Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01571 ATGGAGTCAGATCTTCAGGCACCGAGTTCGAACGGGTTGACACGGTACCGATCGGCACCGAGTTCATACTTCACGGACATAATTGACCGCGAATTCTACGAGCACATTTTCAACCGTCCGTCAAGTCCAGAAACAGAGCGAGTCTTCTCCAGGTTCATGAACAGTCTCCGTGACGATGCTGCACCTGAAGACGATTCACTCCATCTCGATTCTTCTTCTGTCAAAGAAGAACACGATATCACTCCCTCGCAACCTCTTCTTTTTCAACACCAGCAGCAGCAGCAGCAGAACAACGTCAATAGCTTCAACTATCAAAGCACGTCGAGACCGCCGTTGCCGAATCAGAATCAGAATCTTGCTTCCTCCGGTGGTGTAGAAGGAGTGTATTCTAATAATAATAATAACAATAATCGGTTGCCGCAGATGAAGAATCAATCTAATCTTGTTAGGCACAGTAGCTCACCTGCTGGACTATTTTCCCAAATTCACATTGAAAATGGGTATGTTGTTGATATGCGAGGGATGGGAACTTTAGGAGCAGTAAATAAGAGTGTGGAAGAAGTGAAGTTCTCTTCTTCAAGGACAAGGAGGTTGAAGAATCCACAGAACTACTCCTCCTCCGCCTCCGGGAGAATGTCTTCAATAGCTGAGATTGGCAACAGGGATAGCAGAGAAGACAATCCAGATGCTGAAGCTTTTGGAGAAACCCACGGCGAGGATTTCATCACGGAGTTCGCGCCCTGGGATGATTCCGTCGCCGTGAATGACATTGTTGCTGGTCTAAAAAGATTCAGAGATGATGATGTGAAGCCATTTTCTTCTGGTTTGAATGCAGCTGAGACTCAGAACGAAAGTAGAGGACAGCAAGCTGCTCCTTTGGCTCATCAAATGAGTTTGCCAAATACTTCAGCTGAAATGGCAGCCATTGAGAAGTTCTTGCAATTTTCAGATTCTGTTCCGTGCAAAATTCGTGCCAAGAGAGGCTGTGCCACTCACCCAAGAAGCATTGCAGAGAGGGTTAGAAGAACTAAAATAAGTGAGCGTATGAGGAAACTACAAGATCTGGTGCCTAACATGGACAAGCAAACAAACACAGCAGACATGTTGGATTTGGCTGTCGATTACATCAAAGACCTTCAAAAGCAAGTTGAGACGCTTTCAGACTGTCAAGCTAAGTGTACGTGTTCTTCCAAGCCACAGCAATAA 1206 0.4561 MESDLQAPSSNGLTRYRSAPSSYFTDIIDREFYEHIFNRPSSPETERVFSRFMNSLRDDAAPEDDSLHLDSSSVKEEHDITPSQPLLFQHQQQQQQNNVNSFNYQSTSRPPLPNQNQNLASSGGVEGVYSNNNNNNNRLPQMKNQSNLVRHSSSPAGLFSQIHIENGYVVDMRGMGTLGAVNKSVEEVKFSSSRTRRLKNPQNYSSSASGRMSSIAEIGNRDSREDNPDAEAFGETHGEDFITEFAPWDDSVAVNDIVAGLKRFRDDDVKPFSSGLNAAETQNESRGQQAAPLAHQMSLPNTSAEMAAIEKFLQFSDSVPCKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKDLQKQVETLSDCQAKCTCSSKPQQ 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01571 401 MobiDBLite consensus disorder prediction 192 212 - -
Arst8g01571 401 MobiDBLite consensus disorder prediction 195 212 - -
Arst8g01571 401 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 329 379 IPR011598 GO:0046983
Arst8g01571 401 FunFam Transcription factor bHLH130 family 330 398 - -
Arst8g01571 401 SMART finulus 335 385 IPR011598 GO:0046983
Arst8g01571 401 Gene3D - 330 398 IPR036638 GO:0046983
Arst8g01571 401 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 332 391 IPR036638 GO:0046983
Arst8g01571 401 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 78 394 - -
Arst8g01571 401 MobiDBLite consensus disorder prediction 59 141 - -
Arst8g01571 401 MobiDBLite consensus disorder prediction 59 77 - -
Arst8g01571 401 Pfam Helix-loop-helix DNA-binding domain 334 380 IPR011598 GO:0046983
Arst8g01571 401 MobiDBLite consensus disorder prediction 84 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01571 Arst-Chr8 24842431 24845369 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01571 6 397 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G51140 40.404 3.41e-73 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Arst8g01571 HLH 5.2e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01571 - - gmx:100805812 493.812