Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01368 ATGGAGGATGGCCCCGAGCGGCTAGTTGAGAACTCTCATGAAAATTCAGAAATGGAGGTTGTTGACGATGACGATGCCGCTTTGCAGCGCCAGCACCATTCAGAAAAGGATCAGAATGTGGATTCCAACTCCCCTGCTCAGCTCCAACAGGATCATGTCATGTTCGATCGGCAAAGTGATGACAACAAGAATGCCAATTCTGCTCTTCTTTCTGTGCTAGAGACCAAGACGGATAGTAGTAACACGCGCCATGAGAATCGCTTTCAAGATCTTAAAGTCCATTCGCACCATGAATTGCTCACTCCGAAGCCTAAAGAGAGGAATGTTAGGGAAATGAAAAACGTGCTCCATGATACTGAGATGACTGATTATGATGAGTCTGGTTCGTACTCCGAACGAGAAGCATTTATGAGAGAGCTGGAGAGTTTCTATAGAGAGAGATCCTTGGAGTTCAAGCCTCCTAAGTTTTATGGAGAGCCACTAAATTGCCTCAAGTTATGGAGAGCTGTCATCAAACTTGGTGGCTACGATGTGGTAACTGGATCCAAGTTGTGGCGGCAAGTAGGAGAGTCTTTCCATCCACCCAAGACTTGCACTACAGTCTCATGGACGTTTAGAATCTTTTATGAGAAGGCACTTTTAGAGTATGAAAAGTATAAGAGAGAAATTGGGGAGCTACAGCTCCCTGTTGGATCATTTCATCAATCTTCAAGTGTGGAAAAAGAGACTGCTGTTTACCAGGCTCCAGGCTCTGGCTCTGGCAGGGCACGAAGGGATGCGGCAGCACGTGCAATGCAAGGTTGGCATGCCCAGCGCCTTCTTGGATATGGTGAGGTTGCTGAGCCAGTTATTAAGGATAAGAACTCCAATTCTACTCCGAAACGAGAAAAGAACCTCAAAAGTATTGGTATGCTAAATAAACACAGGACACCATCTGTTCTTGAGCATGCTGGGAAAGCTGCAAATATTGAAGGAGATAGACAATTGGTCACGGCAGTTGTAGATGTTGGACCCCCAGCAGACTGGGTGAAGGTCAATGTGCGAGAAACTGTGCGAGTCCAATCTGATCCAGTTGGTCGTCTAGTTATAACTGGTCTCCCAGAACATGTTGACAATCCATGGGGAATTACCCCTTTCAAGAAGGTTGTGAACTTACCTGCAAGAATTGATCCGCTTCAGACATCTGCTGTAGTTAGTTTGCATGGCCGACTGTTTGTACGTGTTCCCTTTGAGCAGGGAGCTGTGTAA 1248 0.4623 MEDGPERLVENSHENSEMEVVDDDDAALQRQHHSEKDQNVDSNSPAQLQQDHVMFDRQSDDNKNANSALLSVLETKTDSSNTRHENRFQDLKVHSHHELLTPKPKERNVREMKNVLHDTEMTDYDESGSYSEREAFMRELESFYRERSLEFKPPKFYGEPLNCLKLWRAVIKLGGYDVVTGSKLWRQVGESFHPPKTCTTVSWTFRIFYEKALLEYEKYKREIGELQLPVGSFHQSSSVEKETAVYQAPGSGSGRARRDAAARAMQGWHAQRLLGYGEVAEPVIKDKNSNSTPKREKNLKSIGMLNKHRTPSVLEHAGKAANIEGDRQLVTAVVDVGPPADWVKVNVRETVRVQSDPVGRLVITGLPEHVDNPWGITPFKKVVNLPARIDPLQTSAVVSLHGRLFVRVPFEQGAV 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01368 415 FunFam AT-rich interactive domain-containing protein 3 130 229 - -
Arst8g01368 415 MobiDBLite consensus disorder prediction 23 39 - -
Arst8g01368 415 Pfam ARID/BRIGHT DNA binding domain 132 217 IPR001606 GO:0003677
Arst8g01368 415 SUPERFAMILY ARID-like 120 228 IPR036431 GO:0003677
Arst8g01368 415 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN ARID DOMAIN- CONTAINING PROTEIN DEAD RINGER PROTEIN B-CELL REGULATOR OF IGH TRANSCRIPTION BRIGHT 16 412 IPR045147 GO:0006357
Arst8g01368 415 MobiDBLite consensus disorder prediction 1 16 - -
Arst8g01368 415 SMART bright_3 131 222 IPR001606 GO:0003677
Arst8g01368 415 CDD ARID 132 217 - -
Arst8g01368 415 Gene3D - 130 228 IPR036431 GO:0003677
Arst8g01368 415 ProSiteProfiles ARID domain profile. 130 221 IPR001606 GO:0003677
Arst8g01368 415 MobiDBLite consensus disorder prediction 1 62 - -
Arst8g01368 415 SMART ARID_2 127 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01368 Arst-Chr8 20179291 20184295 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01368 101 412 ARID Transcription Factor Family AT1G76510 64.264 5.22e-138 400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Arst8g01368 ARID 4.3e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01368 - - adu:107461292 817.379