA 1173 0.5729 MTCPASPELDLDNLKALKILGRGAMGTVFLVQNTTTATYLALKVVDKSSVDAKPDSDRRARWETQVLSRLSHPFLPSLLGTFETDHLLGWGVPYCPGGDLNVLRHRQVDSVFSPAVIRFYVAEILCALDHLHSMGIAYRDLKPENVLIQQTGHVTLTDFDLSRNLTLPKPKTVLITDPKASNRKHDTCHHQSQKGLKKPKSARVSPVSRRRPSFSAGERSNSFVGTEEYVAPEVVRGDGHEFAVDWWALGVLTYEMLYGRTPFKGKNRKETFRNVLMKKPEFIGKQTVLTDLISRLLEKEPSRRLGSVRGADEIKDHEFFRGLKWDLLTAEVVMRPPFIPSRDDEAHFTEKLTGGGAAGGVDVRDYFQRLKAPQSPSCELHRKNVSWGEF 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01576 390 Gene3D Phosphorylase Kinase; domain 1 14 98 - -
Arst8g01576 390 SMART serkin_6 14 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g01576 390 SUPERFAMILY Protein kinase-like (PK-like) 11 342 IPR011009 -
Arst8g01576 390 ProSitePatterns Protein kinases ATP-binding region signature. 20 43 IPR017441 GO:0005524
Arst8g01576 390 Gene3D Transferase(Phosphotransferase) domain 1 99 166 - -
Arst8g01576 390 FunFam Serine/threonine-protein kinase OXI1 218 341 - -
Arst8g01576 390 Gene3D Transferase(Phosphotransferase) domain 1 218 341 - -
Arst8g01576 390 FunFam Serine/threonine-protein kinase OXI1 99 167 - -
Arst8g01576 390 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
Arst8g01576 390 ProSiteProfiles Protein kinase domain profile. 14 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g01576 390 Pfam Protein kinase domain 217 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g01576 390 Pfam Protein kinase domain 16 174 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g01576 390 PANTHER FLIPPASE KINASE 1-RELATED 8 345 - -
Arst8g01576 390 MobiDBLite consensus disorder prediction 180 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01576 Arst-Chr8 24889437 24890934 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01576 9 390 AGC Kinase Gene Family AT3G20830 59.314 9.83e-158 448
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Arst8g01576 Pkinase 1.1e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01576 - - cave:132163960 516.924