Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01366 ATGGCAGGGTTCAGCACCAACAATAACAATAACGAAGGAAGAGATCACTTCAATTTAGGGCGCTTTGTTCCACATCTTTTCAATCTCCACCTCCAAACCCCTAACAACAACAACAACAACAACAACCCCTTAACGCATCACCACCACCACCAACAACAATTCGACTCTCCTCCTCCTCCTGCACCTGCTGAAGCTGACGGTGATGCTGCTGGTGGTTCAAGAAGCGGAGCAGTATCCGCTGAACCCTCAACTGGGCGCCGTCCGAGGGGCCGTCCAGCAGGATCCAAGAACAAGCCCAAACCGCCTATCGTAGTCACGCGGGACAGCCCCAATGCACTCCGCTGTCACGTGCTTGAGGTCTCCGCCGGGGCGGAGCTCCTCGACGCACTCTCCACCTACGCTCGCCGGAGGGGGAGAGGCGTTTGCGTCCTCAGCGGCACTGGCACCCTCGCTAACGTTACGCTTCGCCAGCCTGGAGGCACAGTCGTAACCCTTCACGGAACCTTCGAGATCCTCTCCATCACCGGGACAATTCTCCCGCCGCCTGCTCCACCTGGATCCGGAGGGATTTCGGTGTACCTGTCCGGCGGGCAAGGGCAGGTGGTCGGGGGGAACGTGGTGGCTCCTCTTGTGGCTTCAGCTGTTGTGGTTCTGATGGCTGCTTCGTTTGCAAATGCAATGTTTGAGAGATTGCCTTTGAATTTGGACGATGATGATCCTCGTGAGGACGATGACCACTTCAATCACCAACGACAACCTGCAGCATCGCAATCCTCTGGCGTAACTGGCCAGATCGCCGACGGCGCCAGCAGTGGTGGTCGCGCTGTTTCTTTCTTCAATTCGGCTGCAGGTGTTGGTGGTGGAGGAAGGGGTTTGAACGGCAGAAGCGGCTATCCCTTGTCGCTTCCCAGCGGCGGCGATCTATTTGGATGGGGCGGTGGTGGTGGTGCAGGTGCAAGTGCAGCAGCGGCGATCAAGCCTCCACCGTTCTAG 993 0.578 MAGFSTNNNNNEGRDHFNLGRFVPHLFNLHLQTPNNNNNNNNPLTHHHHHQQQFDSPPPPAPAEADGDAAGGSRSGAVSAEPSTGRRPRGRPAGSKNKPKPPIVVTRDSPNALRCHVLEVSAGAELLDALSTYARRRGRGVCVLSGTGTLANVTLRQPGGTVVTLHGTFEILSITGTILPPPAPPGSGGISVYLSGGQGQVVGGNVVAPLVASAVVVLMAASFANAMFERLPLNLDDDDPREDDDHFNHQRQPAASQSSGVTGQIADGASSGGRAVSFFNSAAGVGGGGRGLNGRSGYPLSLPSGGDLFGWGGGGGAGASAAAAIKPPPF 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01366 330 ProSiteProfiles PPC domain profile profile. 110 250 IPR005175 -
Arst8g01366 330 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 34 259 IPR014476 GO:0003680
Arst8g01366 330 Pfam Plants and Prokaryotes Conserved (PCC) domain 114 224 IPR005175 -
Arst8g01366 330 CDD DUF296 114 179 IPR005175 -
Arst8g01366 330 Gene3D - 113 236 - -
Arst8g01366 330 FunFam AT-hook motif nuclear-localized protein 113 240 - -
Arst8g01366 330 MobiDBLite consensus disorder prediction 30 47 - -
Arst8g01366 330 MobiDBLite consensus disorder prediction 235 268 - -
Arst8g01366 330 SUPERFAMILY AF0104/ALDC/Ptd012-like 111 233 - -
Arst8g01366 330 MobiDBLite consensus disorder prediction 235 250 - -
Arst8g01366 330 MobiDBLite consensus disorder prediction 251 266 - -
Arst8g01366 330 MobiDBLite consensus disorder prediction 30 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01366 Arst-Chr8 20174672 20176321 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01366 83 234 AT-hook Motif Nuclear Localized (AHL) Family AT1G76500 72.393 7.62e-67 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01366 - - aip:107609871 450.669