Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01546 ATGAACAATAGTTTCAATCAGCACAAGATGATGTGTTATAAGCGCAAAAGAGCTCTGAAGACTACATCGACCCCTGGACGTGAAGGTCTAAGACCTAGCCATTTGACAAGGGCTACTGTAGGGCAACAATTGATTTCGGAATCAGATGATAAACAGGAACTTGCAGAAGAGAAGAAGGTTGGGAAAGATGAAACAGAAAATGGAAATGTTGATGGTGAGAATGAGATTGATGAAGATGTTGAGGATGTAGGAAATGAAGATGGTGATGATGAAGGTGGCAAAGAAGAGCAGGTTGGGAGAAGACGTTACGATCTTCGGAATCGTCCAGATGTCCGCAGGTCCTCCATGGCAGAATGTAAGATCCAACCGAGATCTCCACAAAGAGTGCTACATCAAGGCATGGGCACTAAGGTTAAAAAGGGTGTAAAGAAGGGTGGATCACGAGTGCAGAAGCGTTGTTGGTTAAGGCCTGCATATTCTGATGATTCCCGTATTGTGGATGAGCTGAACCAATATCCTGCTATTCCATGGGGTCATGGGGACAGCAGACCTTGCCAACCATGGCTTTTTGGAGGATTAGACATGCATGGGATAACAACTTGGGGATTAAATGTTGCTGCCTCAGGTTGGGTTCATGAAGGAGATGCTTTTTCCACCTCGGTAACTGGGGTTCAAACTGCTGGACCAAGCTCTAAGGGTGGGGCAGATATCCAACCTTTGCAGGTCGTCGATAGTGCCAGTTTTGATGATATAGGGGGGCTCTCTGAGTACATTGATGCTTTGAAGGAAATGATTTTCTTTCCCTTGTTGTATCCCGAATTCTTTGCAAGTTATCATATCACACCACCTAGGGGGGTGTTGTTATGTGGCCCCCCTGGCACAGGCAAAACTTTGATTGCAAGAGCTCTGGCTTGTGCTGCTTCAAAAGCTGGCCAGAAGGTCAGCTTTTACATGCGCAAAGGAGCAGATGTGCTAAGCAAATGGGTTGGTGAGGCTGAAAGACAACTGAAACTACTTTTTGAAGAAGCTCAAAAGAACCAACCTTCTATCATATTCTTTGATGAAATAGATGGACTTGCACCTGTGAGGTCTAGCAAGCAAGAGCAGATTCATAATTCCATTGTTTCCACCTTGCTAGCTTTGATGGACGGTCTTGATTCTCGTGGACAAGTTGTTCTGATTGGAGCCACCAACAGGATTGATGCCGTTGATGGAGCCTTGCGGCGCCCTGGTAGATTTGATCGGGAATTTAAGTTTCCATTGCCTGGTTGTAAGGCACGTTCTGAAATATTAGACATCCACACACGCAAGTGGAAACATGCTCCTTCAAATGAACTGAGAATGGAACTTGCATCTAGTTGTGTAGGATATTGTGGTGCCGACCTAAAGACCCTCTGTACTGAAGCTGCTATTTGTGCATTTCGTGAAAAATATCCACAAGTCTATACTAGTGATGACCAATTTCTCATAGATGTTGATTCAGTCAAGGTTGAAAAGTATCACTTTACTGAAGCTATGTCAACAATTACTCCTGCTGCTCATAGGGGTGCAATTGTGCACTCTAGGCCATTGTCTCTAGTTGTTCGACCATGTCTTCGCAGGCATCTAGAGGCAGCCATGGGTATTGTATCTGATATTTTCCTTCCAGTTTCAGTTGCATCAGAATTTATTAAACAATCAACGCATTCCTTTGGGCGCGCAATTCCACTTGTGTATCGACCTAGACTTCTACTTTGTGGAAGTGAAGGTACTGGGCTGGATCATCTTGGGCCTGCAGTTTTACATGAACTGGAAAAGTTTCCTGTTTTTTCATTAGGTATTTCAGTTCTTGTATCAGATTCAAGTGCAATAACACCAGAGGAGGCATTGATTCATATATTTAATGAAGCTAGACGAACAATACCGTCAATTCTCTATTTACCACAGTTTGATGTGTGGTGGGAAACTGCACATGAACAGCTCCGGGCTGTTCTCCGAACCTTACTAGAAGAATTGCCATCTGACTTGCCTATATTACTGTTTGGAACATCATCAGTCCAGCTTGCTGAAGTTAAAGAAGTGCCTATTTCAGTTTTCCCTCATGATTCAGTTTATCAAGTGAACATACCATCAGCCGAAGATAGGATGCTGTTTTTTAATGATTTAGTGGAAGCTGTTTTGTCGGTCTTTTCTGGGATAATGAACAAGAAACCCCTGGACACAGGATGCTTTTCTGAACTTCCCAAGGCACCTAAACTAGCAAGTGGTCCAAAGGCATCCGAACTTAAAGCAAAGGTGGAAGCTGAGCAACATGCACTCCGCAGATTGCGAATGTGCCTTAGAGATGTTTGTAACAAGATATTATATGACAAGCGATATAATCTCTTCCATTATCCAGTCTCAGACGAAGATGCTCCTAATTATCACTCAATTATCCAGAACCCGATGGACATGGTAACCATGTTACAGCGTGTTGATAATGGCTGGTATATTACACGTTCTACATTCCTACAGGACATTGATCTTATTGTTTCCATTGCAAAGGTTTACAATGGAGAGGATTACAACGGTGCTCGGATTGTGAGTAGAGCTTGTCAGCTCCGTGATGTGGTGCATGGGATGATCTCACAGATGGATCCAGCATTAGTTGCATACTGTGACAAGATTGCTGCCCAAGGTGGCCCGGTTCATTTGTCTAATGAATTAAGGGGGTCTACATTCCCTGCTACTCCCGTTGTACAACTGGGAACTGCCACTAGATTGAGTGCTCGACTTCGTAATGTCGAACCAGAGGTTAGTGTGGATCAGAGCTATGAAGCATTGAAGCACACTAAGAAGAGTTCTGATGTTGCACGTGGAGCAAAAGATAAGTCAGGACAAGAGCCTTTACCATCCAAGAGTCAAACCCAATCAACTGATGAGAATTTGCATGGAACGGGTACAAATGAAAGTGTTCATGGTAGCAGTCTTGAAGACGCCACGATATCAGATACTGAACTTTCAACAAGATTGCAGTCTATTAAGCAGCTTTTTGTCGAGCGCAGCGACGGTTACAGCATTCCACAGCTCGAACAGCTCTACTCAAGAATCATGAAGAGGGTTTCCCAAACCAAACTTGATTGCAAGACCTCAGCTGTGAGTTTTTTATTAAACTTTGTTGAGGATGGTGCAAATTTTTAA 3159 0.4359 MNNSFNQHKMMCYKRKRALKTTSTPGREGLRPSHLTRATVGQQLISESDDKQELAEEKKVGKDETENGNVDGENEIDEDVEDVGNEDGDDEGGKEEQVGRRRYDLRNRPDVRRSSMAECKIQPRSPQRVLHQGMGTKVKKGVKKGGSRVQKRCWLRPAYSDDSRIVDELNQYPAIPWGHGDSRPCQPWLFGGLDMHGITTWGLNVAASGWVHEGDAFSTSVTGVQTAGPSSKGGADIQPLQVVDSASFDDIGGLSEYIDALKEMIFFPLLYPEFFASYHITPPRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQKNQPSIIFFDEIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRIDAVDGALRRPGRFDREFKFPLPGCKARSEILDIHTRKWKHAPSNELRMELASSCVGYCGADLKTLCTEAAICAFREKYPQVYTSDDQFLIDVDSVKVEKYHFTEAMSTITPAAHRGAIVHSRPLSLVVRPCLRRHLEAAMGIVSDIFLPVSVASEFIKQSTHSFGRAIPLVYRPRLLLCGSEGTGLDHLGPAVLHELEKFPVFSLGISVLVSDSSAITPEEALIHIFNEARRTIPSILYLPQFDVWWETAHEQLRAVLRTLLEELPSDLPILLFGTSSVQLAEVKEVPISVFPHDSVYQVNIPSAEDRMLFFNDLVEAVLSVFSGIMNKKPLDTGCFSELPKAPKLASGPKASELKAKVEAEQHALRRLRMCLRDVCNKILYDKRYNLFHYPVSDEDAPNYHSIIQNPMDMVTMLQRVDNGWYITRSTFLQDIDLIVSIAKVYNGEDYNGARIVSRACQLRDVVHGMISQMDPALVAYCDKIAAQGGPVHLSNELRGSTFPATPVVQLGTATRLSARLRNVEPEVSVDQSYEALKHTKKSSDVARGAKDKSGQEPLPSKSQTQSTDENLHGTGTNESVHGSSLEDATISDTELSTRLQSIKQLFVERSDGYSIPQLEQLYSRIMKRVSQTKLDCKTSAVSFLLNFVEDGANF 1052
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01546 1052 ProSiteProfiles Bromodomain profile. 789 851 IPR001487 GO:0005515
Arst8g01546 1052 SMART AAA_5 282 423 IPR003593 GO:0016887
Arst8g01546 1052 ProSitePatterns AAA-protein family signature. 391 409 IPR003960 GO:0005524|GO:0016887
Arst8g01546 1052 PANTHER AAA DOMAIN-CONTAINING 34 883 IPR045199 -
Arst8g01546 1052 PANTHER AAA DOMAIN-CONTAINING 34 883 IPR045199 -
Arst8g01546 1052 PRINTS Bromodomain signature 832 851 IPR001487 GO:0005515
Arst8g01546 1052 PRINTS Bromodomain signature 798 814 IPR001487 GO:0005515
Arst8g01546 1052 PRINTS Bromodomain signature 814 832 IPR001487 GO:0005515
Arst8g01546 1052 CDD RecA-like_Yta7-like 250 419 - -
Arst8g01546 1052 SUPERFAMILY Bromodomain 762 878 IPR036427 GO:0005515
Arst8g01546 1052 Gene3D - 549 715 IPR027417 -
Arst8g01546 1052 FunFam ATPase family AAA domain-containing protein 2B 422 507 - -
Arst8g01546 1052 MobiDBLite consensus disorder prediction 929 949 - -
Arst8g01546 1052 Pfam Bromodomain 774 847 IPR001487 GO:0005515
Arst8g01546 1052 MobiDBLite consensus disorder prediction 954 987 - -
Arst8g01546 1052 FunFam ATPase family AAA domain-containing protein 758 886 - -
Arst8g01546 1052 FunFam ATPase family, AAA domain-containing 2 244 428 - -
Arst8g01546 1052 MobiDBLite consensus disorder prediction 70 92 - -
Arst8g01546 1052 Pfam ATPase family associated with various cellular activities (AAA) 286 421 IPR003959 GO:0005524|GO:0016887
Arst8g01546 1052 Gene3D - 758 886 IPR036427 GO:0005515
Arst8g01546 1052 Gene3D - 422 507 - -
Arst8g01546 1052 SMART bromo_6 766 873 IPR001487 GO:0005515
Arst8g01546 1052 MobiDBLite consensus disorder prediction 927 987 - -
Arst8g01546 1052 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 570 785 IPR027417 -
Arst8g01546 1052 MobiDBLite consensus disorder prediction 49 69 - -
Arst8g01546 1052 Pfam AAA+ lid domain 449 485 IPR041569 -
Arst8g01546 1052 MobiDBLite consensus disorder prediction 14 103 - -
Arst8g01546 1052 CDD Bromo_AAA 766 876 - -
Arst8g01546 1052 Gene3D - 245 514 IPR027417 -
Arst8g01546 1052 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 246 510 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01546 Arst-Chr8 24451537 24459071 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01546 234 486 Calmodulin-binding Proteins AT3G56690 36.502 3.15e-42 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01546 K22531 - gmx:100787765 1524.61