Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01561 ATGGCGAATTCTTCAGATTCCATTGTGGAAGACACAATGGAATCTGATAAGGAACTTGCAAGGCAGACTTATGAAGTGGTTGAGCAGTTCTTGAAGCCTTTGAGGGAAGCCGGTTATCCGGAGCTGAGGCCGTTGCTTTGTATTGGTGAGATGGACACGAGATCACAGGTGGATATTGTGAAGAAGGGTGTTCACATTGTTGTTGCCACTCCTGGAAGATTGAAGGATTTGCTGGCAAAGAAGAAGATGAATCTTGATAGTTGTAGGTACTTGACTCTGGATGAGGCTGATAGGTTGGTGGATTTGGGGCTTGAGGATGACATTAGAGAAGTCTTTGATCACTTGAAAGCTCAGAGGCAAAGCCTTTTCTTCTCTGCCACCATGCCAACCAAAATCCAGAACTTCGCAAGGAGCGCTTTGGTGAAGCCAGTTATGGTGAATGTGGGGAGGGCAGGGGCTGCAAATCTTGATGTGATTCAGGAGGTAGAGTATGTCAAGCAGGAGGCTAAGATAGTGAATCTCCTCGAGTGCCTCCAGAAAACCCCACCACCTATTTCGGTGTTCTGCGAAAACAAGGCTGATGTGCAGGGATGGTTCTAA 600 0.47 MANSSDSIVEDTMESDKELARQTYEVVEQFLKPLREAGYPELRPLLCIGEMDTRSQVDIVKKGVHIVVATPGRLKDLLAKKKMNLDSCRYLTLDEADRLVDLGLEDDIREVFDHLKAQRQSLFFSATMPTKIQNFARSALVKPVMVNVGRAGAANLDVIQEVEYVKQEAKIVNLLECLQKTPPPISVFCENKADVQGWF 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01561 199 Gene3D - 15 152 IPR027417 -
Arst8g01561 199 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 17 149 IPR027417 -
Arst8g01561 199 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 17 195 - -
Arst8g01561 199 SMART ultradead3 1 161 IPR014001 -
Arst8g01561 199 Pfam DEAD/DEAH box helicase 14 134 IPR011545 GO:0003676|GO:0005524
Arst8g01561 199 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 17 146 IPR014001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01561 Arst-Chr8 24667840 24675311 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01561 23 194 Eukaryotic Initiation Factors Gene Family AT1G72730 33.708 1.12e-20 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01561 K13116 - adu:107461367 393.66