Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01508 ATGCCAAGAACCCAATCACCTAAAATTGACGGCTTTAAAGAAGTAGAAGGCCTTAAAGAAGTAGAAGGTTTGGGAAGACCTGTCACTCTTGAGCTGATAGTGTATCCCGGAGAGGATGTGGTCGCAAAGCTATTGAAGCTTTGGAAAGCAAGCAATTACTCTAGCTATGTAGTTTCAGCCTCTGGTCATATATCAAAAGCCGCAATTGGCAAACCAAGCTCAGATATGTTTCATATATATGATGGACACTTTGAGATTCTGTCTTTGTCTGGAAGTTGTTGTGTGAATCAAGAAGATGGATATGCAGATTGGAGTCTGGGCATCACTTTGGCTGATTCTGATAGTGATAGAGAGGCTTTTGGTGGCACCTTCATCAATACATTAATAGCTTCTGGCACTGTATCTGTTGGTATATTGAACTTTGTGAAAGAAGAGGAAAAGAGCACCGAGAAAAACTGCGATGAAACTGGAATGTTTTTTGAGAAGAAGAAGCAGGGGAAGAGAATCAAGAGGTCTTCATCTTCTGCCAAGGATAAAAAAATTGATGGCCTTAAAGAAGTAAAAGTTTCTGGAAGCAGGCCTATCCTTTTTGAGTTGACTGTGTATCCCGGACAGGATGTGGTCGCAAAGCTATGGAAGTTTTGGGAAGCAAGCAATCGATCTAGCTATATAATTTCAGCTTCAGGTCATATATCAAAAGCTGCAATTGGCAAACCAAGCTCAGATATGTTTCATATATATGATGGACATTTTGAGATTCTGACTCTCTCTGGAAGTTGTGTGAATGAAGAAGATGGTTCTACAGATTGGTATTTGGGCATCACACTAGCTGATTCTGATAGTGACATAGAGGCTGATTCTGATAGTGACATAGAGGCATTTGGTGGCAGCTCCATCAATACATTGATAGCTTTTGACACTATATCTCTTCTTATGCTGAACTTTGTGAAAGAAGAGGAAAAGAGCACCGAGAAAAACTGCGATGAAACTGGAACTTCTGCTAAGTCTTCCTCTACAACTGGTGGTGTGCTGATGTCCCTGCTCCTTGCCCTTGGGAAGAAAATAATGGGATTCTTTTCGAATCCGATGGTCAACGAGAGTGATAAGGAAAAACTAATTTGA 1122 0.4073 MPRTQSPKIDGFKEVEGLKEVEGLGRPVTLELIVYPGEDVVAKLLKLWKASNYSSYVVSASGHISKAAIGKPSSDMFHIYDGHFEILSLSGSCCVNQEDGYADWSLGITLADSDSDREAFGGTFINTLIASGTVSVGILNFVKEEEKSTEKNCDETGMFFEKKKQGKRIKRSSSSAKDKKIDGLKEVKVSGSRPILFELTVYPGQDVVAKLWKFWEASNRSSYIISASGHISKAAIGKPSSDMFHIYDGHFEILTLSGSCVNEEDGSTDWYLGITLADSDSDIEADSDSDIEAFGGSSINTLIAFDTISLLMLNFVKEEEKSTEKNCDETGTSAKSSSTTGGVLMSLLLALGKKIMGFFSNPMVNESDKEKLI 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01508 373 CDD DUF296 193 283 IPR005175 -
Arst8g01508 373 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 32 168 IPR039605 GO:0003680
Arst8g01508 373 SUPERFAMILY AF0104/ALDC/Ptd012-like 32 143 - -
Arst8g01508 373 ProSiteProfiles PPC domain profile profile. 191 338 IPR005175 -
Arst8g01508 373 Pfam Plants and Prokaryotes Conserved (PCC) domain 34 142 IPR005175 -
Arst8g01508 373 Pfam Plants and Prokaryotes Conserved (PCC) domain 199 280 IPR005175 -
Arst8g01508 373 SUPERFAMILY AF0104/ALDC/Ptd012-like 197 316 - -
Arst8g01508 373 CDD DUF296 32 136 IPR005175 -
Arst8g01508 373 ProSiteProfiles PPC domain profile profile. 22 164 IPR005175 -
Arst8g01508 373 Gene3D - 31 164 - -
Arst8g01508 373 Gene3D - 196 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01508 Arst-Chr8 24150151 24153021 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01508 199 358 AT-hook Motif Nuclear Localized (AHL) Family AT3G04590 28.395 3.19e-12 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01508 - - adu:107461351 704.131