Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01386 ATGTCAAAGTCTCCCTCTCTTGAGAAGCACCAGTCCGTTTATTCTTCTTCTGAGCCTAGGGAGTTTATTATGGCTACAGAAATAGAGGATCCCGAGTCTACTATGTCAACAGTTGCTAAGCTTGTGGAGCAACTGCATGCCAAGTTGTCATCAGCACAAGAGAAGGAACTTATCACAACACGATTGCTAGGTATTGCCAGGAGAAGAAAGGATGGCAGGGCACTTATTGGCACTCATTCTCAAGCGATGCCATTGTTCATAAACATTCTTAGAAATGGAACCTCTCTTGCGAAAGTTAATGTTGCTACTATTCTCAGTGTACTGTGCAAAGATGAAGACTTGAGGTTAAAAGTTCTTCTTGGTGGTTGTGTCCCACCATTGCTGTCAATTTTAAAATATGAATCAACTGATGCAAGAAAGGCGGCAGCTGAAGCAATATATCAAGTTTCCATCGGAGGTCTGTCAGAAGATCATGTTGGTATGAAAATTTTTGTTACAGAAGATGTAGTTCCAACGTTGTGGAATCTACTAAGTCCTAAGAACAAGCAAGACAAAATTGTTGAGGGTTTTATTACTGGAGCATTAAGAAATTTGTGTGGTGACAAAGATGGCTACTGGAATGCAACATTAGAAGCTGGAGGTATTGAAATCATTGTGGATCTCTTGTCTTCAGACAATGCTGTTTCTCAGTCAAATGCAGCTTCTCTGTTGGCACGTCTAATGTCGGCTTTCAGTGGTAGCATCCCAAAAGTAATAGACTCTGGAGCAGTTAAAGCTTTAGTTCGACTTGTAGGGGAGGAAAACAATATTTCTGTTCGAGCTGGTGCTGCTGATGCTCTAGAGGCCCTTTCTTCAAAGTCAACCAATGCGAAGAAAGGTATTGTTGATTCTGATGGTGTTCAAATCCTTATTGGAGCCATAGTTGCTCCTTCAAAAGAATGTATGCAATCTGATGGCGGCCAGGCTCTTCAAGGGCATGCAACACGAGCTCTAGCCAATTTATGTGGTGGCATGCCTGCATTAATAATATATCTTGCAGAACTTTCCTGTTCTCCTCGTTTGACAGCTCCAGTTGGTGATATAATAGGCGCTCTTGCTTACACCCTTATGGTCTTTGAGGAAAAAGTTGATGATGATCAGGATCATTTTGATGCAACTAAGATAGAGGATATTTTAGTAACTCTTTTAAAGCCTCGAGATAACAAGCTTATTCAAGAGCGTGTCCTTGAGGCCATGGCTAGCCTATATGGTAATGTCTATCTCTCGAAGTTTCTCTATCAAGCAGACTCAAAGAAGGTTCTCATTGGGCTTATAACTATGGCTGCCATTGATGTGCAAGGGTATTTGATACGTTCACTGACAAGCTTGTGCTGTGACAGGGTAGGAATATGGGAGGCGATAAAAAAAAGAGAAGGTATTCAGTTACTTATATCTATGCTGGGATTATCTAGTGAGCAGCATCAAGAGTACTCGGTTGAACTGCTAGCAATCTTAACTGACCAAGTTGAGGACAGCAAGTGGGCAATCACTGCTGCTGGAGGGATTCCACCATTGGTGCAGTTGCTGGAGACAGGATCGCAAAAAGCAAGAGAGGAAGCAGCTCATGTTCTTTGGAGTTTGTGTTGTCACAGTGAAGACATCCGTGCTTGCGTTGAAATTGCTGGGGCCATTCCAGCATTTCTGTGGCTTCTTAAGAGTGGTGGACCAAAAGGACAAGAAGCTTCTGCTTTGGCACTGATGAAGCTTGTCAGAGTTGCTGATTCTGCAACGATAAATCAGCTATTAGCAATGCTCCTAGGAGATTCTCCAACCTCAAAGGGACATATAATCCGAGTTTTAGGTCATGTACTTACTGTGGTTTCACAGAAAGATCTTGTGGAAAAGGGATGTGCAGCAAATAAAGGCCTAAGATGTCTTGTTCAGGTTATCAATGCATCAAATGAGGAAACCCAAGAATTTGCAACTTCAGCGATAGCTAATTTATTTACCACAAGACAAGACATTTGTGATGGTCTAGTAAATGAAGACCTTGTGCTTCCTTTAATGAAGCTTCTGACTAACAAAAATCAAGGTGTGGCCATTCAGTCAGCTCGAGCATTAAGTTCTCTATCACGTCCAACCAATAGCAAAGCTGCAAATAAGTTGTCTTATATAGTACTTGAAGGAGATGTTCAACCACTAATTAAGTTGGCTAAAACATGCTGTGTGGATGATGCAGAAACTTCTGTTGCTGCTTCTGAATCTGCTGTTGCTGCTTCTGAATCTGCTGTTGCTGCATTGGCCAACCTTCTTTTTGATCCTTATATTGCTGCCGAGGCCCTGGCTGAAGATGTTGTTCCAGCTTTAACAAGAATTCTGGAGAAAGGAACCTTGGAAGGTAAACAAAATGCATCACGAGCTCTTCATGAATTATTGAAGCATTTTTCAGTAGGAGATCTTCTTAAGGGAGACGAACAGTGCCGTTTAACTTTGCTAGCCCTTGTTGATTCGTTAAGATCTATGCATATAGATGAGACTGAAGCTGCAGATGCTTTAGATGTGATTGCATTGCTAGCTAGGACAAAACATGATGTCAGCCTCACTTATCCTCCATTGTTGGTTCTGGCTGATAAATCTTGCTTAGAACCCCTTGTCTGCTGCCTTGCTGATGGTCCACCTATTGTGCAAGACAAGGCAATTGAAATTTTGTCCAGACTTTGTGGAGATCAGCCAGTTGTTCTTGGTGACTTGTTGTCTTCTAGTTCCAGATGCACTGGATCATTAGCTCATAGAATAATTAACTCTGCTAGTTTAGAAGTAAAAGTTGGAGCAGCTGCCTTACTAATTTGCACTGTAAAGGATAAGAAAGAGCTCTCAATGGATTTGCTTGACACTTCTGGATATCAAAAACCATTGATTTACTCCTTAGTTGACATGATGAAGCAAAGTTCTAATTGTTCATTGTTAGAAATCGAAGTTTGCACCCCTAGAGGTTTTATGGAGAAGAATGCATTTCCAGAAGTTGATGAGTCAGAAATTCCTGATGCAGCCACAGTCTTGGGTGGTACTGTTGCCTTGTGGTTACTCTCAATTATTGCTTCTGTCCAGGTAACAAACAAATTAATAATTTTGGAAGCTGGTGGACTGGAAATTCTCTCTGAGAAACTTGCAAGACATGTCTCAAATCCACAGGCACAATATGAGGATACTGAAGAAATATGGATCAGCGCATTACTCTTGGCCATTTTATTTCAAGATACAAAGGTCATTCAATCTCCTGCAACAATGTGCACTGTACCTTCTCTGAATCTACTTCTAACATCTGAGGAAGTAATTGACAAATATTTTGCTGCCCAGGCTATGGCTAGTCTTGTTCAAAATGGTGATAAGGGAATAGGTCTTGCCATTGCAAATTCTGGTGCTGTCCCAGGATTGATAACTATGATTGGGCATATAGAAACAGATATGCCAAATCTCATGGCTTTATCAGATGAGTTTTCCTTGGTGCGAACTCCTGATCAAGTTGTTTTGGATCATCTATTTGAAATTGAGGATGTAAGACTGGGATCTGTTGCACGGAAATCTATACCTCTTTTAGTAGATCTCTTGAAACCAATACCAGAAAGGCCCGGTGCTCCAGCAGCTGCCCTTAGACTCTTGATTTCCCTTGCAGATGGGAGTGATACAAATAAATTAATACTTGCTGAAGCTGGAGCTCTGGAGGCTTTGAACAAATACCTGTCCTTGAGCCCTCAAGACACTACTGAGGCTACTATTTCTGACTTACTGAGAATATTATATTGCAATTCTGACCTAATTAATCATGAAGCATCGACAAATTCACTGAACCAACTCATAGCTGTTTTGCGTCTTGGTTCAAGAAATTCTAGATATAGTGCAGCTAGAGCACTCCATGAACTCTTTGATTCTGTGAATATTAGAGACTCAGAATTAGCTAAACAGGCCGTTCATCCATTGGTTGACATGCTGAATAATACGTCAGGAAGTGAGCAGGAGGCTGCTTTAATGGCCTTGGTCAAGTTAATGTCAGGAAATTCTTCAAAAGCATCTCTGTTTATTGATGTAGAAGGCAACCCCCTTGAAAGTTTACACAAAATATTGTCCTCCGCTTCATCCTTGGAGTTGAAGAATTATGCTGCGCAACTCTGCTTTGTACTGTTTGGTAATAGTAAGATCAGAGCAGAACGAATTGCCTCAGAATGCATAGAACCCCTTATATCACTGATGCAGTCTGATTCTGAGAGTGCGATAGAGTCTGGGGTTTGTGCTTTTGACAGATTGTTAGAAGATGAACATCAGGTAGAGCTTGCAGCAGCCTGCAACATCGTGGATTTCCTTGTCAGCTTGGTTTCTGGTACAAACTATCAGCTTATTGAGGCAACCATATCTGTTCTCCTCAGATTGGGCAAAGATAGGACTCCAACCAAATTAGACATGGTCAAATCTGGAATTATTAATAACTGTCTCAAGCTACTACCATTAGCACCTAGCTCATTATGCTCTACTATAGCTGAGCTGTTTCGCATCTTAACAAATAGTAATGCAATTGCCAGAAGTTCAGAGGCTGCAAAAATTGTAGAACCCCTTTTCCATGTTTTGCTATGTCGAGATTTCAACTTATGGGGACAGCATAGTGCCTTACAAGCACTTGTAAACATATTGGAAAAGCCACAAAGTCTTGCAACTTTAAAGCTTACACCTAGTGAAGTTATTGAACCCTTGATTTCTTTTCTGGAATCCCCATCCCAAGCTATTCAGCAACTTGGCACAGAACTCTTAGCTCATATTCTTGCACAGGAGCATTTTCAACAGGATATTTCAACAAAAAATGCAGTTCCACCTCTTGTACAGCTTGCAGGAATTGGAATATTGAACTTGCAACAAACAGCAATAAAAGCATTGGAAAAACTTTCCAAAACCTGGCCAAAGGCAGTTGCTGATGCCGGAGGTATTTTTGAGCTTGCAAAGGTTATTATTCAAGATGATCCTCAACCGCCACATGCACTCTGGGAATCAGCTGCTTTAGTTCTCTCTAATATATTATATTCTGATGCGGATTACTATTTTAAAGTTCCTGTGGCGGTTCTTGTAAAACTGTTAAACTCAAAAGTTGAGAATACAGTTAGCATAGCCCTTAACGCATTAGTAGTTCATGACACAAGTGATGCTTCAAGTGCTGAACAGATGGTGGAAGCTGGAGCTATAGATGCTCTGCTGGACCTTCTAAGATCTCATAATTGTGAAGAAGCATCTGGTAGATTACTCGAAGCTTTATTCAACAATGTGAAAGTACGAGAGATGAAGGTGTCGAAGTATGCTATAGCACCATTATCACAGTATCTATTAGATCCGCATACCAAATCAGAGCCTGGCAAGCTTCTTGCTGCTTTAGCTCTAGGAGATCTTTCACAGTACGAGGGACATGCTAGAGCTAGTGACTCAGTTTCTGCATGCCGTGCATTGATAAGTTTACTTGAAGATCAGCCAACTGAAGAAATGAAGATGGTGGCTATATGTGCATTGCAGAACTTCGTCATGAACAGCAGGACCAACAGAAGAGCTGTTGCAGAAGCTGGGGGCATATTGGTGATTCAGGAATTGCTGCTGTCTCTAAATACAGAAGTTGCTGCACAAGCAGCATTGCTGATCAAATTTTTGTTCTCTACCCACACTCTACAAGAATATGTGTCAAATGAGCTAATCAGGTCTTTGACAGCTTCATTGGAAAGAGAGTTGTGGTCAACTGCCACAATCAATGAAGAGGTTTTGAAAACACTGCATGTGATATTCATGAACTTCCCTAAGCTCCATGTGTCCGAAGCTGCAACACTTTGTATTCCTCATTTGGTAGGAGCTCTTAAATCTGGTGGTGAAGCAGCTCAGGACTCCGTACTTGATACCTTTTGCTTGCTGAAACAATCTTGGTCAACTATGCCAATAGATATTGCAAAGTCTCAGGCTATAGTTGCTGCTGAAGCGATCCCCATCTTGCAAATGCTCATGAAAACCTGCCCACCAAGCTTCCATGAGAAGGCAGATTCTCTTCTGCACTGCTTACCAGGTTGTTTGACTGTCATCATTAAGCGTGGAAATAACCTCAAGCAAACTATGGGAGGTACATATGCATTTTGCAGGTTGACAATAGGCAATGGTCCTCCAAACCAAACCAAGATGGTTCATGGTACTTCTCCAGAATGGAAAGAAGGATTCACGTGGGCATTTGATGTGCCTCCAAAGGGCCAAAAACTTCATATTGTGTGCAAAAGCAAGAATACTTTTGGGAAGCATGGATAA 6294 0.4139 MSKSPSLEKHQSVYSSSEPREFIMATEIEDPESTMSTVAKLVEQLHAKLSSAQEKELITTRLLGIARRRKDGRALIGTHSQAMPLFINILRNGTSLAKVNVATILSVLCKDEDLRLKVLLGGCVPPLLSILKYESTDARKAAAEAIYQVSIGGLSEDHVGMKIFVTEDVVPTLWNLLSPKNKQDKIVEGFITGALRNLCGDKDGYWNATLEAGGIEIIVDLLSSDNAVSQSNAASLLARLMSAFSGSIPKVIDSGAVKALVRLVGEENNISVRAGAADALEALSSKSTNAKKGIVDSDGVQILIGAIVAPSKECMQSDGGQALQGHATRALANLCGGMPALIIYLAELSCSPRLTAPVGDIIGALAYTLMVFEEKVDDDQDHFDATKIEDILVTLLKPRDNKLIQERVLEAMASLYGNVYLSKFLYQADSKKVLIGLITMAAIDVQGYLIRSLTSLCCDRVGIWEAIKKREGIQLLISMLGLSSEQHQEYSVELLAILTDQVEDSKWAITAAGGIPPLVQLLETGSQKAREEAAHVLWSLCCHSEDIRACVEIAGAIPAFLWLLKSGGPKGQEASALALMKLVRVADSATINQLLAMLLGDSPTSKGHIIRVLGHVLTVVSQKDLVEKGCAANKGLRCLVQVINASNEETQEFATSAIANLFTTRQDICDGLVNEDLVLPLMKLLTNKNQGVAIQSARALSSLSRPTNSKAANKLSYIVLEGDVQPLIKLAKTCCVDDAETSVAASESAVAASESAVAALANLLFDPYIAAEALAEDVVPALTRILEKGTLEGKQNASRALHELLKHFSVGDLLKGDEQCRLTLLALVDSLRSMHIDETEAADALDVIALLARTKHDVSLTYPPLLVLADKSCLEPLVCCLADGPPIVQDKAIEILSRLCGDQPVVLGDLLSSSSRCTGSLAHRIINSASLEVKVGAAALLICTVKDKKELSMDLLDTSGYQKPLIYSLVDMMKQSSNCSLLEIEVCTPRGFMEKNAFPEVDESEIPDAATVLGGTVALWLLSIIASVQVTNKLIILEAGGLEILSEKLARHVSNPQAQYEDTEEIWISALLLAILFQDTKVIQSPATMCTVPSLNLLLTSEEVIDKYFAAQAMASLVQNGDKGIGLAIANSGAVPGLITMIGHIETDMPNLMALSDEFSLVRTPDQVVLDHLFEIEDVRLGSVARKSIPLLVDLLKPIPERPGAPAAALRLLISLADGSDTNKLILAEAGALEALNKYLSLSPQDTTEATISDLLRILYCNSDLINHEASTNSLNQLIAVLRLGSRNSRYSAARALHELFDSVNIRDSELAKQAVHPLVDMLNNTSGSEQEAALMALVKLMSGNSSKASLFIDVEGNPLESLHKILSSASSLELKNYAAQLCFVLFGNSKIRAERIASECIEPLISLMQSDSESAIESGVCAFDRLLEDEHQVELAAACNIVDFLVSLVSGTNYQLIEATISVLLRLGKDRTPTKLDMVKSGIINNCLKLLPLAPSSLCSTIAELFRILTNSNAIARSSEAAKIVEPLFHVLLCRDFNLWGQHSALQALVNILEKPQSLATLKLTPSEVIEPLISFLESPSQAIQQLGTELLAHILAQEHFQQDISTKNAVPPLVQLAGIGILNLQQTAIKALEKLSKTWPKAVADAGGIFELAKVIIQDDPQPPHALWESAALVLSNILYSDADYYFKVPVAVLVKLLNSKVENTVSIALNALVVHDTSDASSAEQMVEAGAIDALLDLLRSHNCEEASGRLLEALFNNVKVREMKVSKYAIAPLSQYLLDPHTKSEPGKLLAALALGDLSQYEGHARASDSVSACRALISLLEDQPTEEMKMVAICALQNFVMNSRTNRRAVAEAGGILVIQELLLSLNTEVAAQAALLIKFLFSTHTLQEYVSNELIRSLTASLERELWSTATINEEVLKTLHVIFMNFPKLHVSEAATLCIPHLVGALKSGGEAAQDSVLDTFCLLKQSWSTMPIDIAKSQAIVAAEAIPILQMLMKTCPPSFHEKADSLLHCLPGCLTVIIKRGNNLKQTMGGTYAFCRLTIGNGPPNQTKMVHGTSPEWKEGFTWAFDVPPKGQKLHIVCKSKNTFGKHG 2097
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01386 2097 Gene3D - 748 988 IPR011989 -
Arst8g01386 2097 Gene3D - 1177 1379 IPR011989 -
Arst8g01386 2097 Gene3D - 1562 1757 IPR011989 -
Arst8g01386 2097 Gene3D - 1380 1561 IPR011989 -
Arst8g01386 2097 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 255 299 IPR000225 GO:0005515
Arst8g01386 2097 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 513 555 IPR000225 GO:0005515
Arst8g01386 2097 SUPERFAMILY ARM repeat 635 975 IPR016024 -
Arst8g01386 2097 SMART arm_5 665 705 IPR000225 GO:0005515
Arst8g01386 2097 SMART arm_5 544 584 IPR000225 GO:0005515
Arst8g01386 2097 SMART arm_5 111 151 IPR000225 GO:0005515
Arst8g01386 2097 SMART arm_5 1220 1260 IPR000225 GO:0005515
Arst8g01386 2097 SMART arm_5 1722 1763 IPR000225 GO:0005515
Arst8g01386 2097 SMART arm_5 287 336 IPR000225 GO:0005515
Arst8g01386 2097 SMART arm_5 861 901 IPR000225 GO:0005515
Arst8g01386 2097 SMART arm_5 1389 1429 IPR000225 GO:0005515
Arst8g01386 2097 SMART arm_5 1598 1639 IPR000225 GO:0005515
Arst8g01386 2097 SMART arm_5 244 285 IPR000225 GO:0005515
Arst8g01386 2097 SMART arm_5 1848 1888 IPR000225 GO:0005515
Arst8g01386 2097 SMART arm_5 623 663 IPR000225 GO:0005515
Arst8g01386 2097 SMART arm_5 201 242 IPR000225 GO:0005515
Arst8g01386 2097 SMART arm_5 460 500 IPR000225 GO:0005515
Arst8g01386 2097 SMART arm_5 1430 1470 IPR000225 GO:0005515
Arst8g01386 2097 SMART arm_5 158 200 IPR000225 GO:0005515
Arst8g01386 2097 SMART arm_5 766 806 IPR000225 GO:0005515
Arst8g01386 2097 SMART arm_5 501 542 IPR000225 GO:0005515
Arst8g01386 2097 Pfam Armadillo/beta-catenin-like repeat 506 541 IPR000225 GO:0005515
Arst8g01386 2097 SUPERFAMILY ARM repeat 77 309 IPR016024 -
Arst8g01386 2097 SUPERFAMILY ARM repeat 1189 1581 IPR016024 -
Arst8g01386 2097 CDD C2 2023 2096 - -
Arst8g01386 2097 ProSiteProfiles C2 domain profile. 2002 2097 IPR000008 -
Arst8g01386 2097 PANTHER PROTEIN CELLULOSE SYNTHASE INTERACTIVE 1 10 2096 IPR044297 GO:0008017|GO:0010330|GO:0051211|GO:2001006
Arst8g01386 2097 PANTHER PROTEIN CELLULOSE SYNTHASE INTERACTIVE 1 10 2096 IPR044297 GO:0008017|GO:0010330|GO:0051211|GO:2001006
Arst8g01386 2097 SUPERFAMILY ARM repeat 924 1144 IPR016024 -
Arst8g01386 2097 Gene3D - 23 245 IPR011989 -
Arst8g01386 2097 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2020 2096 IPR035892 -
Arst8g01386 2097 Gene3D - 1015 1165 IPR011989 -
Arst8g01386 2097 Gene3D - 363 625 IPR011989 -
Arst8g01386 2097 Gene3D - 1758 2017 IPR011989 -
Arst8g01386 2097 SUPERFAMILY ARM repeat 1626 2019 IPR016024 -
Arst8g01386 2097 SUPERFAMILY ARM repeat 383 730 IPR016024 -
Arst8g01386 2097 Gene3D - 626 747 IPR011989 -
Arst8g01386 2097 Gene3D - 249 362 IPR011989 -
Arst8g01386 2097 Gene3D C2 domain 2021 2097 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01386 Arst-Chr8 21604858 21618347 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01386 459 582 U-box Gene Family AT3G46510 39.516 9.87e-12 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01386 - - gmx:100796864 3303.46