Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01525 ATGGCACTCAATACATACGTGAATGGAGATGCACTTCAAAATTCAATAATATCAGAAATTTTCACCACCAATTTTCATGAACTAACTGCACCAAAAGAACTTACACCTGACTATTATTACCACCAACACAACCAAGAAGGCTTGTTTCCTAATAACTTTTTCTTTGACCCTTATTTTGACCTTAACAATGGATTTTTCCATCCTGAAATTTTGTCTTATCATCAACTTGGTCTTAGTTGCACTTCTTCTCATGACCTATTTATCTCACCCAATAAGACTGAATACTCTAATGTCAATACTATTTTTTCATCTCCCAAACGCCAAAAGTACTTTCACAAGGATGAGGATGAAGAACGCCAACTGCCTCCTCCATTCAAGGAGTATTCATCGCCCAACCTATTTGATGGGTTTACAATGAATTCATCTTCTCTGTTACCATCAGAAGGAGCTGCACTACCAGAAGAACTACTATTACCCGCAGCAGTAGCAACACCGTCATCAGACTTCATGGTTCCTAATGTTGTACTCAATAGTTTTTGTGTGGGAATTAATAATGACAGTAAGAAGAAGAAGAACAGTGAGAGAACTATCTCTGCACAAAGCATAGCGGCAAGGGAGAGGAGAAGGAAGATCACAGATAAGACACAAGAGCTTGGAAAGTTGGTTCCTGGTGGATCAAAGATGAACACAGCTGAGATGCTCCATGCAGCTTCTAAATATGTGAAGTACCTTCAAACTCAAATTGGTATGCTTCAACTTATGAACACACTCCAGAAAGAAGATGAGGTTGCTCCTCCAAGTGAAGATCTACGTGCTCTTATTACTTCTCCCTGTGTTCAAGAGAATCTTTATTCTGAGGAACTATGCTTTGTCCCTAAAGACTTTGTTACAGCTTTGACAAATCAGCGTGATATTCGATCAAAGCCTACCATCTTTAAGGATCTTAAAGAGTTGATTGAAACAAACAATGTGCAGAAGAAAGCATAG 987 0.387 MALNTYVNGDALQNSIISEIFTTNFHELTAPKELTPDYYYHQHNQEGLFPNNFFFDPYFDLNNGFFHPEILSYHQLGLSCTSSHDLFISPNKTEYSNVNTIFSSPKRQKYFHKDEDEERQLPPPFKEYSSPNLFDGFTMNSSSLLPSEGAALPEELLLPAAVATPSSDFMVPNVVLNSFCVGINNDSKKKKNSERTISAQSIAARERRRKITDKTQELGKLVPGGSKMNTAEMLHAASKYVKYLQTQIGMLQLMNTLQKEDEVAPPSEDLRALITSPCVQENLYSEELCFVPKDFVTALTNQRDIRSKPTIFKDLKELIETNNVQKKA 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01525 328 SMART finulus 201 250 IPR011598 GO:0046983
Arst8g01525 328 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 109 292 IPR045843 GO:0003700|GO:0006355
Arst8g01525 328 CDD bHLH_AtbHLH_like 200 252 IPR045239 -
Arst8g01525 328 Gene3D - 191 264 IPR036638 GO:0046983
Arst8g01525 328 Pfam Helix-loop-helix DNA-binding domain 201 245 IPR011598 GO:0046983
Arst8g01525 328 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 195 244 IPR011598 GO:0046983
Arst8g01525 328 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 193 256 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01525 Arst-Chr8 24337710 24340040 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01525 163 322 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G30670 45.000 1.36e-32 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Arst8g01525 HLH 1.3e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01525 - - aip:107610272 516.924