Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01424 ATGAGCAAAAAGATCAGCACAACCTCACAGGCTTGCGCTGCTTGTAAGCACCAACGTAGGAAGTGTGGTCCTAACTGCATTCTCGCACCATATTTTCCTCACGATCGCCAAAAACAATTCCTTAACGCTCATAAATTGTTTGGAGTTGGAAGAATGACTGATCTCATCAAACCACTGGGTCCTACCGAGAGAAACATTGCCATGGAAACCATCATCTACGAATCTGAGATGCGAGCCTATGATCCTGTTAACGGTTGTTGTACAATGATTCAACAGCTTCAATCTGAGATTGAGTACCGTCAAGCTGAGCTTCAACTTGTTCTTCATCGTCTCGCCCTCTTCAAAGCTCAAGCGCAGCAGCAATCTTCGAGTTGCAACCAAGTTAATAATGTTGAAGGGATTCCATTTCAACCGGATCAATATTATGAAGCTACTAACATGGATAGCAATAGCTCCATTACGCATGAAGTGGATCTTAATGCATGGATGATGCAAAACTTGCAATCACCTGCGTTGTTATCACCTTTGACATTAACCAATGAGAATGAAAATGGCAATGTTGGAGTTGATGATAATAATGGCTATATTTATGATCAGAAGCCTATGCTTGACCTTGGTTTTAAAGAAACCAAATCAAATCATCAAACACCAGTGGAGGGCATGCATTATTCAGGGATGAAGCAAATTTACAATTTTCAAGATCAGGAACAGAAAGATTAA 720 0.4069 MSKKISTTSQACAACKHQRRKCGPNCILAPYFPHDRQKQFLNAHKLFGVGRMTDLIKPLGPTERNIAMETIIYESEMRAYDPVNGCCTMIQQLQSEIEYRQAELQLVLHRLALFKAQAQQQSSSCNQVNNVEGIPFQPDQYYEATNMDSNSSITHEVDLNAWMMQNLQSPALLSPLTLTNENENGNVGVDDNNGYIYDQKPMLDLGFKETKSNHQTPVEGMHYSGMKQIYNFQDQEQKD 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01424 239 ProSiteProfiles LOB domain profile. 10 111 IPR004883 -
Arst8g01424 239 Pfam Lateral organ boundaries (LOB) domain 11 106 IPR004883 -
Arst8g01424 239 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 8 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01424 Arst-Chr8 23400047 23401418 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01424 10 136 AS2 family AT3G13850 51.724 2.16e-47 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Arst8g01424 LOB 3.6e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01424 - - adu:107461308 462.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g01424 8 23400047 23401418 Arst9g00687 9 6247243 6249561 PCT