LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst8g01476	ATGGCTGCGCATGCTTCTTCTGAGATTATTAAGTATGATGTCTTCCTCAGCTTCAGAGGCAGAGACACTCGCCGTGGTTTTCTCAGCCATCTGCACAAGGCTTTAGAGGACAAGCACATCAAGACATACGTGGATTACATGCTCAGAGAAGGAACTGAAATATCACACTCACTACTTGCAGCCATTGAACAATCAGAAATTGCTTTGATCATATTCTCCCAGGATTATGCTTCTTCCAAATGGTGTTTGGAAGAACTAGCCAAAATAATGGAATGCAGGGAAAAAAATGGTCAAATTGTAATACCTATTTTCCATAATGTAGACCCATCATGGGTGCGCCACCAAAAGGAAATTTATCACCACGCCCTTGCTAATCATGAGGTGAGGTTTGCAGACAGGGTGCAAATCTGGAGAGATGCTCTCAAGGAAGCTGCCAATTTGTCTGGATTCCATTCACCGTCATCAAGCTTCAGGGATGATGCTGACCTTGTTGGTGAAATTGTCAAACGTGTCTTACAAAGGTTAAACCAATCACCCCAAGGTGATTTGCAGGGTCTTGTTGGAATTCATGGACCAATTGAAAAGCTAGTATCTTTGTGCACGGAATCTGAAGCTGTTATTGTTGGACTTTGGGGCATGGGCGGTGTTGGTAAGACAACTCTTGCGACTGCAGTTTTCAATAGATTGTGTGATGGATTTGAAGGATTTTGCTTTTTGAACAATGTAAGAGAAAGAGCTGAGAAATATGGTATAGATCATTTGAAGAAAGAACTTCTTTCCAAGCTGCTAAAGGAAGAAGATGCAAGTCCCTTTGTCACGCCCGGTGGGATAACTAATTTTGCCAAGAAAAGACTTAGTCGAACAAAGGTTCTTGTTGTTCTTGATGATGTCAATGATTCAGACCAAATGGAAGATTTATGTGGAGGACACACATGGTTTGGGGCAAGTAGCAGAATCATAGTGACAACAAGAGACAAGCATGTGCTTGTTAAGGCGGATGCTGATCATATACATGAAGTTGAGACATTGAATTCTGATGATTCTCTTCGGCTTTTCAGCCTGAATGCCTTCAAGCAAAACTGCACTATAGAAGCAGAACAAGTTGAGTTGTCCAAAAGAGTGCTTAACTATTGCAAAGGCCTCCCTTTAGCATTGAAAATCTTGGGTTCCTTTCTTAAAGGAAAAACTCAACGAGAGTGGGAAAGTGAACTGCTCAAACTTGAAAAGATGCCTGATGAAAAAATCCAAAGTATATTGCGATTGAGTTATAATGAACTGGATCGTAATGATCGGAACATCTTTTTGCATCTTGCATGTTTCTTTTATACAAATACAGAAGAAGAGCTGATACAATCTGTTCTTGATTCCTGCGGATACGCAACAACTATCGGGTTGACAAATCTTCATAATAAAGCTCTTATTTCCGTTTCAAATGGTTATGTGTCCATGCATGACTTAATTCGAGAAATGGGCCGTGAAATTGTTTGCGAAGAATCTCTAAATGATCCAGGAAAACGCAGTAGACTGTGGGATCCTCAGGATATCTGTAAAGTATTGAAAGACAATAAGGGAACGGATGCTATTGAAAGTATCGAATTAAACATGTCGGAAATTGACCGGATGAGCTTGCACCCTGAGACATTTGAAAGAATGGCTGGACTGAAGCTTGTTAGATTTCATGCAGCCGATTCCAAAAACAAGTTGTATGCTCCAGAGGGTATTAGATCTATGTCGAACGAGTTAAGGTATTTTCATTGGGATGAGTTTCCTTTGAAATCTTTGCCGCCTTCTTTAAGTGTTGAGAGAATTGTTGAAATCATAATGCCCAACAGTGGATTGCAAAAGCTTTGGGAAGGTGAACAGAATCTTGTAAATCTAAGGAAAGTGGATCTAGATGGTTCGTCAAGCCTAATGGAGCTCCCAGATTTATCAAAAGCTTCAAATCTTAGAGAAGTGAGTATCTCTGGTTGCAAGAGTCTGTGTCAAGTTCCTCCATCTGCTGTATGTTCCCAGAAGCTGAAATACCTGAACGTGAGCAACTGTGAGAGTCTTGAGTCCATAGCAGAGCTTCCAGCATCGGTTGTGTGCGTAATTGCTCGCGACTGCCGCTCCTTACACACTGTATCTGTATCTGCTTTGGATTCTGTGGCTGAAGAGGCAATCCAGCAGCAGCAATTTGAGGATATAACCTTCAATTTCAGCAATTGCTACAAATTGGAAGAGAATGCAAAAAACAGCATTATGGAACATGCCTATGGAAGACTAAAGCGACCACTAGCAGCAGCACCGACATGTGCTACAACAGCATGGCTGGATAAGGAGGATAAGCACCCGTATCGTTATCTGTCAGGCAAGCAGCACAATCATCCCAAGTTAAATGTGTTGTCAGGTGCAGACCCGGGATGGTTCAGATATATAAACCCACAGAACGGGGCAGTCACTCTTGATGTTGCCCCAGGTGATAGCTTGTTGGGTTTCATCTTTTGGGTCGTTTTTCCTGCATACTCTGGGAGTTACCAAGTGAGCGCCACTTCAGTGTCATATACGTATTGCGTTGAAGTGAGGAATGGCCCAAGTTTCAGTTATGATGGGCATTGGATGCCAGATGAGGATATATGGCTTAACGATTACTATTTTTGGTACGACGGGCAATGCTGCATTGACATGATCAAGGTAATGGAAGAAAACACCAACACTAATAATAATAATATTCAACTCAAGGTTTCATTCAAGTTCTTCTACAATCGTCTTATTTTGAGTCAGCCTATTGAGGAAGATGATGACAAAGAAGTAGAATATTGGGGTGTGCACCCAATATATGCCTCAGATGTTCGTGGTGGCATGAGCATGGAGTCGGTAAATGATGTAAATCTTAATATGAATGTACCGTCTATTGAGGAAGGTAATGGTGGTTCCATAGATGACTCAGATGAAAGAGGTGGTGTTTCGGAGTCGGTTGCACTCATGCATGGTGGCAGGACGGATCTATAG	2991	0.4183	MAAHASSEIIKYDVFLSFRGRDTRRGFLSHLHKALEDKHIKTYVDYMLREGTEISHSLLAAIEQSEIALIIFSQDYASSKWCLEELAKIMECREKNGQIVIPIFHNVDPSWVRHQKEIYHHALANHEVRFADRVQIWRDALKEAANLSGFHSPSSSFRDDADLVGEIVKRVLQRLNQSPQGDLQGLVGIHGPIEKLVSLCTESEAVIVGLWGMGGVGKTTLATAVFNRLCDGFEGFCFLNNVRERAEKYGIDHLKKELLSKLLKEEDASPFVTPGGITNFAKKRLSRTKVLVVLDDVNDSDQMEDLCGGHTWFGASSRIIVTTRDKHVLVKADADHIHEVETLNSDDSLRLFSLNAFKQNCTIEAEQVELSKRVLNYCKGLPLALKILGSFLKGKTQREWESELLKLEKMPDEKIQSILRLSYNELDRNDRNIFLHLACFFYTNTEEELIQSVLDSCGYATTIGLTNLHNKALISVSNGYVSMHDLIREMGREIVCEESLNDPGKRSRLWDPQDICKVLKDNKGTDAIESIELNMSEIDRMSLHPETFERMAGLKLVRFHAADSKNKLYAPEGIRSMSNELRYFHWDEFPLKSLPPSLSVERIVEIIMPNSGLQKLWEGEQNLVNLRKVDLDGSSSLMELPDLSKASNLREVSISGCKSLCQVPPSAVCSQKLKYLNVSNCESLESIAELPASVVCVIARDCRSLHTVSVSALDSVAEEAIQQQQFEDITFNFSNCYKLEENAKNSIMEHAYGRLKRPLAAAPTCATTAWLDKEDKHPYRYLSGKQHNHPKLNVLSGADPGWFRYINPQNGAVTLDVAPGDSLLGFIFWVVFPAYSGSYQVSATSVSYTYCVEVRNGPSFSYDGHWMPDEDIWLNDYYFWYDGQCCIDMIKVMEENTNTNNNNIQLKVSFKFFYNRLILSQPIEEDDDKEVEYWGVHPIYASDVRGGMSMESVNDVNLNMNVPSIEEGNGGSIDDSDERGGVSESVALMHGGRTDL	996

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst8g01476	996	SUPERFAMILY	L domain-like	483	692	-	-
	Arst8g01476	996	MobiDBLite	consensus disorder prediction	964	996	-	-
	Arst8g01476	996	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	175	437	IPR027417	-
	Arst8g01476	996	ProSiteProfiles	TIR domain profile.	10	175	IPR000157	GO:0007165
	Arst8g01476	996	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	12	745	IPR044974	GO:0006952
	Arst8g01476	996	Pfam	NB-ARC domain	194	427	IPR002182	GO:0043531
	Arst8g01476	996	Pfam	Leucine Rich Repeat	604	621	IPR011713	-
	Arst8g01476	996	Gene3D	-	9	172	IPR035897	-
	Arst8g01476	996	Pfam	TIR domain	11	188	IPR000157	GO:0007165
	Arst8g01476	996	PRINTS	Disease resistance protein signature	207	222	-	-
	Arst8g01476	996	PRINTS	Disease resistance protein signature	621	637	-	-
	Arst8g01476	996	PRINTS	Disease resistance protein signature	378	392	-	-
	Arst8g01476	996	PRINTS	Disease resistance protein signature	284	298	-	-
	Arst8g01476	996	Gene3D	-	342	427	IPR042197	-
	Arst8g01476	996	SMART	till_3	11	147	IPR000157	GO:0007165
	Arst8g01476	996	Gene3D	Ribonuclease Inhibitor	519	741	IPR032675	-
	Arst8g01476	996	Gene3D	-	173	339	IPR027417	-
	Arst8g01476	996	FunFam	Disease resistance protein (TIR-NBS-LRR class)	8	177	-	-
	Arst8g01476	996	SUPERFAMILY	Toll/Interleukin receptor TIR domain	10	150	IPR035897	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst8g01476	Arst-Chr8	23918403	23994530	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst8g01476	12	690	WRKY Transcription Factor Family	AT4G12020	31.178	3.12e-89	312

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst8g01476	-		-	adu:107461399	1957.18