LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst8g01477	ATGTTCATTGATGAAGCAGATACTTGTGTGATCTTCGATAATTTTTGCAAGGAAGAGGATGTGGCTGCGCATGCTTCTTCTGAGATTATTAAGTATGATGTCTTCCTCAGCTTCAGAGGCACAGACACTCGCTGTGGTTTTCTCAGCCATCTGCGCAAGGAATTAGAGGACAAACACATCAAGACATACGTGGATAATATGCTCAGAGAAGGAACTGAAATATCACACTCACTCCTTGCAGCCATTGAACAATCAGAAATTGCTTTGATCATATTCTCCCAGGATTATGCTTCTTCCAAATGGTGTTTGGAAGAACTAGCCAAAATAATGGAATGCAGGAAACAAAATGGTCAAATTGTAATACCTATTTTCCATAATGTAGACCCATTATGGGTGCGCCACCAAAAGGAAAGTTATCACCACGCCCTTGCTAATCATGAGGTGAGGTTTGCAGACAGGGTGCAAATCTGGAGAGATGCTCTCAAGGAAGCTGCCAATTTGTCTGGATTCCATTCACCGTCATCAAGCTTCAGGGATGATGCTGACCTTGTTGGTGAAATTGTCAAACGTGTCTTACAAAGGTTAAACCAATCACCCCAAGGTGATTTGCAGGGTCTTGTTGGAATTCATGGACCAATTGAAAAGCTAGTATCTTTGTGCACGGAATCTGAAGCTGTTATTGTTGGACTTTGGGGCATGGGCGGTGTTGGTAAGACAACTCTTGCGACTGCAGTTTTCAATAGATTGTGTGATGGATTTGAAGGATTTTGCTTTTTGAACAATGTAAGAGAAAGAGCTGAGAAATATGGTATAGATCATTTGAAGAAAGAACTTCTTTCCAAGCTGCTAAAGGAAGAAGATGCAAGTCCCTTTGTCACGCCCGGTGGGATAACTAATTTTGCCAAGAAAAGACTTAGTCGAACAAAGGTTCTTGTTGTTCTTGATGATGTCAATGATTCAGACCAAATGGAAGATTTATGTGGAGGACACACATGGTTTGGGGCAAGTAGCAGAATCATAGTGACAACAAGAGACAAGCATGTGCTTGTTAAGGCGGATGCTGATCATATACATGAAGTTGAGACATTGAATTCTGATGATTCTCTTCGGCTTTTCAGCCTGAATGCCTTCAAGCAAAACTGCACTATAGAAGCAGAACAAGTTGAGTTGTCCAAAAGAGTGCTTAACTATTGCAAAGGCCTCCCTTTAGCATTGAAAATCTTGGGTTCCTTTCTTAAAGGAAAAACTCAACGAGAGTGGGAAAGTGAACTGCTCAAACTTGAAAAGATGCCTGATGAAAAAATCCAAAGTATATTGCGATTGAGTTATAATGAACTGGATCGTAATGATCGGAACATCTTTTTGCATCTTGCATGTTTCTTTTATACAAATACAGAAGAAGAGCTGATACAATCTGTTCTTGATTCCTGCGGATACGCAACAACTATCGGGTTGACAAATCTTCATAATAAAGCTCTTATTTCCGTTTCAAATGGTTATGTGTCCATGCATGACTTAATTCGAGAAATGGGCCGTGAAATTGTTTGCGAAGAATCTCTAAATGATCCAGGAAAACGCAGTAGACTGTGGGATCCTCAGGATATCTGTAAAGTATTGAAAGACAATAAGGGAACGGATGCTATTGAAAGTATCGAATTAAACATGTCGGAAATTGACCGGATGAGCTTGCACCCTGAGACATTTGAAAGAATGGCTGGACTGAAGCTTGTTAGATTTCATGCAGCCGATTCCAAAAACAAGTTGTATGCTCCAGAGGGTATTAGATCTATGTCGAACGAGTTAAGGTATTTTCATTGGGATGAGTTTCCTTTGAAATCTTTGCCGCCTTCTTTAAGTGTTGAGAGAATTGTTGAAATCATAATGCCCAACAGTGGATTGCAAAAGCTTTGGGAAGGTGAACAGAATCTTGTAAATCTAAGGAAAGTGGATCTAGATGGTTCGTCAAGCCTAATGGAGCTCCCAGATTTATCAAAAGCTTCAAATCTTAGAGAAGTGAGTATCTCTGGTTGCAAGAGTCTGTGTCAAGTTCCTCCATCTGCTGTATGTTCCCAGAAGCTGAAATACCTGAACGTGAGCAACTGTGAGAGTCTTGAGTCCATAGCAGAGCTTCCAGCATCGGTTGTGTGCGTAATTGCTCGCGACTGCCGCTCCTTACACACTGTATCTGTATCTGCTTTGGATTCTGTGGCTGAAGAGGCAATCCAGCAGCAGCAATTTGAGGATATAACCTTCAATTTCAGCAATTGCTACAAATTGGAAGAGAATGCAAAAAACAGCATTATGGAACATGCCTATGGAAGACTAAAGCGACCACTAGCAGCAGCACCGACATGTGCTACAACAGCATGGCTGGATAAGGAGGATAAGCACCCGTATCGTTATCTGTCAGGCAAGCAGCACAATCATCCCAAGTTAAATGTGTTGTCAGGTGCAGACCCGGGATGGTTCAGATATATAAACCCACAGAACGGGGCAGTCACTCTTGATGTTGCCCCAGGTGATAGCTTGTTGGGTTTCATCTTTTGGGTCGTTTTTCCTGCATACTCTGGGAGTTACCAAGTGAGCGCCACTTCAGTGTCATATACGTATTGCGTTGAAGTGAGGAATGGCCCAAGTTTCAGTTATGATGGGCATTGGATGCCAGATGAGGATATATGGCTTAACGATTACTATTTTTGGTACGACGGGCAATGCTGCATTGACATGATCAAGGTAATGGAAGAAAACACCAACACTAATAATAATAATATTCAACTCAAGGTTTCATTCAAGTTCTTCTACAATCGTCTTATTTTGAGTCAGCCTATTGAGGAAGATGATGACAAAGAAGTAGAATATTGGGGTGTGCACCCAATATATGCCTCAGATGTTCGTGGTGGCATGAGCATGGAGTCGGTAAATGATGTAAATCTTAATATGAATGTACCGTCTATTGAGGAAGGTAATGGTGGTTCCATAGATGACTCAGATGAAAGAGGTGGTGTTTCGGAGTCGGTTGCACTCATGCATGGTGGCAGGACGGATCTATAG	3051	0.4166	MFIDEADTCVIFDNFCKEEDVAAHASSEIIKYDVFLSFRGTDTRCGFLSHLRKELEDKHIKTYVDNMLREGTEISHSLLAAIEQSEIALIIFSQDYASSKWCLEELAKIMECRKQNGQIVIPIFHNVDPLWVRHQKESYHHALANHEVRFADRVQIWRDALKEAANLSGFHSPSSSFRDDADLVGEIVKRVLQRLNQSPQGDLQGLVGIHGPIEKLVSLCTESEAVIVGLWGMGGVGKTTLATAVFNRLCDGFEGFCFLNNVRERAEKYGIDHLKKELLSKLLKEEDASPFVTPGGITNFAKKRLSRTKVLVVLDDVNDSDQMEDLCGGHTWFGASSRIIVTTRDKHVLVKADADHIHEVETLNSDDSLRLFSLNAFKQNCTIEAEQVELSKRVLNYCKGLPLALKILGSFLKGKTQREWESELLKLEKMPDEKIQSILRLSYNELDRNDRNIFLHLACFFYTNTEEELIQSVLDSCGYATTIGLTNLHNKALISVSNGYVSMHDLIREMGREIVCEESLNDPGKRSRLWDPQDICKVLKDNKGTDAIESIELNMSEIDRMSLHPETFERMAGLKLVRFHAADSKNKLYAPEGIRSMSNELRYFHWDEFPLKSLPPSLSVERIVEIIMPNSGLQKLWEGEQNLVNLRKVDLDGSSSLMELPDLSKASNLREVSISGCKSLCQVPPSAVCSQKLKYLNVSNCESLESIAELPASVVCVIARDCRSLHTVSVSALDSVAEEAIQQQQFEDITFNFSNCYKLEENAKNSIMEHAYGRLKRPLAAAPTCATTAWLDKEDKHPYRYLSGKQHNHPKLNVLSGADPGWFRYINPQNGAVTLDVAPGDSLLGFIFWVVFPAYSGSYQVSATSVSYTYCVEVRNGPSFSYDGHWMPDEDIWLNDYYFWYDGQCCIDMIKVMEENTNTNNNNIQLKVSFKFFYNRLILSQPIEEDDDKEVEYWGVHPIYASDVRGGMSMESVNDVNLNMNVPSIEEGNGGSIDDSDERGGVSESVALMHGGRTDL	1016

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst8g01477	1016	Pfam	NB-ARC domain	214	447	IPR002182	GO:0043531
	Arst8g01477	1016	MobiDBLite	consensus disorder prediction	984	1016	-	-
	Arst8g01477	1016	SMART	till_3	31	167	IPR000157	GO:0007165
	Arst8g01477	1016	Pfam	Leucine Rich Repeat	624	641	IPR011713	-
	Arst8g01477	1016	Gene3D	-	29	191	IPR035897	-
	Arst8g01477	1016	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	32	765	IPR044974	GO:0006952
	Arst8g01477	1016	Gene3D	-	362	447	IPR042197	-
	Arst8g01477	1016	FunFam	Disease resistance protein (TIR-NBS-LRR class)	28	197	-	-
	Arst8g01477	1016	Pfam	TIR domain	31	208	IPR000157	GO:0007165
	Arst8g01477	1016	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	195	457	IPR027417	-
	Arst8g01477	1016	SUPERFAMILY	L domain-like	503	712	-	-
	Arst8g01477	1016	ProSiteProfiles	TIR domain profile.	30	195	IPR000157	GO:0007165
	Arst8g01477	1016	Gene3D	Ribonuclease Inhibitor	539	761	IPR032675	-
	Arst8g01477	1016	SUPERFAMILY	Toll/Interleukin receptor TIR domain	30	170	IPR035897	-
	Arst8g01477	1016	PRINTS	Disease resistance protein signature	227	242	-	-
	Arst8g01477	1016	PRINTS	Disease resistance protein signature	304	318	-	-
	Arst8g01477	1016	PRINTS	Disease resistance protein signature	641	657	-	-
	Arst8g01477	1016	PRINTS	Disease resistance protein signature	398	412	-	-
	Arst8g01477	1016	Gene3D	-	192	358	IPR027417	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst8g01477	Arst-Chr8	23918403	23994530	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst8g01477	623	721	WRKY Transcription Factor Family	AT4G12020	33.000	9.25e-06	48.1

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst8g01477	-		-	adu:107461399	2023.44