Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01498 ATGGAACCATACCCTTATTCTCCCAAGAGAAGTGGAGCCTCGTATTGGGGATCTTGTAGAGTTCAATTGGAGGGATCAACATCATTAGATGGTGATATGAGCAATTCAATTTCAGATGATATGGCTTGTAGCTTCTCCGGGCTCATGAATTTTGATCCTTATGCCGGCTTGTACAATAGCCCATCGATAACTGATCAGGTTTTCAACAATGGCCTTCCATCATCATATCCGTCTACCCCTGGGTTCAATCTAGAGGAAAACAATAGTAGCCAATTCTTCAGGACAGAAATGAATGGATATTTCAACACTAAACAAGGCTCCCCTGGTTATGGGGAGAAAATTGCGTTTCAACAAATGGACACCTTACTTGGTTTTTTTGATGGCACAGATGATACACATAGTTTAAGTTCTATGCAAAAAATTAATGGCTCTTCTCAACACCTTGATGCCATTGGCAGTTATATCATGTCCAAGCCAGCTAGTTTGTCACTTGATGAGAGAATGTTGAAAGCCTTGTCCGTCTTTAAGGAATCAGCTGGTGGTGGAATATTGGCACAGGTTTGGGTTCCTATAAAGGATGGTGATCAATTCTTCTTGACCACAAGTGAACAGCCTTATTTACTAGACCAAATTCTTGCCGGATATCGTGAAGTGTCAAGAACATACACATTTTCTACTGAAGGAAAACCGGGTTCTCTCCCAGGACTTCCTGGTCGTGTGTTTATGTCCAAAACTCCTGAGTGGACTTCCAACATTGGTTATTACAATAAGAATGAGTACTTGAGGATGGATGATGCGATTAATCATGAGGTTCGTGGATCAATTGGTTTACCCATATCTGATCTGCACTCTGAACTGCCATGTTGTGCTGTACTGGAACTTGTCACTACAAATGAAAAGCCTGATTTTGAGAAGGAAATGGATATTGTTTGTCATGCACTACAGAATGTAGATCTAACGGCTAATATGCCTCCTCGACTTCTTCCTCAGTGTCTTTCAAACAGCAAACGTGCTGCTTTGACGGCCATAGTTGATGTCTTACGATCCGTTTGTCATGCGCATAGATTGCCAATAGCACTGACATGGATTCCTTGTTGTGTCGCTGAAGACGCAGAAGGTAAAGATACAAAGATACACATTAAAGAGGGTCATTCGAGTCCTCGTGAAAAGAACATACTATGCGTTGAAGAATCAGCATGCTATGTAACTGATAAAGCAATGGAAGGATTTGTTCATGCTTGCATTGAACACCATCTTCAGGAAGGGAAAGGTATAGCTGGGAGAGCTCATCAATCAAATCATCCTTTCTTTTGTCCTGATGTGAAGGCCTATAATATTAGTGAATATCCACTTGTTCATCATGCGCGCAAGTACAATCTGAATGCTGCAGTTGCAATTAGGCTGAGGAGTACTTATACTAATGATGATGATTACATACTGGAATTCTTTTTGCCTGTAAACATGAAAGGGAGCTCAGAACAGCAACTTCTCTTAGACAACCTCTCAGGTACCATGCAGAAAGTTTGTAGGAATTTAAGAACAGTTTCAGATGAGGAATTATCAAGAATGAAAGGCTCACATGTAGGATTTAAAAACAAAAATGTCCCTAGAATTTTTCCTATGTCCAGGAGAAACTCCCAAATACCATTAACAAACAGTAACCATGATTCGGTCCGTAAGATGTCCATCAAGGCATCTAACCAAGGAAACAATGGAATTGAGTCTTCTCATAACCAGGAAAGAAATGGATCAAGAAGGATGGTTGAGACAAAGAGACCAGCTGAGAAGAAAGTTAGTTTGAGTGTTCTTCAGCAACACTTCTCCGGTACTCTGAAGGATGCTGCTAGGAGCATTGGTGTTTGCCCGACAACTCTGAAAAGGATATGCAGGAAACAAGGGATTTCGAGATGGCCATCCCGCAAGATCAAGAAAGTGAACCGATCGTTAAAGAAAATACAGACCGTGCTCGACACTGTCGAAGGACTGGAAGGAGGGTTGAAGTTTGATCCCTGTCTAGGGGCACTTGTATCAAGAGAAGGAGAATCAATCATCCAAGAAATTGATGCACACGATACTCTTTTGCACCCTGAGAATGTTACTGCAAAAGAAAAATGGGTTCTGAACAAGGGTGGTTCAAGAGAAGACAAATCGAAACATTCAAGTATCTTGGTTAATAGGGATGATGATGGAGCTGTTGAACATAACCACCCTTCTTCTTCAGGCTTTACAAACTCATCTAATGATTCTGGTTCAAACCAGAGGCAGAACTTGAAAGGCAAATCAACCTTTGCCGATAAAACTGGGTTGAAACTTCAAGCCAAAGCTACCTATGGCGAAGACACTGTTCGTTTCAAGTTTGATCCATCCTGGGGTTGTTTGAAGCTATATGAAGAAGTTGCAACAAGGTTCAAATTACAAAATGGGTCGTTTCAACTCAAATATCTAGATAATGAACAAGAGTTGGTGAGGTTGTTAGATGACTCAGATTTGCAGGAGTGTATGGAAATATTGGATGAAGTTGGGAAAAGTTGTGTCAGGTTTGTTGTTCGCGACATACCATGCAATTTAAGCAGCCCCAGCTGCAGTAGTTGCTACCTAGGATGTGACTCATAG 2613 0.4122 MEPYPYSPKRSGASYWGSCRVQLEGSTSLDGDMSNSISDDMACSFSGLMNFDPYAGLYNSPSITDQVFNNGLPSSYPSTPGFNLEENNSSQFFRTEMNGYFNTKQGSPGYGEKIAFQQMDTLLGFFDGTDDTHSLSSMQKINGSSQHLDAIGSYIMSKPASLSLDERMLKALSVFKESAGGGILAQVWVPIKDGDQFFLTTSEQPYLLDQILAGYREVSRTYTFSTEGKPGSLPGLPGRVFMSKTPEWTSNIGYYNKNEYLRMDDAINHEVRGSIGLPISDLHSELPCCAVLELVTTNEKPDFEKEMDIVCHALQNVDLTANMPPRLLPQCLSNSKRAALTAIVDVLRSVCHAHRLPIALTWIPCCVAEDAEGKDTKIHIKEGHSSPREKNILCVEESACYVTDKAMEGFVHACIEHHLQEGKGIAGRAHQSNHPFFCPDVKAYNISEYPLVHHARKYNLNAAVAIRLRSTYTNDDDYILEFFLPVNMKGSSEQQLLLDNLSGTMQKVCRNLRTVSDEELSRMKGSHVGFKNKNVPRIFPMSRRNSQIPLTNSNHDSVRKMSIKASNQGNNGIESSHNQERNGSRRMVETKRPAEKKVSLSVLQQHFSGTLKDAARSIGVCPTTLKRICRKQGISRWPSRKIKKVNRSLKKIQTVLDTVEGLEGGLKFDPCLGALVSREGESIIQEIDAHDTLLHPENVTAKEKWVLNKGGSREDKSKHSSILVNRDDDGAVEHNHPSSSGFTNSSNDSGSNQRQNLKGKSTFADKTGLKLQAKATYGEDTVRFKFDPSWGCLKLYEEVATRFKLQNGSFQLKYLDNEQELVRLLDDSDLQECMEILDEVGKSCVRFVVRDIPCNLSSPSCSSCYLGCDS 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01498 870 MobiDBLite consensus disorder prediction 727 759 - -
Arst8g01498 870 ProSiteProfiles PB1 domain profile. 770 852 IPR000270 GO:0005515
Arst8g01498 870 MobiDBLite consensus disorder prediction 736 759 - -
Arst8g01498 870 Pfam RWP-RK domain 598 645 IPR003035 -
Arst8g01498 870 PANTHER PROTEIN NLP8 96 863 IPR045012 GO:0003700
Arst8g01498 870 SMART PB1_new 770 852 IPR000270 GO:0005515
Arst8g01498 870 ProSiteProfiles RWP-RK domain profile. 580 665 IPR003035 -
Arst8g01498 870 MobiDBLite consensus disorder prediction 565 595 - -
Arst8g01498 870 MobiDBLite consensus disorder prediction 579 595 - -
Arst8g01498 870 Pfam PB1 domain 773 851 IPR000270 GO:0005515
Arst8g01498 870 SUPERFAMILY CAD & PB1 domains 771 854 - -
Arst8g01498 870 Gene3D - 769 853 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01498 Arst-Chr8 24080648 24085944 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01498 771 867 NLP Transcription Factor Family AT2G43500 62.887 4.90e-30 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Arst8g01498 PB1 3.2e-17 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01498 - - aip:107613413 1721.06