Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01400 ATGAGTCGAGAACAGCATAAGCGAGGGAAGGAAGAAAAAGGTTCAGATGGTGCTGAGAAGGTTATTGTTGCTGTTAAGGCATCAAAGGAAATTCCAAAGACAGCACTTGTTTGGTCTCTGACTCATGTTGTTCAACCTGGGGATTGCATTACACTAATAGTGGTTGTGCCTTCTTCACAAAGTTTTGGAAGAAGATTATGGGGTTTTCCAAGGTTTGCTGGTGACTGTGCCAACACCCAGAAGAAATCTCATTCACCAACTAGTTCAGAGCAGAAGAGTGAGATTACTGATTCTTTCTCTCAGATGATTCTTCAGCTCCATGACATCTATGATCCAAATAAGATAAATGTCAAGATTAAAATTGTTTCTGGATCACCTTGTGGAGCAGTGGCTGCAGAAGCTAGAAAGGCCCAAGCCAATTGGGTTGTATTAGACAAGCAGCTAAAACAAGAAGAAAAGCAGTGTATGGAAGAGCTGCATTGCAACATTGTTGTTATGAAACAATCCCAAGCGAAAGTGCTCCGGTTGAATTTGATTGGATCACAAAAGAAGGATCTTGAAGAAGCAGCTCCATTACATTCCAAGCAAGATGGGAAGCTTGGAAGACAAGCCAAGAATAAGAATGATTCTTTGAGTTCCATAAAAGGAGCAGTTGTCACCCCAACTAGTAGTCCAGATGTAGGGACGCCTTCTACCGCGACTGAAGCCGGTACTTCATCTGTTTCAAGCTCTGATCCTGGAACTTCACCATTCTTTGTTTCTGAGATGAATAATGGTGAGTCAAAGAAAGAGGAAACTATTAAACAAAATGAAGAAGTTGATGCTAGTTCAGACTCAGATAGCGAAAAGTTGTCCCTATCCTCAGCAACCTTGAGATTCCAACCATGGATCAAAGATTTACTTTTATGCAAACAATCATCTCAATGCAGAGAAGAAGGATGCCATAGCAAGAATCAAACATCCACAGCTAGAGCTTTGATGGAAAAGTTCTCAAGGCTAGAAAGAGAAGCTGAAATGGAGATCTCAAGCCATATGAGTGAGTTGGATTTGAGTGGAAATGTAAGAGAAGCAATAACATTATCAAGAAATGCTCCACCTGGTCCACCTCCATTGTGTTCAATATGTCAACACAAGGCTCCTGTTTTTGGGAAACCTCCAAGGTGGTTCAGCTATGCCGAGTTGGAACTCGCTACGAGTGGATTCTCTCAAGCTAATTTCTTGGCAGAAGGGGGATTTGGCTCTGTTCACAGAGGGGCCTTACCTGATGGACAAGTCATTGCTGTGAAGCAGCATAAACTGGCTAGTTCTCAGGGTGATGTTGAATTTTGCTCAGAGGTTGAAGTCCTCAGCTGTGCTCAGCATCGAAACGTTGTAATGCTCATTGGATTCTGTATTGAGAATAAGAGAAGGTTGCTGGTTTATGAGTACATATGTAATGGATCTCTGGACACTCACTTATATGGGAAAAAACAGGAACCATTAGAATGGTCAGCACGTCAAAGAATTGCCGTGGGAGCTGCTAGAGGCTTGAGATATCTTCATGAGGAGTGCAGAGTAGGCTGCATTATCCACCGTGACATGCGGCCGAATAACATTCTTATCACCCATGATTTTGAGCCACTGGTTGGTGATTTTGGGCTAGCAAGGTGGCAGCAACATAGAGACACTGGTGTTGAAACTAGAGTGATTGGAACATTTGGGTATTTGGCTCCTGAATATGCTCAAAGCGGCCAAATAACAGAAAAGGCTGATGTTTACTCCTTTGGGGTGGTATTGGTGGAGCTTGTTACCGGACGAAAAGCTGTCGATCTTAGCAGGCCGAAGGGGCAGCAATGTCTTACTGAATGGGCACGGCCATTGCTAGCAGAATATGCAATTGAGGAACTAATTGATCCAAGGTTGGGAAATAACTATGCAGAAAATGAGGTCAATTGCATGCTTCATGCAGCTTCATTATGCATGAGGAGAGATCCTTATTCCAGACCACGCATGTCACAGGTGCTCAGAATACTGGAGGGTGACATGATCATGGACACAAATTACATTACAGCTACCAATCCCACCACCACATAA 2073 0.4317 MSREQHKRGKEEKGSDGAEKVIVAVKASKEIPKTALVWSLTHVVQPGDCITLIVVVPSSQSFGRRLWGFPRFAGDCANTQKKSHSPTSSEQKSEITDSFSQMILQLHDIYDPNKINVKIKIVSGSPCGAVAAEARKAQANWVVLDKQLKQEEKQCMEELHCNIVVMKQSQAKVLRLNLIGSQKKDLEEAAPLHSKQDGKLGRQAKNKNDSLSSIKGAVVTPTSSPDVGTPSTATEAGTSSVSSSDPGTSPFFVSEMNNGESKKEETIKQNEEVDASSDSDSEKLSLSSATLRFQPWIKDLLLCKQSSQCREEGCHSKNQTSTARALMEKFSRLEREAEMEISSHMSELDLSGNVREAITLSRNAPPGPPPLCSICQHKAPVFGKPPRWFSYAELELATSGFSQANFLAEGGFGSVHRGALPDGQVIAVKQHKLASSQGDVEFCSEVEVLSCAQHRNVVMLIGFCIENKRRLLVYEYICNGSLDTHLYGKKQEPLEWSARQRIAVGAARGLRYLHEECRVGCIIHRDMRPNNILITHDFEPLVGDFGLARWQQHRDTGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLSRPKGQQCLTEWARPLLAEYAIEELIDPRLGNNYAENEVNCMLHAASLCMRRDPYSRPRMSQVLRILEGDMIMDTNYITATNPTTT 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01400 690 MobiDBLite consensus disorder prediction 258 279 - -
Arst8g01400 690 ProSitePatterns Tyrosine protein kinases specific active-site signature. 522 534 IPR008266 GO:0004672|GO:0006468
Arst8g01400 690 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 477 680 - -
Arst8g01400 690 PANTHER OS01G0750732 PROTEIN 156 677 - -
Arst8g01400 690 MobiDBLite consensus disorder prediction 187 204 - -
Arst8g01400 690 ProSiteProfiles Protein kinase domain profile. 401 677 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g01400 690 Gene3D Transferase(Phosphotransferase) domain 1 477 684 - -
Arst8g01400 690 Pfam Protein tyrosine and serine/threonine kinase 405 670 IPR001245 GO:0004672|GO:0006468
Arst8g01400 690 Gene3D Phosphorylase Kinase; domain 1 373 476 - -
Arst8g01400 690 MobiDBLite consensus disorder prediction 187 282 - -
Arst8g01400 690 CDD STKc_IRAK 407 673 - -
Arst8g01400 690 MobiDBLite consensus disorder prediction 205 256 - -
Arst8g01400 690 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 373 476 - -
Arst8g01400 690 SUPERFAMILY Protein kinase-like (PK-like) 385 676 IPR011009 -
Arst8g01400 690 FunFam Dual-specific kinase DSK1-like 12 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01400 Arst-Chr8 23209830 23214827 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01400 388 672 Trihelix Transcription Factor Family AT5G38560 54.110 5.69e-103 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Arst8g01400 PK_Tyr_Ser-Thr 8.5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01400 - - gmx:100789216 1129.78