Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01446 ATGGCTGCACTTGTTCGAGCTCCACCCAAAGATTTCAAGCTCATCAAGCATGAATGGGCTGCCATACGCATTCAGGCAGTCTTTCGAGCTTTTTTGGCTAGGAGAGCTTTGAGAGCCTTGAGGGCAGTGGTAAGGTTGCAAGCTATATTTCGAGGCCGGTTAGTTCGAAAGCAAGCGGTTGTTACTCTAAGGTGCATGCAGGCTCTTGTTAGAGTTCAGGCACGCGTAAGGGCAAGGAAAGTGAGGAACTCTCCAGAAGGGAAGGCAGTGCAGAAATTGTTGGATGAACATCGCAGCCTTGCTGATCCAGTTAAGCAGGCTGAGCAAGGATGGTGTGACATTCCTGGGACTGCAGATGAAGTTAAAGCAAAGCTGAGAATGAGGCAGGAAGGAGCCATCAAAAGGGATAGAGCAATGGCATACTCTCTCTCCACACAGCATTCAAGAGGGTGTGCTAGTCCAAACTCAAGAGCCTCTAAGGCAGAGGCAATGACTCATTTCAAGCATCAGAACCTAGACAATAAGAGCTTAGGAAGCAGCTTGTTAGAACACTGGATGGCATCAAAGCCATGGGAGAGTCCAATGTCCAAGAAAAGTGATGATCACATTGTTCAATCAAGAAGGAATGGTGTGACAACCAGGATCTCAGTGAAATCTCTTCCAACAAGTCATTCGACTCCATCGTCTTCGGCGATAAGCTCTGATTGCATGTATGATGATAGCCCTGCATCAACATGCACATCAGAGGAAAGAGATGTTGTTCATAAGCCTAGCTACATGAATTTGACAAAATCAACCAAGGCAAAATTGAAGGCTTGCAGGAGTTCTTCACAGAATTCAAAGGATTCTTGTGTGTCTCATAGCACAACACTTGTGAATGGAGATGCTAGTAACAGTGCTGTTTCTGATCCATCAGTTAACTTGTGGAATGGTCTTTGTTCAACACCTCTAAGGGCAAGTTATCAAAGAAGATATGGTAGGAGCCTAGGAGGTAGATAA 999 0.4555 MAALVRAPPKDFKLIKHEWAAIRIQAVFRAFLARRALRALRAVVRLQAIFRGRLVRKQAVVTLRCMQALVRVQARVRARKVRNSPEGKAVQKLLDEHRSLADPVKQAEQGWCDIPGTADEVKAKLRMRQEGAIKRDRAMAYSLSTQHSRGCASPNSRASKAEAMTHFKHQNLDNKSLGSSLLEHWMASKPWESPMSKKSDDHIVQSRRNGVTTRISVKSLPTSHSTPSSSAISSDCMYDDSPASTCTSEERDVVHKPSYMNLTKSTKAKLKACRSSSQNSKDSCVSHSTTLVNGDASNSAVSDPSVNLWNGLCSTPLRASYQRRYGRSLGGR 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01446 332 Gene3D - 18 60 - -
Arst8g01446 332 ProSiteProfiles IQ motif profile. 17 45 IPR000048 GO:0005515
Arst8g01446 332 PANTHER IQ-DOMAIN 5-RELATED 14 287 - -
Arst8g01446 332 SMART iq_5 16 38 IPR000048 GO:0005515
Arst8g01446 332 SMART iq_5 39 60 IPR000048 GO:0005515
Arst8g01446 332 Pfam IQ calmodulin-binding motif 41 58 IPR000048 GO:0005515
Arst8g01446 332 Pfam IQ calmodulin-binding motif 19 38 IPR000048 GO:0005515
Arst8g01446 332 ProSiteProfiles IQ motif profile. 41 68 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01446 Arst-Chr8 23576030 23577967 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01446 1 308 IQD Protein Family AT2G26180 46.608 9.06e-84 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01446 - - gmx:100816492 399.823