Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01485 ATGTCTAGCACTACAGCTGGTCAAGTCATCAAGTGCAGAGCTGCGGTTGCATGGGAAGAAGGGAAGCCACTGGCCGTAGAAGAAGTAGAGGTAGCACCACCAGAGGCTGGTGAAGTTCGCTTGAAGATCCTCTACACTAGTCTTTGTCATTCTGATCTCTACTTCTGGAAGAGCAAGGGGGGTAGGAATTTGTTGTTTCCTCGCATACTCGGTCATGAAGCTGCAGGGATTGTGGAGAGCATAGGGGAGGGTGTGACAAATCTGAAGCCAGGAGATCATGTGCTACCTGTGTTCACCGGAGAGTGTGGCGAATGCCGAAGCTGCAAGTCTGAAGAGAGCAACCTCTGTGAAGTCCTCAGGCTCAACACTGATACTGGTGTCATGCTAAGTGATGGAAAATCAAGATTCTCCAAAGATGGAAAACCCATTTACCACTTCCTTGGAACTTCCACATTCAGTGAATACACTGTCTCACATGCTAAGTGTGTTATAAAGATCAACCCTGCTGCCCCACTTGACAAAGTTTGTGTTCTCAGTTGTGGAATCTGCACAGGACTTGGTGCAACCTTAAATGTGGCAAAACCAAAGCCCGGTTCTACTGTTGCTGTCTTTGGATTGGGAGCAGTTGGTCTTGCTGCTGCTGAAGGGGCAAGGCTTGCTAGTGCATCAAGAATCATTGGAGTTGATATACTTTCCAGCAGACAGGAACAGGCCAAAAGTTTTGGAATCACTGACTTTGTGAACCCAAAAGATCATGACAAACCTGTGCAACAGGTAATTGTTGAAATGACCGATGGAGGAGTTGATCGCGCTCTAGAATGCACTGGACACGTAGAAGCCGCGATTGCAGCATTTGAATCTGTTCATGATGGTTGGGGTGTTGCTGTGCTTGTTGGGCTGCCAAGCAGTGAAGATGAATTCAAAACAAAATCCATCAACTTATTGTATGAGAGGACTGTTAAGGGTACCTTCTATGGAAACTACAAACCACTCTCTGATATTCCCTCTGTTGTGGAGAAGTACATGAACAAAGAGCTAGAATTGGAGAAATTCATCACTCACTCAATCCCATTCTCTGAGATCAATAAATCATTTGATTTAATGCTGAAAGGAGAGTCAATTAGGTGCCTCATCTGCATGGAAGGCTGA 1149 0.4578 MSSTTAGQVIKCRAAVAWEEGKPLAVEEVEVAPPEAGEVRLKILYTSLCHSDLYFWKSKGGRNLLFPRILGHEAAGIVESIGEGVTNLKPGDHVLPVFTGECGECRSCKSEESNLCEVLRLNTDTGVMLSDGKSRFSKDGKPIYHFLGTSTFSEYTVSHAKCVIKINPAAPLDKVCVLSCGICTGLGATLNVAKPKPGSTVAVFGLGAVGLAAAEGARLASASRIIGVDILSSRQEQAKSFGITDFVNPKDHDKPVQQVIVEMTDGGVDRALECTGHVEAAIAAFESVHDGWGVAVLVGLPSSEDEFKTKSINLLYERTVKGTFYGNYKPLSDIPSVVEKYMNKELELEKFITHSIPFSEINKSFDLMLKGESIRCLICMEG 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01485 382 SUPERFAMILY GroES-like 331 378 IPR011032 -
Arst8g01485 382 FunFam Alcohol dehydrogenase class-P 185 323 - -
Arst8g01485 382 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 171 344 IPR036291 -
Arst8g01485 382 FunFam alcohol dehydrogenase 1-like isoform X1 20 184 - -
Arst8g01485 382 Pfam Alcohol dehydrogenase GroES-like domain 37 166 IPR013154 -
Arst8g01485 382 Gene3D - 185 323 - -
Arst8g01485 382 CDD alcohol_DH_plants 10 378 - -
Arst8g01485 382 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Arst8g01485 382 Gene3D - 21 372 - -
Arst8g01485 382 Pfam Zinc-binding dehydrogenase 208 328 IPR013149 -
Arst8g01485 382 PANTHER ALCOHOL DEHYDROGENASE 7 378 - -
Arst8g01485 382 SUPERFAMILY GroES-like 5 188 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01485 Arst-Chr8 24030163 24032599 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01485 38 372 Monolignol Biosynthesis Gene Families AT1G72680 26.471 1.27e-15 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01485 K18857 - ming:122088951 592.038