Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01563 ATGGAGAAAAATGGAGTTGTTGACATTGACAAGACCACGGAGACCATGGAACCGGAGAAGTCCACTGGTGGTGGACTTTATGTTCCCGGCAAGGACAGAGTGGTGTACGTGCCTCAAGAAAGAAAATCTCGTTTAGGACTAGATGCCCTTGCGATTGCAAAACGTGAAGGATCTCAAAATGATGGAGTGTTCAAGGTCCCGAAACCAAGGACCATTTCTATTGCAGCATCTGCAGAAGATGTAGATAAGTCTGAGTCTGCTGTCATTGAGGATGAAAGCGGGCTTGGTGGAACTGCTAGTAAAGACAGACGAGCTAATACGAGATACCGGAAATCAACCAATGAATCATCACAAGCAGAAAGTTCTGTGACTGAAGATCATGATGCTGATTCACATGGGACTCGTTCAAAGGAGCATCGGGGTTCAGATGTCCCTGCTTCACCTTCTGGATATGAAAGGGAGAATTATAGGAATGAGAGGAGGCATCACAGAGATGAGTCAAGAAGTGGTAGCAGAAGAGTGCAACATGTAGACAATTTTGAAAGTAAGGAGCCTTATTTTGAGAGGGATTCACGTAGTAGGTATGGCCATGAATACAACAGGAATAGGGAGCGTTATTCTGAGAGGGATTCACGTAGTAGATATGACCATGAGCGCGGTAGAAGTAAGGAGCCTTATTCAGAAAGGGATTCCTGTAGTAGGTATGACCATGAATATGGTAGAAAGCGAAGCAGATATGAGGGTTCCAGGAGAACACCTGGCAGGTCTGACTGGGATGATGGGCAATGGGAATGGGAAGATACTCCTCGAAGGGACAGTGTCTCTAGTTCTAGACATCATCAACCTTCACCATCCCCTATGTTTCTTGGTGCCTCACCTGATGCACGATTGGCTTCTCCATGGTCAGGAGGCAATACTCCTTATTCTTCTTCTCCATGGGACCATGTGTCTCCATCTCCTGTTCCAATACGTGCTTCTGGATCTTCAGTCAAATCTTCTACTTCTAGACATAGTGGAAGGTCCCATCAACTTACTTTTTCTTCAGGAACTTCAAGTTCGTATGAGGATGAAGTGACTGATAAGTCCGAGTTTGGCGAAGAACACAAATATGAGATTACTGAAAGCATGCGTGCAGAGATGGAATATGATGCTGACCGGGCATGGTATGATAGAGAGGAAGGTAGCACAATGTTCGATGGAGGAGATAACTCATCACTTTTTCTTGGAGACGAGGCTACCTTTCAAAAAAAAGAGGCTGAGCTTGCCAAAAGACTGACTAGAAGAGATGGGACCAAGATGTCCCTTGCTCAGAGCAAGAAGTTGTCTCAGCTCACAGCTGATAATGCTCAATGGGAGGACAGACAACTCCTGAGATCAGGAGCCGTTAGAGGTACAGAGGTTCAGACTGAGTTTGATGATGAGGAAGAACGCAAAGTTATTCTTCTGGTGCATGATACAAAACCTCCATTCCTTGATGGCAGAGTTGTTTTTACTAAGCAGGCAGAGCCAATTATGCCAATAAAGGATCCAACATCTGACATGGCTATAATTTCTCGTAAAGGATCTACTCTGGTCAGAGAAATACGTGAGAAACAGAGTTCAAATAAGTCTCGCCAACGTTTTTGGGAGCTTGCAGGCTCAAAACTTGGCGATATCTTAGGTGTTGAAAAGACAGCAGAACAGATTGATGCAGACACTGCTACAGTGGGTGAACAGGGTGAAATAGATTTTAAGGAAGAAGCTAAGTTTTCACAGCATTTGAAAAAGGAAGAGGCTGTGAGTGATTTTGCCAAGTCAAAGAGTATTGCAGAGCAAAGGCAATATCTGCCCATTTTTTCAGTGCGAGATGACCTATTACAGGTAATTCGAGAAAATCAGATCGTCGTAGTGGTTGGAGAAACTGGCTCAGGAAAGACAACCCAATTGACACAGTATCTGCATGAGGATGGCTACACTATAAAAGGTATAGTAGGTTGCACCCAACCCAGGCGTGTGGCAGCTATGAGTGTGGCCAAGAGAGTCAGTGAGGAGATGGAGACAGAGCTGGGTGAGAAGGTTGGCTATGCTATACGGTTTGAGGATGTGACTGGGCCAAATACCATTATAAAGTACATGACAGATGGGGTTCTTCTACGAGAAACACTCAAAGACTCTGATCTAGACAAGTATCGGGTTATTGTCATGGATGAAGCCCACGAAAGATCATTAAACACGGATGTTCTTTTTGGAATATTGAAGAAAGTTGTTGCTCGACGTCGTGATTTTAAGTTGATCGTCACATCAGCAACTCTGAATGCACAGAAATTTTCACATTTCTTCGGAAGTGTGCCAATTTATCATATTCCTGGGAGAACATTTCCTGTGACTACATTATGGAGTAAAACTCCAGTTGAAGATTATGTTGAAGGTGCAGTGAAGCAGGCCATGACAATTCACATTACTAGTCCTCCAGGTGACATTCTTATCTTCATGACTGGCCAAGATGAGATTGAGGCAGCTTGCTACGCCCTTGCAGAAAGAATGGAGCAGATGGTCTCTTCTTCAAAGAAAGCAGTCCCTAAACTCTTGATTCTACCTATATACGGCTAAGATATTCCAGAGAGCTGAAGATGGAGCCCGAAAATGCATCGTTGCCACTAACATCGCTGAGACATCATTGACTGTAGACGGTATCTTCTATGTCATAGACACAGGTTATGGTAAAATGAAGGTGTATAACCCAAGGATGGGTATGGATGCTCTTCAAGTCTTCCCCGTCAGCCGTGCTGCTGCTGATCAGCGTGCTGGTCGAGCTGGTAGAACTGGGCCTGGTACATGTTATCGACTGTACACAGAGAGTGCTTACCTAAATGAAATGTTGCCCAGTCCTGTCCCCGAGATTCAAAGGACCAACCTCGGCAATGTGGTCTTGTTGCTGAAATCTCTTAAAGTTGATAATTTACTTGATTTTGATTTCATGGACCCACCTCCGCAAGATAATATTCTCAATTCTATGTACCAGTTGTGGGTATTGGGTGCCCTTAACAATGTGGGTGCCTTAACAGATCTTGGCTGGAAAATGGTTGAGTTTCCACTGGACCCTCCACTTGCCAAGATGCTTTTGATGGGTGAACAGCTAGGGTGCCTTGAGGAGGTTCTGACAATTGTTTCCATGCTTTCAGTACCGTCAGTTTTCTTTAGACCCAAGGACCGAGCAGAGGAGAGTGATGCTGCACGCGAAAGATTTTTTGTGCCAGAATCTGATCACTTAACCCTGTACAATGTCTATCAGCAATGGAAACAGCATGATTACAGAGGTGACTGGTGTAATGATCATTTTTTGCATGTTAAAGGTCTAAGAAAAGCCAGAGAGGTGAGATCCCAGCTGCTTGATATTCTCAAGACACTGAAGATCTCTCTAACCACCTGTTGGCCTGATACAGACATAGTCAGAAAAGCAATTTGCTCAGCATACTTCCACAATGCAGCAAGATTAAAGGGTGTTGGAGAGTATGTCAACTGCCGGACTGGGATGCCATGTCATCTACACCCCAGTAGCGCACTCTATGGCATGGGTGCAACTCCGGAGTATGTGGTTTATCATGAGTTAATCCTAACCACGAAGGAGTATATGCAATGTGCTACAGCCGTGGAGCCCCAGTGGTTGGCTGAGCTTGGACCCATGTTTTTCTCTGTTAAGGAGTCTGATACATCATTGCTGGAGCATAAGAAGAAACAGAAACAAGAGAAGACGGCCATGGAGGAGGAGATGGAGAATTTGAAGAAGATGCAAGCAGAGATTGAGAGAAAACAGAAGCAGGAGGAGAAAGAAAAGTTGGCTAAGCAGCAACAGCAAGTCTCCATGCCAGGTTTGAAAAAGGGCTCTTCCACATATTTGAGGCCAAAGAAACTTGGTTTGTAA 3901 0.446 MEKNGVVDIDKTTETMEPEKSTGGGLYVPGKDRVVYVPQERKSRLGLDALAIAKREGSQNDGVFKVPKPRTISIAASAEDVDKSESAVIEDESGLGGTASKDRRANTRYRKSTNESSQAESSVTEDHDADSHGTRSKEHRGSDVPASPSGYERENYRNERRHHRDESRSGSRRVQHVDNFESKEPYFERDSRSRYGHEYNRNRERYSERDSRSRYDHERGRSKEPYSERDSCSRYDHEYGRKRSRYEGSRRTPGRSDWDDGQWEWEDTPRRDSVSSSRHHQPSPSPMFLGASPDARLASPWSGGNTPYSSSPWDHVSPSPVPIRASGSSVKSSTSRHSGRSHQLTFSSGTSSSYEDEVTDKSEFGEEHKYEITESMRAEMEYDADRAWYDREEGSTMFDGGDNSSLFLGDEATFQKKEAELAKRLTRRDGTKMSLAQSKKLSQLTADNAQWEDRQLLRSGAVRGTEVQTEFDDEEERKVILLVHDTKPPFLDGRVVFTKQAEPIMPIKDPTSDMAIISRKGSTLVREIREKQSSNKSRQRFWELAGSKLGDILGVEKTAEQIDADTATVGEQGEIDFKEEAKFSQHLKKEEAVSDFAKSKSIAEQRQYLPIFSVRDDLLQVIRENQIVVVVGETGSGKTTQLTQYLHEDGYTIKGIVGCTQPRRVAAMSVAKRVSEEMETELGEKVGYAIRFEDVTGPNTIIKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLNTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSHFFGSVPIYHIPGRTFPVTTLWSKTPVEDYVEGAVKQAMTIHITSPPGDILIFMTGQDEIEAACYALAERMEQMVSSSKKAVPKLLILPIYSQLPADLQAKIFQRAEDGARKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPRMGMDALQVFPVSRAAADQRAGRAGRTGPGTCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVLLLKSLKVDNLLDFDFMDPPPQDNILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLEEVLTIVSMLSVPSVFFRPKDRAEESDAARERFFVPESDHLTLYNVYQQWKQHDYRGDWCNDHFLHVKGLRKAREVRSQLLDILKTLKISLTTCWPDTDIVRKAICSAYFHNAARLKGVGEYVNCRTGMPCHLHPSSALYGMGATPEYVVYHELILTTKEYMQCATAVEPQWLAELGPMFFSVKESDTSLLEHKKKQKQEKTAMEEEMENLKKMQAEIERKQKQEEKEKLAKQQQQVSMPGLKKGSSTYLRPKKLGL 1307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01563 1307 Gene3D - 558 784 IPR027417 -
Arst8g01563 1307 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 619 782 IPR014001 -
Arst8g01563 1307 Pfam Helicase conserved C-terminal domain 814 943 IPR001650 -
Arst8g01563 1307 CDD SF2_C_RHA 786 951 - -
Arst8g01563 1307 FunFam Pre-mRNA-splicing factor ATP-dependent RNA helicase 785 963 - -
Arst8g01563 1307 Gene3D - 785 962 IPR027417 -
Arst8g01563 1307 Pfam DEAD/DEAH box helicase 618 768 IPR011545 GO:0003676|GO:0005524
Arst8g01563 1307 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 796 984 IPR001650 -
Arst8g01563 1307 MobiDBLite consensus disorder prediction 1269 1307 - -
Arst8g01563 1307 FunFam Pre-mRNA-splicing factor ATP-dependent RNA helicase 966 1009 - -
Arst8g01563 1307 Coils Coil 1241 1286 - -
Arst8g01563 1307 SMART ultradead3 607 800 IPR014001 -
Arst8g01563 1307 FunFam pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH7 562 784 - -
Arst8g01563 1307 FunFam Pre-mRNA-splicing factor ATP-dependent RNA helicase prp16 989 1090 - -
Arst8g01563 1307 MobiDBLite consensus disorder prediction 302 355 - -
Arst8g01563 1307 Pfam Oligonucleotide/oligosaccharide-binding (OB)-fold 1151 1228 IPR011709 -
Arst8g01563 1307 Pfam Helicase associated domain (HA2) 1006 1092 IPR007502 GO:0004386
Arst8g01563 1307 MobiDBLite consensus disorder prediction 153 277 - -
Arst8g01563 1307 MobiDBLite consensus disorder prediction 1 17 - -
Arst8g01563 1307 PANTHER ATP-DEPENDENT RNA HELICASE 560 1251 - -
Arst8g01563 1307 Gene3D - 988 1145 - -
Arst8g01563 1307 MobiDBLite consensus disorder prediction 77 366 - -
Arst8g01563 1307 MobiDBLite consensus disorder prediction 121 142 - -
Arst8g01563 1307 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 602 1140 IPR027417 -
Arst8g01563 1307 SMART helicmild6 839 943 IPR001650 -
Arst8g01563 1307 SMART ha2_5 1004 1094 IPR007502 GO:0004386
Arst8g01563 1307 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01563 Arst-Chr8 24685984 24693605 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01563 K12815 - gmx:100817761 2176.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g01563 8 24685984 24693605 Arst3g00366 3 2664154 2667418 PCT
Arst3g00367 3 2677148 2679736 Arst8g01563 8 24685984 24693605 PCT