Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01355 ATGACCAATATAACCTTATCACAACTGCTTCTCTTACTGTTACTGTTGTTGTTGTGGAATAATGCATCTTGTTTACTGCCTCCTCAAGATGCCGTCTCCCTAATGGCATTCAAGTCCAAAGCCGATCTCAATAACCGTCTCAACTTCGCCAACACCAGCGCCGCCGCACAACACCGCTTCTGCCACTGGCAAGGAGTCCAATGCGCCGCAAACAGAGTGGTCCGCCTCGTCATCCAGGACTTGGATCTCGGTGGCGTCTTCGCTCCGGACACACTGTCGAAGCTGGACCAGCTCCGGGTGCTGAGCCTTCACAATAACTCCCTAACCGGACCCATACCGGACCTCTCAGGTCTCACAAACCTCAAGAGTCTCTTTCTCCACAACAACCGTTTCAACGGTTCTCTCCCTCTTTCACTCTTCTCCCTCCACAGGCTCCGAACCTTGGATTTCTCCCACAACAACCTCTCCGGTCACATTCCAATTGCATTCACCAAACTCGACCGCCTCTACTCCCTTCGCTTGAGTTGGAACCACTTCAACGGTACCGTTCCTCCTTTCAACCAGTCTTCTCTCAAAACCTTTGACGTTTCCTGCAACAACCTCACCGGCGCCGTTCCCCTCACACCTACATTGTTCCGTTTTGATGCTTCCTCTTTCTCTTTCAACCCGGGACTCTGCGGCGAAATCATCCACAAGGAATGCCATCCGAGTACGCCGTTTTTCGGCCCCATAGCGGCGTCTTCGCCTCCGCCAGCAGTGGTTCTCGGCCAGAGCACGGAAGTTCACGGCGTTAATGGCATTTTCCGGCAGCCGTACGAGAAGAAGCGAGACAGGACGGCAGTGATTGTGGGATTCTCCGCGGGAGTGGTTGTTCTCGTGGCATCGTTGGTGTGCTTCGCGGTGGCCGTGAGGAGGCAGAGGAGGAGCAGCGGAGGAGAAGAGAACAAGAAGGAAGGAGCAATCAGGTCAGGGTACATGGGATCGGATGCGGCGGCGACGGCGGAGGCAGCGGCGGCAATGCAGGTGGAGCAAGAAAGAGAGCTGGAGGAGAAGGTGAGGAGGGCACAGGTAGTGGCGAAGAGTGGGAGTTTAGTATTCTGTGCGGGGGAGGCGCAGGTGTACACGCTGGAGCAGCTGATGAAGGGTTCTGCGGAGCTTTTAGGGAGAGGGTGTTTGGGCACGACTTACAAGGCGGTTCTTGATAACCGTCTGATCGTTACGGTTAAGAGGCTTGATGCTGGGAAGATGGGTGCACATGCAACAAAGGAGGTTTTCGAGCGACACATGGAATCAGTGGGTGGCCTTCGCCATCCCAATTTGGTTCCTGTAAGGGCTTATTTTCAGGCTAAGGATGAGAGGCTCGTTATCTACGATTACCAACCCAATGGCAGCCTCTTCTCCCTCATTCACGGTTCTAGATCAAGCAGGGCAAGGCCATTGCACTGGACATCGTGCTTAAAAATAGCAGAAGACGTAGCACAGGGTTTGTCGTACATCCACCAAGCATGGAGATTGGTCCACGGCAATCTCAAATCCTCCAATATTATCCTTGGCCCTGATTTCGAGGCCTGCATCACGGACTATTGCCTCACCCTTCTGGCCAACCCATCAGACTTGCATGAAGATGCTGATTCCGCCGCCTACAGGGCTCCGGAGACTCGCAATCCCAAGCACCATCACCAACCAACACCCAAATCAGACGTTTATTCATATGGGGTTCTGCTCATGGAGCTTCTCACTGGGAAATCTCCCTCTGAGGTACCGTTCTTGGTTCCGAACGATATGTTGAGTTGGGTGAGGTCCATAAGGGATGACAATGGTGGTGATGATAGTAGAATGGACATGCTTCTTCAGGTGGCTACGACTTGTAGCTTGACCTCGCCGGAGCAGAGACCCACCATGTGGCAAGTCTTGAAGATGTTGCAGGAGATCAAGGAGATTGTATTATTGGAGAATAATACTGAATTGGACTTGCGGCAGTAG 1983 0.53 MTNITLSQLLLLLLLLLLWNNASCLLPPQDAVSLMAFKSKADLNNRLNFANTSAAAQHRFCHWQGVQCAANRVVRLVIQDLDLGGVFAPDTLSKLDQLRVLSLHNNSLTGPIPDLSGLTNLKSLFLHNNRFNGSLPLSLFSLHRLRTLDFSHNNLSGHIPIAFTKLDRLYSLRLSWNHFNGTVPPFNQSSLKTFDVSCNNLTGAVPLTPTLFRFDASSFSFNPGLCGEIIHKECHPSTPFFGPIAASSPPPAVVLGQSTEVHGVNGIFRQPYEKKRDRTAVIVGFSAGVVVLVASLVCFAVAVRRQRRSSGGEENKKEGAIRSGYMGSDAAATAEAAAAMQVEQERELEEKVRRAQVVAKSGSLVFCAGEAQVYTLEQLMKGSAELLGRGCLGTTYKAVLDNRLIVTVKRLDAGKMGAHATKEVFERHMESVGGLRHPNLVPVRAYFQAKDERLVIYDYQPNGSLFSLIHGSRSSRARPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNIILGPDFEACITDYCLTLLANPSDLHEDADSAAYRAPETRNPKHHHQPTPKSDVYSYGVLLMELLTGKSPSEVPFLVPNDMLSWVRSIRDDNGGDDSRMDMLLQVATTCSLTSPEQRPTMWQVLKMLQEIKEIVLLENNTELDLRQ 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01355 660 Pfam Leucine rich repeat 119 179 IPR001611 GO:0005515
Arst8g01355 660 Pfam Protein kinase domain 385 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g01355 660 SUPERFAMILY L domain-like 50 226 - -
Arst8g01355 660 Gene3D Ribonuclease Inhibitor 30 139 IPR032675 -
Arst8g01355 660 Gene3D Transferase(Phosphotransferase) domain 1 461 656 - -
Arst8g01355 660 SUPERFAMILY Protein kinase-like (PK-like) 385 642 IPR011009 -
Arst8g01355 660 Gene3D Ribonuclease Inhibitor 140 227 IPR032675 -
Arst8g01355 660 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 13 645 IPR046959 -
Arst8g01355 660 FunFam Nuclear pore complex protein NUP107 28 185 - -
Arst8g01355 660 ProSiteProfiles Leucine-rich repeat profile. 97 119 IPR001611 GO:0005515
Arst8g01355 660 ProSiteProfiles Protein kinase domain profile. 381 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g01355 660 Gene3D Phosphorylase Kinase; domain 1 349 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01355 Arst-Chr8 18385893 18389912 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01355 29 651 Receptor kinase-like Gene Family AT5G43020 59.055 0.0 722
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Arst8g01355 Pkinase 5.4e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01355 - - gmx:100817172 917.531