Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01470 ATGTTTGTTGATGAAGCAGATACTTGTGTGATCTTCGATAATTTTTGCAAGGAAGAGGATATGGCTGCGCATACTTCTTCTGAGATTATTAAGTATGATGTCTTCCTCAGCTTCAGAGGCACAGACACTCGCCGTGGTTTTCTCAGCCATCTGCGCAAGGCTTTAGAGGACAAGCACATCAAGACATACGTGGATTACATGCTCAGAGAAGGAACTGAAATATTGCACTCACTCCTTGCAGCCATTGAACAATCAGAAATTGCTTTGATCATATTCTGCCAGGATTATGCATCTTCCCAATGGTGTTTGGAAGAACTAGCCAAAATATTGGAATGCAGGAAACAAAATGGTCAAATTATAATACCTATTTTCCATAATGTAGACCCATCATGGGTGCGCCGCCAAAAGGAAAGTTATCACCATGCGCTTGCTAATCATGAGGTGAGGTTTGCAGATAGGGTGCAAATCTGGAGAGATGCTCTCAAGGAAGCTGCCAACTTGTCTGGATTCCATTCACCGTCATCAAGCTTCAGGAACGATGCTGACCTTGTTGATGAAATTGTCAAACGTGTCTTACAAAGGTTAAACCAATCACCCCAAGGTGATTTGCAGGGTCTTGTTGGAATTCATGGACCAATTGAAAAGCTAGTATCGTTGTGCATGGAATCTGAAGCTGTTATTGTTGGCCTTTGGGGCATGGGCGGCATTGGTAAGACAACTCTTGCGACTGCAGTTTTCAATAGATTGTGTGATGGATTTGAAGGATTTTGCTTTTTGAACAATGTAAGAGAAAGAGCTGAGAAATATGGTATAGATCATTTGAAGACAGAACTTCTTTCCAAACTGCTAAAGGAAGAAGATGCAAGTCCCTTTGTCATGCCTGGTGGGATAACTAATTTTGCCAAGAAAGGACTTAGTCGAACAAAGGTTCTTGTTGTTCTTGATGATGTCAATGATTCAGATCAAATGGAAGATTTATGTGGAGGACATACATGGTTTGAGGCAAGTAGCAGAATCATAGTGACAACAAGAGATAAGTATGTTCTTGCTACAGCTGATGCATATCATATACATGAAGTTAAGACATTGAATCCTGATGAATCTCTTCGGCTTTTCAACTTGAATGCCTTTAAGCAAAACTGCGAAACTCAAGCTATTCAAAGTATCACTTTAAACATGTATGAAATTGATACGATAAAGTTGCACCCTGAGACATTTGAAAGAATGCCAGAACTGAAGCTTGTTAGATTTCATGCACCCGATTTCAGAAGAAAGTTGTGTGCTCCAGAAGATATTACATCCCTGCCAAAGAAGTTGAGCTACTTTCATTGGGATGAGTTTCCTTTGAAATCTTTGCCGTCTTCTTTTGGTGTTGAGAGAATTGTTGAAATCATAATGCCCGATAGTGGATTCAAACGCTTTGGGAAGAATCTTGTAAGTCTAAGGAAAGTGGATCTAGATGGTTCGTCAAGCCTAATGGAGCTCCCAGATTTATCAAAAGCTTCAAATCTTAGAGAAGTGAGTATCTCTGGTTGCAAGAGTCTACGTCAAGTTCCTCCATCTGCTGTGTGTTCCCAGAAGCTGAAATACCTGAAAGTGAGCAACTGTGAGAGCCTTGAAAGGAAGAATTTTCTTTCTGCCCCCACTCCCCACAACACCCACTTCTCCGTTTTTGTGCAGACGAGGGATTAG 1692 0.4102 MFVDEADTCVIFDNFCKEEDMAAHTSSEIIKYDVFLSFRGTDTRRGFLSHLRKALEDKHIKTYVDYMLREGTEILHSLLAAIEQSEIALIIFCQDYASSQWCLEELAKILECRKQNGQIIIPIFHNVDPSWVRRQKESYHHALANHEVRFADRVQIWRDALKEAANLSGFHSPSSSFRNDADLVDEIVKRVLQRLNQSPQGDLQGLVGIHGPIEKLVSLCMESEAVIVGLWGMGGIGKTTLATAVFNRLCDGFEGFCFLNNVRERAEKYGIDHLKTELLSKLLKEEDASPFVMPGGITNFAKKGLSRTKVLVVLDDVNDSDQMEDLCGGHTWFEASSRIIVTTRDKYVLATADAYHIHEVKTLNPDESLRLFNLNAFKQNCETQAIQSITLNMYEIDTIKLHPETFERMPELKLVRFHAPDFRRKLCAPEDITSLPKKLSYFHWDEFPLKSLPSSFGVERIVEIIMPDSGFKRFGKNLVSLRKVDLDGSSSLMELPDLSKASNLREVSISGCKSLRQVPPSAVCSQKLKYLKVSNCESLERKNFLSAPTPHNTHFSVFVQTRD 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01470 563 Gene3D Ribonuclease Inhibitor 365 550 IPR032675 -
Arst8g01470 563 SUPERFAMILY Toll/Interleukin receptor TIR domain 28 170 IPR035897 -
Arst8g01470 563 PRINTS Disease resistance protein signature 227 242 - -
Arst8g01470 563 PRINTS Disease resistance protein signature 476 492 - -
Arst8g01470 563 PRINTS Disease resistance protein signature 304 318 - -
Arst8g01470 563 SUPERFAMILY L domain-like 391 540 - -
Arst8g01470 563 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 397 540 IPR044974 GO:0006952
Arst8g01470 563 Pfam NB-ARC domain 215 387 IPR002182 GO:0043531
Arst8g01470 563 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 195 390 IPR027417 -
Arst8g01470 563 Gene3D - 209 357 IPR027417 -
Arst8g01470 563 FunFam Disease resistance protein (TIR-NBS-LRR class) 28 197 - -
Arst8g01470 563 ProSiteProfiles TIR domain profile. 30 195 IPR000157 GO:0007165
Arst8g01470 563 Pfam TIR domain 31 208 IPR000157 GO:0007165
Arst8g01470 563 SMART till_3 31 167 IPR000157 GO:0007165
Arst8g01470 563 Gene3D - 26 200 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01470 Arst-Chr8 23851081 23853577 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01470 365 540 WRKY Transcription Factor Family AT4G12020 32.124 1.30e-19 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01470 - - adu:127739648 1115.91