Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01420 ATGGGGTTACAGCTGATACTATTCCTGTTAATCAAGCTACATTTAGTTCTCTGTATTCCACAGCTTCATCAATATGCAGCAACAAATCTGCACCATTCAAGGGTCAGAAGCCATTCAAGTATTGCATTGCCACCATCTAAGTCATCATATTCTAGAGTTCCTGCATCTATAGCACTTCCTCCTTCCAAGGCATCTTATGGAGTTCATGGAACTACTGCAGTTTCACCATCCAAGTCATTCTCCAAAGCTCCTACAAAGATGTGGATTCATGGTTATGTGGATTCTCCAATATCATCACATCATAAGCACCACAATTACAAAAGAAAATTTAGAAACCAAACTCCTGAGCCAACCTACCCAAACAATCCTCATACTCATCAAGGTACTTCAGTCTTCAAATCACAACCTCATTTATTTTCACCAAAAAGCTGGAATTCTGCTGCACCTGCACCATCACCATCACCATCAGTTTTATCAGAACACTTGAATGTGCCCTCTCCCTCCCCAAGAATTTCACCTCTAGGTTCATCATTGAATAAGATAAAGACTCCACCACCAGCATATGCTTTGGTTCTTCCACCTCCACCACCTAATAAGGATTGCATGATGGTGACTTGCTCAGAGCCATTGACAAACACACCTCCTGGATCTCCTTGTGGTTGTGTGTGGCCACTTCAAGTTAAACTCCACATCAGCATTGCAATATACAAGTTCTTCCCTTTGGTTTTCAAGCTAGCTGAGGAAATTGCAGCCAGTCTTTTGTTGAGTCGCAACCAGGTTCGCATTGTTGGAGCTAATGCAGCAAATCATCAACTAGAGAAAACCACTGTTCTCTTAAATTTGGTACCTCAAGGAGTTAAGTTTGATGATACAACAGCATTCTTGATATACAAGAAATTCTGGCACAAAGAAATTCTCACTGATGCTTCCCTTTTTGGTGCCTATGAAGTACTCTATGTTCATTATCCAGGTCTTCCACCTTCTCCACCTTCAAGTCCTTTTGATGTTTCTGGTATAGTTGACCCAGATGCTGTTGGTAATGATGGGAATTTAATAAAGCCTTTAGGAGTTGATGTCTCTAATAAGAAGAAAAAAGAAGGGAATGGCGAAAGAACGGTTGGTATGCTCGTGTTGTCGTGTTTTGCAGCTTCTGTTCTGTTCCTTGGAGTTACTTGGCTTTGTCTATTGAAATGCCACTGTCCAGCCCTTGAAACTGAACAAGCTACAGATGTTATAATTGCACCCTCTTTCAAAAATTCAGGCATTGCCAGGTCATTGCCTTATGAGAACATGGTGAATTCTAGATCAACCTCAACCAATTCTGGAACAATAGCATATGCAGGATCAGCTAAGATATTCACTTTGAATGAAATAGAGAAAGCAACAAATAGCTTCAGTTCTTCAAGAATATTAGGAGAAGGTGGCTTTGGCCTTGTTTACAAAGGAGGCCTACAAGATGGGAGGGATGTTGCAGTGAAGATTCTCAAAAGGGATGATCATCATGGCGGCCGCGAATTTTTGGCCGAAGTTGAGATGCTTAGCCGTCTGCACCATAGAAATTTAGTTAAATTGATAGGTATATGCATTGAGAAACAGAGTCGTTGCCTTGTCTATGAGCTTGTTCCTAATGGAAGTGTAGAATCCCACTTACATGGTTCAGACAAGGAAACAGGTCCACTTGATTGGGATGCACGGATGAAGATTGCGCTTGGCGCTGCTCGAGGATTGGCTTATCTGCATGAAGATTCAAATCCATGTGTCATACATAGAGACTTCAAGTCCAGCAACATCTTGTTGGAACATGACTTCACACCCAAGGTATCAGATTTTGGATTGGCTAGAACAGCACTTGATGAGAGAAACAAGCACATTTCCACACATGTTATGGGCACATTTGGGTATCTAGCTCCTGAATATGCAATGACAGGACATCTTCTTGTGAAAAGTGATGTTTACAGTTATGGAGTAGTCCTCCTAGAGCTCCTAACCGGGAGAAAGCCTGTGGACTGGTCGCGATCGCCTGGTCAAGAATACCTTGTTGCTTGGGTTCGTCCGCTTCTCACAAGTAAAGAAGGTTTGGAGATGATTATAGACCCGGATATAAAGCACAGCATTTCTCTTGACAGCATACTAAAAGTCGCAGCCATTGCATCCATGTGTGTGCAAGAAGAAGTCACTCAACGCCCTTTCATGGGTGAAGTTGTGCAGGCCTTGAAGTTGGTATGCAGTGAGTTTGAGGAGACAGACTATGCAGGACAGGCAAGTTTTCAAGATGATGTACAAGGGAAATTTTCCAAAAGTTCAGATGAGAGAGTGGATTTTTCGTGTAAGAACTCCCTGAATGACTATGAAGCTAGTGAAGAGTCAGATAGATGCATCAACATAGAAGATGTTTAG 2397 0.4205 MGLQLILFLLIKLHLVLCIPQLHQYAATNLHHSRVRSHSSIALPPSKSSYSRVPASIALPPSKASYGVHGTTAVSPSKSFSKAPTKMWIHGYVDSPISSHHKHHNYKRKFRNQTPEPTYPNNPHTHQGTSVFKSQPHLFSPKSWNSAAPAPSPSPSVLSEHLNVPSPSPRISPLGSSLNKIKTPPPAYALVLPPPPPNKDCMMVTCSEPLTNTPPGSPCGCVWPLQVKLHISIAIYKFFPLVFKLAEEIAASLLLSRNQVRIVGANAANHQLEKTTVLLNLVPQGVKFDDTTAFLIYKKFWHKEILTDASLFGAYEVLYVHYPGLPPSPPSSPFDVSGIVDPDAVGNDGNLIKPLGVDVSNKKKKEGNGERTVGMLVLSCFAASVLFLGVTWLCLLKCHCPALETEQATDVIIAPSFKNSGIARSLPYENMVNSRSTSTNSGTIAYAGSAKIFTLNEIEKATNSFSSSRILGEGGFGLVYKGGLQDGRDVAVKILKRDDHHGGREFLAEVEMLSRLHHRNLVKLIGICIEKQSRCLVYELVPNGSVESHLHGSDKETGPLDWDARMKIALGAARGLAYLHEDSNPCVIHRDFKSSNILLEHDFTPKVSDFGLARTALDERNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDWSRSPGQEYLVAWVRPLLTSKEGLEMIIDPDIKHSISLDSILKVAAIASMCVQEEVTQRPFMGEVVQALKLVCSEFEETDYAGQASFQDDVQGKFSKSSDERVDFSXCKNSLNDYEASEESDRCINIEDV 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01420 799 Gene3D Phosphorylase Kinase; domain 1 436 540 - -
Arst8g01420 799 FunFam receptor-like serine/threonine-protein kinase ALE2 438 540 - -
Arst8g01420 799 FunFam Receptor-like serine/threonine-protein kinase ALE2 541 756 - -
Arst8g01420 799 PANTHER OS01G0750732 PROTEIN 193 764 - -
Arst8g01420 799 MobiDBLite consensus disorder prediction 112 178 - -
Arst8g01420 799 MobiDBLite consensus disorder prediction 100 178 - -
Arst8g01420 799 Gene3D Transferase(Phosphotransferase) domain 1 541 786 - -
Arst8g01420 799 Pfam Protein tyrosine and serine/threonine kinase 468 738 IPR001245 GO:0004672|GO:0006468
Arst8g01420 799 SUPERFAMILY Protein kinase-like (PK-like) 440 738 IPR011009 -
Arst8g01420 799 ProSitePatterns Protein kinases ATP-binding region signature. 471 493 IPR017441 GO:0005524
Arst8g01420 799 ProSitePatterns Serine/Threonine protein kinases active-site signature. 587 599 IPR008271 GO:0004672|GO:0006468
Arst8g01420 799 ProSiteProfiles Protein kinase domain profile. 465 741 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g01420 799 CDD STKc_IRAK 471 739 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01420 Arst-Chr8 23354892 23358759 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01420 198 799 Receptor kinase-like Gene Family AT5G56890 58.576 0.0 688
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Arst8g01420 PK_Tyr_Ser-Thr 2.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01420 - - gmx:100814040 1082.78