Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01407 ATGGCAGTAATGGAAGAAAAGCATTCTCTTCTCCATGGAACAATTGAAGCTACTATCTTTGATGCCACACCTTATTCGCCTTCATTTCCCTTTAATTGTCTATGGCCAAATGGAAAGCCAGCTTTTGTGACCATCAAAATAGGCAACAAGGTGATGGCAAAAACTACACAAGAAAGAGGGCGTGTGTGGAACCAAACCTTTCAGATTCAATGTGCTCATCCAAGTGATTCAACCATCACCATCACTCTGAAAACACCATGTTCCATATTGGGAAAATTCCAAATTAAGGCTCAACAATTGAAAGAAGGAAGCTTCATGAATGGTTTCCTCCCCCTCCTAATGGAAAATGGAAAACCAAGCACACAACTCAAGTTGAGGTTCATATTATGGTTTAAGCCAGCAGATTTGGAGACAAGTTGGGCAAAGATAATTAGCAATGGGGATTATAAAGGGATTAATGATGCTACATTCCCTCTGAGGTCTAATTGTCAAGTTAAGCTCTATCATGATGCTCATCATTCACATGATTTTCAACCTCCTTTTGATCTATGTGGAGCACCAAGAAATCTATGGGAGGATGTCTACAAAGCAATTGAGGGTGCAAAGTATTTAATTTACATTGCAGGGTGGTCCTTCAATCCCAACATGATTCTGGTTAGAGATCCTCAAACAGAAATCCCACATGCCAGAGAAGTAAAGTTGGGTGAACTATTGAAGAGGAAAGCAGATGAAGGAGTGGCTGTGAGGATTATGATTTGGGATGATGAGACATCTTTGCCTTTAATTAAGATCAAAGGTGTTATGAACACCCATGATGAAGAATCTTTTGCTTACTTCAAACACACAAAAGTAATATGCAGAAAATGTCCAAGATTACACCATAAGTTCCCCACAGTCTTTGCTCACCACCAGAAAACTATAACTCTGGACACCAGAGCACCCAACAACTCTGCTAATGAAAGAGAGATTCTGAGCTTCTTGGGTGGTGTTGATCTCTGTGATGGCCGGTACGACACAGAGACACACTCATTGTTCCGAACACTTGACAAGGAATCTCATTACCATGACTTCTACCAGACAAACATTGCAGGAGCTAGCCTCAACAAAGGAGGGCCAAGAGAGCCATGGCATGATGCTCATGCTTGTGTAACTGGTGAGGCTGCATGGGATGTTTTAACAAATTTTGAGCAAAGATGGACAAAACAATGTGATCCTTCTCTTCTAGTCCCTGCCAACACCTTAGTAAAGCTCTATCCTTCTTTTGCAAGTAATCCCTCTGAGAGGGATTGGAAAGTTCAGGTATATCGATCAATTGATCATGTATCTGCTAGTCAAATGTTTAGAAAGCTTACTGTTGAGAGAAGCATACATGAGGCTTATGTGGAAGCGATTAGGCGCGCCGATAAGTTCATATATATTGAGAACCAATATTTCATTGGAGGGTGCCATTTGTGGGAGAAAGATAGTTATAGTGGCTGTGGAAATCTGATTCCAGTTGAGATTGCACTCAAGGTTGTTAGTAAGATCAAAGCAAAAGAGAGGTTTGCAGTGTACATAGTAATACCAATGTGGCCAGAAGGTGTTCCTGAAAGTGAACCAGTTCAAGATATACTGCATTGGACCAGAGAAACAATGGCAATGATGTATGGATTAATTGGAGAAGCAATACAAGAAAGTGGTGAGCCTGGGCACCCAAGAGACTACTTGAATTTCTTCTGCCTTGCGAATAGGGAACAGAAGGGAATAGATGAGTTTCTTCCACCACATTCTCCACATCCTGAAACACAATACTGGAATGCACAGAAAAACAGAAGGTTCATGGTTTATGTCCATTCCAAGATCATGATTGTGGACGACCTATACATATTAATAGGATCAGCCAATGTGAACCAAAGATCCATGGATGGACAAAGGGACACAGAGATTGCTATAGGATGCTACCAGTCTCAAGATGGAGCTGAGTCTGACAAACTCATGAATCATGGTGATATTCATGCATACAGAATGTCACTGTGGTATGAACACACCCAGAGCACTGATGAACTGTTCTTGGAGCCGGAAAGGTTGGATTGTGTGCATAGAATGCGGTTGATAGGAGATAAAATGTGGCAAGTGTACAGGAATGAAGAGATTGTGGACATGGAGGGGGTGCACCTTGTAACATACCCCATTATGGTAACACAAGAAGGGTGTGTAGAGGACATGCCTAATGGTGAGGATTATTTTCCTGATACAAAATGTTTAGTGAAAGGAAAGAGGTCTAAGTTACTACCCCCTCTATTTACCACTTAG 2292 0.414 MAVMEEKHSLLHGTIEATIFDATPYSPSFPFNCLWPNGKPAFVTIKIGNKVMAKTTQERGRVWNQTFQIQCAHPSDSTITITLKTPCSILGKFQIKAQQLKEGSFMNGFLPLLMENGKPSTQLKLRFILWFKPADLETSWAKIISNGDYKGINDATFPLRSNCQVKLYHDAHHSHDFQPPFDLCGAPRNLWEDVYKAIEGAKYLIYIAGWSFNPNMILVRDPQTEIPHAREVKLGELLKRKADEGVAVRIMIWDDETSLPLIKIKGVMNTHDEESFAYFKHTKVICRKCPRLHHKFPTVFAHHQKTITLDTRAPNNSANEREILSFLGGVDLCDGRYDTETHSLFRTLDKESHYHDFYQTNIAGASLNKGGPREPWHDAHACVTGEAAWDVLTNFEQRWTKQCDPSLLVPANTLVKLYPSFASNPSERDWKVQVYRSIDHVSASQMFRKLTVERSIHEAYVEAIRRADKFIYIENQYFIGGCHLWEKDSYSGCGNLIPVEIALKVVSKIKAKERFAVYIVIPMWPEGVPESEPVQDILHWTRETMAMMYGLIGEAIQESGEPGHPRDYLNFFCLANREQKGIDEFLPPHSPHPETQYWNAQKNRRFMVYVHSKIMIVDDLYILIGSANVNQRSMDGQRDTEIAIGCYQSQDGAESDKLMNHGDIHAYRMSLWYEHTQSTDELFLEPERLDCVHRMRLIGDKMWQVYRNEEIVDMEGVHLVTYPIMVTQEGCVEDMPNGEDYFPDTKCLVKGKRSKLLPPLFTT 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01407 763 Gene3D Endonuclease Chain A 178 417 - -
Arst8g01407 763 SUPERFAMILY Phospholipase D/nuclease 151 436 - -
Arst8g01407 763 Gene3D Endonuclease Chain A 418 668 - -
Arst8g01407 763 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 606 633 IPR001736 GO:0003824
Arst8g01407 763 PIRSF PLD_plant 2 763 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Arst8g01407 763 Pfam PLD-like domain 462 644 IPR025202 -
Arst8g01407 763 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 41 129 IPR035892 -
Arst8g01407 763 PANTHER PHOSPHOLIPASE D 7 745 IPR015679 -
Arst8g01407 763 SMART pld_4 298 336 IPR001736 GO:0003824
Arst8g01407 763 SMART pld_4 606 633 IPR001736 GO:0003824
Arst8g01407 763 Pfam C2 domain 41 112 IPR000008 -
Arst8g01407 763 Pfam Phospholipase D C terminal 680 752 IPR024632 -
Arst8g01407 763 SUPERFAMILY Phospholipase D/nuclease 425 706 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01407 Arst-Chr8 23234380 23237263 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01407 33 763 Phospholipase D Gene Family (Wang group) AT1G55180 62.013 0.0 957
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01407 K01115 - gmx:100807431 1313.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g01407 8 23234380 23237263 Arst8g01407 8 23234380 23237263 ECH
Arst8g01407 8 23234380 23237263 Arst9g00619 9 5411691 5417026 PCT