Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01382 ATGTCAAAGTCTCCCTCTCTTGAGAAGCACCAGTCCGTTTATTCTTCTTCTGAGCCTAGGGAGTTTATTATGGCTACAGAAATAGAGGATCCCGAGTCTACTATGTCAACAGTTGCTAAGCTTGTGGAGCAACTGCATGCCAAGTTGTCATCAGCACAAGAGAAGGAACTTATCACAACACGATTGCTAGGTATTGCCAGGAGAAGAAAGGATGGCAGGGCACTTATTGGCACTCATTCTCAAGCGATGCCATTGTTCATAAACATTCTTAGAAATGGAACCTCTCTTGCGAAAGTTAATGTTGCTACTATTCTCAGTGTACTGTGCAAAGATGAAGACTTGAGGTTAAAAGTTCTTCTTGGTGGTTGTGTCCCACCATTGCTGTCAATTTTAAAATATGAATCAACTGATGCAAGAAAGGCGGCAGCTGAAGCAATATATCAAGTTTCCATCGGAGGTCTGTCAGAAGATCATGTTGGTATGAAAATTTTTGTTACAGAAGATGTAGTTCCAACGTTGTGGAATCTACTAAGTCCTAAGAACAAGCAAGACAAAATTGTTGAGGGTTTTATTACTGGAGCATTAAGAAATTTGTGTGGTGACAAAGATGGCTACTGGAATGCAACATTAGAAGCTGGAGGTATTGAAATCATTGTGGATCTCTTGTCTTCAGACAATGCTGTTTCTCAGTCAAATGCAGCTTCTCTGTTGGCACGTCTAATGTCGGCTTTCAGTGGTAGCATCCCAAAAGTAATAGACTCTGGAGCAGTTAAAGCTTTAGTTCGACTTGTAGGGGAGGAAAACAATATTTCTGTTCGAGCTGGTGCTGCTGATGCTCTAGAGGCCCTTTCTTCAAAGTCAACCAATGCGAAGAAAGGTATTGTTGATTCTGATGGTGTTCAAATCCTTATTGGAGCCATAGTTGCTCCTTCAAAAGAATGTATGCAATCTGATGGCGGCCAGGCTCTTCAAGGGCATGCAACACGAGCTCTAGCCAATTTATGTGGTGGCATGCCTGCATTAATAATATATCTTGCAGAACTTTCCTGTTCTCCTCGTTTGACAGCTCCAGTTGGTGATATAATAGGCGCTCTTGCTTACACCCTTATGGTCTTTGAGGAAAAAGTTGATGATGATCAGGATCATTTTGATGCAACTAAGATAGAGGATATTTTAGTAACTCTTTTAAAGCCTCGAGATAACAAGCTTATTCAAGAGCGTGTCCTTGAGGCCATGGCTAGCCTATATGGTAATGTCTATCTCTCGAAGTTTCTCTATCAAGCAGACTCAAAGAAGGTTCTCATTGGGCTTATAACTATGGCTGCCATTGATGTGCAAGGGTATTTGATACGTTCACTGACAAGCTTGTGCTGTGACAGGGTAGGAATATGGGAGGCGATAAAAAAAAGAGAAGGTATTCAGTTACTTATATCTATGCTGGGATTATCTAGTGAGCAGCATCAAGAGTACTCGGTTGAACTGCTAGCAATCTTAACTGACCAAGTTGAGGACAGCAAGTGGGCAATCACTGCTGCTGGAGGGATTCCACCATTGGTGCAGTTGCTGGAGACAGGATCGCAAAAAGCAAGAGAGGAAGCAGCTCATGTTCTTTGGAGTTTGTGTTGTCACAGTGAAGACATCCGTGCTTGCGTTGAAATTGCTGGGGCCATTCCAGCATTTCTGTGGCTTCTTAAGAGTGGTGGACCAAAAGGACAAGAAGCTTCTGCTTTGGCACTGATGAAGCTTGTCAGAGTTGCTGATTCTGCAACGATAAATCAGCTATTAGCAATGCTCCTAGGAGATTCTCCAACCTCAAAGGGACATATAATCCGAGTTTTAGGTCATGTACTTACTGTGGTTTCACAGAAAGATCTTGTGGAAAAGGGATGTGCAGCAAATAAAGGCCTAAGATGTCTTGTTCAGGTTATCAATGCATCAAATGAGGAAACCCAAGAATTTGCAACTTCAGCGATAGCTAATTTATTTACCACAAGACAAGACATTTGTGATGGTCTAGTAAATGAAGACCTTGTGCTTCCTTTAATGAAGCTTCTGACTAACAAAAATCAAGGTGTGGCCATTCAGTCAGCTCGAGCATTAAGTTCTCTATCACGTCCAACCAATAGCAAAGCTGCAAATAAGTTGTCTTATATAGTACTTGAAGGAGATGTTCAACCACTAATTAAGTTGGCTAAAACATGCTGTGTGGATGATGCAGAAACTTCTGTTGCTGCTTCTGAATCTGCTGTTGCTGCTTCTGAATCTGCTGTTGCTGCATTGGCCAACCTTCTTTTTGATCCTTATATTGCTGCCGAGGCCCTGGCTGAAGATGTTGTTCCAGCTTTAACAAGAATTCTGGAGAAAGGAACCTTGGAAGGTAAACAAAATGCATCACGAGCTCTTCATGAATTATTGAAGCATTTTTCAGTAGGAGATCTTCTTAAGGGAGACGAACAGTGCCGTTTAACTTTGCTAGCCCTTGTTGATTCGTTAAGATCTATGCATATAGATGAGACTGAAGCTGCAGATGCTTTAGATGTGATTGCATTGCTAGCTAGGACAAAACATGATGTCAGCCTCACTTATCCTCCATTGTTGGTTCTGGCTGATAAATCTTGCTTAGAACCCCTTGTCTGCTGCCTTGCTGATGGTCCACCTATTGTGCAAGACAAGGCAATTGAAATTTTGTCCAGACTTTGTGGAGATCAGCCAGTTGTTCTTGGTGACTTGTTGTCTTCTAGTTCCAGATGCACTGGATCATTAGCTCATAGAATAATTAACTCTGCTAGTTTAGAAGTAAAAGTTGGAGCAGCTGCCTTACTAATTTGCACTGTAAAGGATAAGAAAGAGCTCTCAATGGATTTGCTTGACACTTCTGGATATCAAAAACCATTGATTTACTCCTTAGTTGACATGATGAAGCAAAGTTCTAATTGTTCATTGTTAGAAATCGAAGTTTGCACCCCTAGAGGTTTTATGGAGAAGAATGCATTTCCAGAAGTTGATGAGTCAGAAATTCCTGATGCAGCCACAGTCTTGGGTGGTACTGTTGCCTTGTGGTTACTCTCAATTATTGCTTCTGTCCAGGTAACAAACAAATTAATAATTTTGGAAGCTGGTGGACTGGAAATTCTCTCTGAGAAACTTGCAAGACATGTCTCAAATCCACAGGCACAATATGAGGATACTGAAGAAATATGGATCAGCGCATTACTCTTGGCCATTTTATTTCAAGATACAAAGGTCATTCAATCTCCTGCAACAATGTGCACTGTACCTTCTCTGAATCTACTTCTAACATCTGAGGAAGTAATTGACAAATATTTTGCTGCCCAGGCTATGGCTAGTCTTGTTCAAAATGGTGATAAGGGAATAGGTCTTGCCATTGCAAATTCTGGTGCTGTCCCAGGATTGATAACTATGATTGGGCATATAGAAACAGATATGCCAAATCTCATGGCTTTATCAGATGAGTTTTCCTTGGTGCGAACTCCTGATCAAGTTGTTTTGGATCATCTATTTGAAATTGAGGATGTAAGACTGGGATCTGTTGCACGGAAATCTATACCTCTTTTAGTAGATCTCTTGAAACCAATACCAGAAAGGCCCGGTGCTCCAGCAGCTGCCCTTAGACTCTTGATTTCCCTTGCAGATGGGAGTGATACAAATAAATTAATACTTGCTGAAGCTGGAGCTCTGGAGGCTTTGAACAAATACCTGTCCTTGAGCCCTCAAGACACTACTGAGGCTACTATTTCTGACTTACTGAGAATATTATATTGCAATTCTGACCTAATTAATCATGAAGCATCGACAAATTCACTGAACCAACTCATAGCTGTTTTGCGTCTTGGTTCAAGAAATTCTAGATATAGTGCAGCTAGAGCACTCCATGAACTCTTTGATTCTGTGAATATTAGAGACTCAGAATTAGCTAAACAGGCCGTTCATCCATTGGTTGACATGCTGAATAATACGTCAGGAAGTGAGCAGGAGGCTGCTTTAATGGCCTTGGTCAAGTTAATGTCAGGAAATTCTTCAAAAGCATCTCTGTTTATTGATGTAGAAGGCAACCCCCTTGAAAGTTTACACAAAATATTGTCCTCCGCTTCATCCTTGGAGTTGAAGAATTATGCTGCGCAACTCTGCTTTGTACTGTTTGGTAATAGTAAGATCAGAGCAGAACGAATTGCCTCAGAATGCATAGAACCCCTTATATCACTGATGCAGTCTGATTCTGAGAGTGCGATAGAGTCTGGGGTTTGTGCTTTTGACAGATTGTTAGAAGATGAACATCAGGTAGAGCTTGCAGCAGCCTGCAACATCGTGGATTTCCTTGTCAGCTTGGTTTCTGGTACAAACTATCAGCTTATTGAGGCAACCATATCTGTTCTCCTCAGATTGGGCAAAGATAGGACTCCAACCAAATTAGACATGGTCAAATCTGGAATTATTAATAACTGTCTCAAGCTACTACCATTAGCACCTAGCTCATTATGCTCTACTATAGCTGAGCTGTTTCGCATCTTAACAAATAGTAATGCAATTGCCAGAAGTTCAGAGGCTGCAAAAATTGTAGAACCCCTTTTCCATGTTTTGCTATGTCGAGATTTCAACTTATGGGGACAGCATAGTGCCTTACAAGCACTTGTAAACATATTGGAAAAGCCACAAAGTCTTGCAACTTTAAAGCTTACACCTAGTGAAGTTATTGAACCCTTGATTTCTTTTCTGGAATCCCCATCCCAAGCTATTCAGCAACTTGGCACAGAACTCTTAGCTCATATTCTTGCACAGGAGCATTTTCAACAGGATATTTCAACAAAAAATGCAGTTCCACCTCTTGTACAGCTTGCAGGAATTGGAATATTGAACTTGCAACAAACAGCAATAAAAGCATTGGAAAAACTTTCCAAAACCTGGCCAAAGGCAGTTGCTGATGCCGGAGGTATTTTTGAGCTTGCAAAGGTTATTATTCAAGATGATCCTCAACCGCCACATGCACTCTGGGAATCAGCTGCTTTAGTTCTCTCTAATATATTATATTCTGATGCGGATTACTATTTTAAAGTTCCTGTGGCGGTTCTTGTAAAACTGTTAAACTCAAAAGTTGAGAATACAGTTAGCATAGCCCTTAACGCATTAGTAGTTCATGACACAAGTGATGCTTCAAGTGCTGAACAGATGGTGGAAGCTGGAGCTATAGATGCTCTGCTGGACCTTCTAAGATCTCATAATTGTGAAGAAGCATCTGGTAGATTACTCGAAGCTTTATTCAACAATGTGAAAGTACGAGAGATGAAGGTGTCGAAGTATGCTATAGCACCATTATCACAGTATCTATTAGATCCGCATACCAAATCAGAGCCTGGCAAGCTTCTTGCTGCTTTAGCTCTAGGAGATCTTTCACAGTACGAGGGACATGCTAGAGCTAGTGACTCAGTTTCTGCATGCCGTGCATTGATAAGTTTACTTGAAGATCAGCCAACTGAAGAAATGAAGATGGTGGCTATATGTGCATTGCAGAACTTCGTCATGAACAGCAGGACCAACAGAAGAGCTGTTGCAGAAGCTGGGGGCATATTGGTGATTCAGGAATTGCTGCTGTCTCTAAATACAGAAGTTGCTGCACAAGCAGCATTGCTGATCAAATTTTTGTTCTCTACCCACACTCTACAAGAATATGTGTCAAATGAGCTAATCAGGTCTTTGACAGGAGCTCTTAAATCTGGTGGTGAAGCAGCTCAGGACTCCGTACTTGATACCTTTTGCTTGCTGAAACAATCTTGGTCAACTATGCCAATAGATATTGCAAAGTCTCAGGCTATAGTTGCTGCTGAAGCGATCCCCATCTTGCAAATGCTCATGAAAACCTGCCCACCAAGCTTCCATGAGAAGGCAGATTCTCTTCTGCACTGCTTACCAGGTTGTTTGACTGTCATCATTAAGCGTGGAAATAACCTCAAGCAAACTATGGGAGGTACATATGCATTTTGCAGGTTGACAATAGGCAATGGTCCTCCAAACCAAACCAAGATGGTTCATGGTACTTCTCCAGAATGGAAAGAAGGATTCACGTGGGCATTTGATGTGCCTCCAAAGGGCCAAAAACTTCATATTGTGTGCAAAAGCAAGAATACTTTTGGGAAGACAACTCTCGGAAGAGTCACTATCCAAATCGATAAAGTTGTGACTGAAGGAGTTTATAGCGGAATATTCAGTCTTAATCATCATGATGGCAATAAAGACGGTTCATCCCGAACTCTTGAAATTGAGGTTATGTGGTCCAATAGGATTTCTGATGAAGATATTTAA 6315 0.4128 MSKSPSLEKHQSVYSSSEPREFIMATEIEDPESTMSTVAKLVEQLHAKLSSAQEKELITTRLLGIARRRKDGRALIGTHSQAMPLFINILRNGTSLAKVNVATILSVLCKDEDLRLKVLLGGCVPPLLSILKYESTDARKAAAEAIYQVSIGGLSEDHVGMKIFVTEDVVPTLWNLLSPKNKQDKIVEGFITGALRNLCGDKDGYWNATLEAGGIEIIVDLLSSDNAVSQSNAASLLARLMSAFSGSIPKVIDSGAVKALVRLVGEENNISVRAGAADALEALSSKSTNAKKGIVDSDGVQILIGAIVAPSKECMQSDGGQALQGHATRALANLCGGMPALIIYLAELSCSPRLTAPVGDIIGALAYTLMVFEEKVDDDQDHFDATKIEDILVTLLKPRDNKLIQERVLEAMASLYGNVYLSKFLYQADSKKVLIGLITMAAIDVQGYLIRSLTSLCCDRVGIWEAIKKREGIQLLISMLGLSSEQHQEYSVELLAILTDQVEDSKWAITAAGGIPPLVQLLETGSQKAREEAAHVLWSLCCHSEDIRACVEIAGAIPAFLWLLKSGGPKGQEASALALMKLVRVADSATINQLLAMLLGDSPTSKGHIIRVLGHVLTVVSQKDLVEKGCAANKGLRCLVQVINASNEETQEFATSAIANLFTTRQDICDGLVNEDLVLPLMKLLTNKNQGVAIQSARALSSLSRPTNSKAANKLSYIVLEGDVQPLIKLAKTCCVDDAETSVAASESAVAASESAVAALANLLFDPYIAAEALAEDVVPALTRILEKGTLEGKQNASRALHELLKHFSVGDLLKGDEQCRLTLLALVDSLRSMHIDETEAADALDVIALLARTKHDVSLTYPPLLVLADKSCLEPLVCCLADGPPIVQDKAIEILSRLCGDQPVVLGDLLSSSSRCTGSLAHRIINSASLEVKVGAAALLICTVKDKKELSMDLLDTSGYQKPLIYSLVDMMKQSSNCSLLEIEVCTPRGFMEKNAFPEVDESEIPDAATVLGGTVALWLLSIIASVQVTNKLIILEAGGLEILSEKLARHVSNPQAQYEDTEEIWISALLLAILFQDTKVIQSPATMCTVPSLNLLLTSEEVIDKYFAAQAMASLVQNGDKGIGLAIANSGAVPGLITMIGHIETDMPNLMALSDEFSLVRTPDQVVLDHLFEIEDVRLGSVARKSIPLLVDLLKPIPERPGAPAAALRLLISLADGSDTNKLILAEAGALEALNKYLSLSPQDTTEATISDLLRILYCNSDLINHEASTNSLNQLIAVLRLGSRNSRYSAARALHELFDSVNIRDSELAKQAVHPLVDMLNNTSGSEQEAALMALVKLMSGNSSKASLFIDVEGNPLESLHKILSSASSLELKNYAAQLCFVLFGNSKIRAERIASECIEPLISLMQSDSESAIESGVCAFDRLLEDEHQVELAAACNIVDFLVSLVSGTNYQLIEATISVLLRLGKDRTPTKLDMVKSGIINNCLKLLPLAPSSLCSTIAELFRILTNSNAIARSSEAAKIVEPLFHVLLCRDFNLWGQHSALQALVNILEKPQSLATLKLTPSEVIEPLISFLESPSQAIQQLGTELLAHILAQEHFQQDISTKNAVPPLVQLAGIGILNLQQTAIKALEKLSKTWPKAVADAGGIFELAKVIIQDDPQPPHALWESAALVLSNILYSDADYYFKVPVAVLVKLLNSKVENTVSIALNALVVHDTSDASSAEQMVEAGAIDALLDLLRSHNCEEASGRLLEALFNNVKVREMKVSKYAIAPLSQYLLDPHTKSEPGKLLAALALGDLSQYEGHARASDSVSACRALISLLEDQPTEEMKMVAICALQNFVMNSRTNRRAVAEAGGILVIQELLLSLNTEVAAQAALLIKFLFSTHTLQEYVSNELIRSLTGALKSGGEAAQDSVLDTFCLLKQSWSTMPIDIAKSQAIVAAEAIPILQMLMKTCPPSFHEKADSLLHCLPGCLTVIIKRGNNLKQTMGGTYAFCRLTIGNGPPNQTKMVHGTSPEWKEGFTWAFDVPPKGQKLHIVCKSKNTFGKTTLGRVTIQIDKVVTEGVYSGIFSLNHHDGNKDGSSRTLEIEVMWSNRISDEDI 2104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01382 2104 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 255 299 IPR000225 GO:0005515
Arst8g01382 2104 SUPERFAMILY ARM repeat 1571 1973 IPR016024 -
Arst8g01382 2104 Pfam Armadillo/beta-catenin-like repeat 506 541 IPR000225 GO:0005515
Arst8g01382 2104 SUPERFAMILY ARM repeat 926 1144 IPR016024 -
Arst8g01382 2104 CDD C2 1978 2067 - -
Arst8g01382 2104 Gene3D - 246 382 IPR011989 -
Arst8g01382 2104 Gene3D - 866 1156 IPR011989 -
Arst8g01382 2104 Gene3D C2 domain 1976 2099 IPR035892 -
Arst8g01382 2104 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 513 555 IPR000225 GO:0005515
Arst8g01382 2104 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 1975 2094 IPR035892 -
Arst8g01382 2104 Gene3D - 1308 1621 IPR011989 -
Arst8g01382 2104 Gene3D - 1624 1975 IPR011989 -
Arst8g01382 2104 PANTHER PROTEIN CELLULOSE SYNTHASE INTERACTIVE 1 1904 2098 IPR044297 GO:0008017|GO:0010330|GO:0051211|GO:2001006
Arst8g01382 2104 PANTHER PROTEIN CELLULOSE SYNTHASE INTERACTIVE 1 1904 2098 IPR044297 GO:0008017|GO:0010330|GO:0051211|GO:2001006
Arst8g01382 2104 Pfam C2 domain 1977 2075 IPR000008 -
Arst8g01382 2104 Gene3D - 632 861 IPR011989 -
Arst8g01382 2104 SUPERFAMILY ARM repeat 383 730 IPR016024 -
Arst8g01382 2104 Gene3D - 384 631 IPR011989 -
Arst8g01382 2104 Gene3D - 20 245 IPR011989 -
Arst8g01382 2104 SMART arm_5 665 705 IPR000225 GO:0005515
Arst8g01382 2104 SMART arm_5 544 584 IPR000225 GO:0005515
Arst8g01382 2104 SMART arm_5 111 151 IPR000225 GO:0005515
Arst8g01382 2104 SMART arm_5 1220 1260 IPR000225 GO:0005515
Arst8g01382 2104 SMART arm_5 1722 1763 IPR000225 GO:0005515
Arst8g01382 2104 SMART arm_5 287 336 IPR000225 GO:0005515
Arst8g01382 2104 SMART arm_5 861 901 IPR000225 GO:0005515
Arst8g01382 2104 SMART arm_5 1389 1429 IPR000225 GO:0005515
Arst8g01382 2104 SMART arm_5 1598 1639 IPR000225 GO:0005515
Arst8g01382 2104 SMART arm_5 244 285 IPR000225 GO:0005515
Arst8g01382 2104 SMART arm_5 1848 1888 IPR000225 GO:0005515
Arst8g01382 2104 SMART arm_5 623 663 IPR000225 GO:0005515
Arst8g01382 2104 SMART arm_5 201 242 IPR000225 GO:0005515
Arst8g01382 2104 SMART arm_5 460 500 IPR000225 GO:0005515
Arst8g01382 2104 SMART arm_5 1430 1470 IPR000225 GO:0005515
Arst8g01382 2104 SMART arm_5 158 200 IPR000225 GO:0005515
Arst8g01382 2104 SMART arm_5 766 806 IPR000225 GO:0005515
Arst8g01382 2104 SMART arm_5 501 542 IPR000225 GO:0005515
Arst8g01382 2104 SUPERFAMILY ARM repeat 77 309 IPR016024 -
Arst8g01382 2104 SUPERFAMILY ARM repeat 1189 1558 IPR016024 -
Arst8g01382 2104 ProSiteProfiles C2 domain profile. 1957 2073 IPR000008 -
Arst8g01382 2104 Gene3D - 1179 1307 IPR011989 -
Arst8g01382 2104 SUPERFAMILY ARM repeat 635 975 IPR016024 -
Arst8g01382 2104 SMART C2_3c 1977 2072 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01382 Arst-Chr8 21604438 21618347 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01382 459 582 U-box Gene Family AT3G46510 39.516 1.00e-11 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01382 - - gmx:100796864 3288.82