Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01464 ATGGGATTACAAGAAAATCTTCTGAGAGGCATATATGCTTATGGTTTTGAGAGGCCTTCTGCAATACAGCAAAGGGGAATTGTTCCTTTCTGCAAAGGTTTAGATGTGATTCAGCAGGCTCAATCTGGAACTGGCAAGACAGCAACATTCTGTTCTGGAATTTTGCAGCAGCTTGATTATGGAGTGGTTCAGTGTCAGGCTTTGGTTTTGGCACCAACAAGGGAGCTGGCACAGCAAATTGAGAAGGTTATGCGAGCACTTGGTGATTACCTTGGTGTCAAGGTTCATGCTTGTGTTGGTGGGACAAGTGTTCGCGAGGATCAGCGCATTCTCCAGGCTGGTGTCCACACTGTTGTTGGCACTCCCGGCCGTGTTTTTGACATGCTGCGGAGACAGTCTCTTCGCCCAGATTACATAAAGATGTTTGTTTTGGATGAGGCAGATGAAATGCTTTCTCGTGGTTTCAAAGACCAGATCTATGACATCTTCCAGCTTCTACCATCTAAAATTCAGGTTGGAGTGTTTTCTGCTACCATGCCACCAGAAGCCCTTGAGATTACAAGGAAGTTCATGAATAAGCCAGTGAGAATCTTGGTTAAGCGAGATGAATTGACCCTTGAAGGTATCAAGCAGTTTTATGTGAATGTTGAGAAGGAAGACTGGAAGCTAGAGACGCTCTGCGACCTTTATGAGACTCTGGCCATCACACAGAGTGTCATCTTTGTGAACACAAGGCGCAAGGTGGATTGGCTCACTGATAAGATGAGAAGCAACGATCACACCGTTTCGGCCACACACGGCGACATGGATCAAAACACTCGTGACATCATTATGCGCGAATTCCGGTCAGGCTCATCGCGAGTTCTCATCACCACTGATTTATTGGCTAGAGGCATAGATGTGCAGCAAGTGTCTCTGGTTATAAACTATGATCTGCCAACTCAACCAGAGAACTATCTTCACCGCATAGGAAGGAGTGGAAGGTTTGGAAGGAAAGGTGTTGCTATAAACTTTGTGACTTTGGATGATGCAAGGATGCTTTCTGATATTCAGAAGTTCTACAATGTCAGTGTAGAAGAGTTGCCATCAAATGTTGCTGATCTCCTCTGA 1110 0.4541 MGLQENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGVVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHTVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEDWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSNDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTLDDARMLSDIQKFYNVSVEELPSNVADLL 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01464 369 Pfam Helicase conserved C-terminal domain 222 330 IPR001650 -
Arst8g01464 369 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 208 369 IPR001650 -
Arst8g01464 369 FunFam Eukaryotic initiation factor 4A-III 204 369 - -
Arst8g01464 369 CDD DEADc_EIF4A 1 198 - -
Arst8g01464 369 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 6 353 - -
Arst8g01464 369 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 27 197 IPR014001 -
Arst8g01464 369 Pfam DEAD/DEAH box helicase 21 182 IPR011545 GO:0003676|GO:0005524
Arst8g01464 369 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 143 151 IPR000629 -
Arst8g01464 369 FunFam Eukaryotic initiation factor 4A-II 1 203 - -
Arst8g01464 369 Gene3D - 1 204 IPR027417 -
Arst8g01464 369 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 1 24 IPR014014 GO:0003724
Arst8g01464 369 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 65 350 IPR027417 -
Arst8g01464 369 SMART ultradead3 15 212 IPR014001 -
Arst8g01464 369 SMART helicmild6 249 330 IPR001650 -
Arst8g01464 369 CDD SF2_C_DEAD 209 339 - -
Arst8g01464 369 Gene3D - 205 369 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01464 Arst-Chr8 23806701 23808812 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01464 1 369 Eukaryotic Initiation Factors Gene Family AT1G72730 91.870 0.0 707
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01464 K03257 - gmx:100777628 721.079