Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01532 ATGGAGCTCGGGATTGATGGCTCCATTAATGGTGAGACAATAGCACATGCTACCATAGGAGAAGTTAGCAGTAGCTTTGTTGATGAAGATAAAATTGCTAGCTGTTCCTTTGATCCAGCTTACAAACAAGATCAAGATGGTAATATAACACAAGATTCTTCTGTTTGCAACAAAGAGGGTTACAGAATGCCCGATAAGCGTGAAAAAATTGTAAGGCAAAGGGCAGAGACAAGGGTTGGTTGCAGGGCAATGATTTTGGTGAGGAAAGTTAGTTCCGGTAAATGGGTTGTCACAAAGTTTGTAAAGGAGCACACACACCCTTTGACACCTGGAAAAGGCAGAAGGGATTGCATTTATGAACAATATCCGAATGAACATGATAAAATTCGAGAACTATCTCAGCAATTGGCTATAGAGAAAAAACGGTGTGCAGCTTATAAAAGGCAACTTGAATTGTTATTTGAACACATTGAGGAGCATAATAATAGTCTTTCAAAGAAAATACAGCACATAGTAGGCAATGTGAAGGAGATTGAAGCTGAAGAACAACAGCGTCATAGATAG 564 0.3936 MELGIDGSINGETIAHATIGEVSSSFVDEDKIASCSFDPAYKQDQDGNITQDSSVCNKEGYRMPDKREKIVRQRAETRVGCRAMILVRKVSSGKWVVTKFVKEHTHPLTPGKGRRDCIYEQYPNEHDKIRELSQQLAIEKKRCAAYKRQLELLFEHIEEHNNSLSKKIQHIVGNVKEIEAEEQQRHR 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01532 187 Pfam FAR1 DNA-binding domain 41 109 IPR004330 -
Arst8g01532 187 Coils Coil 129 149 - -
Arst8g01532 187 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 42 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01532 Arst-Chr8 24407607 24409926 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Arst8g01532 FAR1 6.6e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01532 - - adu:107461550 381.333
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g01532 8 24407607 24409926 Arst8g01532 8 24407607 24409926 ECH
Arst8g01532 8 24407607 24409926 Arst3g00502 3 3473715 3476066 PCT