Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01348 ATGTATGAATCTGGTTCAGAACATATGGTTTTCTTCATATCCTATCGTCAGTTTGATTATTATTGTTCCTTAATTTGGCAAATTAAAGAAGCAATGGCTATCCAAGTCCTGCTGTTGCTCTTAACTTGTTTTGCGCCGGCAGCGGCCAAAGACACACTGTCACAAGGCTCCTCTCTTTCCGTGGAGAAGCCAACCACCGACATCCTGGTCTCCGCCAATGGTGACTTCTCCGCCGGATTCTTCCAAGTCGGCGACAACGCTTTCTGTTTCTCCGTGATGTTCACAAGGTCACAAACACCCACCCCAGTTTGGATGGCCAACCGCGACCAACCCGTCAACGGAAAATCCTCAACTCTCTCTCTCTTGAAATCCGGCAACCTTATTCTCATCGACGCCGGAAGAACCCCCTTCTGGTCCACCACCACATCCTCCTCTTCTGAACTGCACCTCAAGCTCAACAATAAAGGCAACCTCCTTCTCCAAACTTCACAAGGAACCGTCCTTTGGCAAAGCTTCGATTCACCAACGGACACCCTTCTTCCCGGTCAAAAACTAACTGATCAAGCTTTCCTTCTCTCTTCAAGAAGCACAACAAACTTCTCCTCAGGCTTCTACAAGCTCTTCTTCGACACCGACAACGTCCTCAAGTGTCTTTACAAAGGCCCTAACATCTCCAGCGTGTACTGGCCAACCCCCTATAACACTGCAAGTACTAACGGAAGATCCACCTTCAATATTTCAAGAATCGCACTCTTAGATTCTTACGGAGCCTTCTTATCCTCCGATGGCTTCCAATCCAACTCCACCGATTACCTCGCCACACTCCACAGAAAGCTCGTCATGGATCCTGATGGAAACCCGCGTATATACAGCTTCAACCAGAATCGTAAGATGTGGGAGGTAACATGGCAAGCCATTAACGCACCTTGTACCGTTCATGGCCTCTGCGGAGCAAATAGCTTGTGCGCTTATCATCCTGTTAATGGCAGAACTTGCTATTGCATGCAAGGATTCAAGGTTAAGGATCCCAATGACTGGACCCACGGATGCGTCCCTGAGTTTGACGAAGAACAACTCAGTTGCAGTGGAAAAAAGAATGCATCCATAGATTTTGTGATTCTTCCAAGCACGGAGTTTTATGGCTATGAGAGCAAAGTTTACAACGTTGCAAGCTTGATACAATGCCGGAATATATGCACGCAACTTTGCGATAATTGCAAAGGTTTTCAACTCAGTTTCAATAACATTCGAACCTATAATTGTTACCCTAAGACAGTTTGGCTTAACGGAAGAGATTCTCCTGATTTCAGTGGAGACACATATTTGAAATTGCCGAAACAAACTTTATTGTCTTCCAAGAAGCCTCTCAAACATTCACCAATGGAATGTTCTTCTCGTTTGTCTCAACCTTTGGATAGATTCTACCAGAAACCTAGAAGAAACTCCACGTTGAATTTCTTGCTCTGGTTCGCCAGCGCGGTAGGGGCGCTTGAATTGACCGCAATCTTGGCTGTGTGGTTCTTCTTGTTCAGAACCAACAAGCAACCTGATCATGAAGATCAACGGCTACTCCTTTCCGCTACGGGATTCCAGAGATTCAGCTATGCTGAGCTGAAAAGAGCAACAAAAGGATTCAGCCACAGCCATGAGATTGGTCGAGGCTCCGGAGGGGTTGTGTACAAAGGAAAACTAGACGATGATCGTTTTGCTGCCATCAAACTTCTCAGCAGCGACGCGAATCAAGGAGAAGCTGAATTCCTAGCTGAGTTAAGCACCATTGGGATGTTGAACCACATGAATTTGATTGACATGTGGGGTTACTGTGTTGAAGGGAAGCACAGGGTGTTGGTTTATGAGTACATGGAGCATGGTTCGTTGGCAGATTATCTGTCTTCAAACACGCTTGATTGGAAGAAAAGGTTTGATGTTGCAGTTGGAACAGCAAAAGGTCTTGCTTATTTGCACGAGGAGTGCTTGGAGTGGGTGTTGCACTGCGATGTGAAGCCGCAGAACATTCTTCTAGACTCCAACTTCCAACCCAAGGTGGCGGATTTCGGGCTCTCAAAGCTTCTGAATAGAGACGAGCGTGCGGGTTCTGGGTTTTCAAGAATAAGAGGAACGCGTGGGTACATGGCTCCAGAGTGGGTTTACAATCTTCCAATAACTTCCAAGGTGGATGTTTATAGCTACGGGATTGTTGTGTTGGAAATGGTGACTGGGAAGAGCGCTATGGAGACTCATAGTCTTGATTTGAGTAGTCGGGGAATTGAGCAGCGGCGGTTGGTGACGTGGGTGAGTGACGTCATCAACGGTGCTCCCAAGACAGAGTTTTGGGTTGAGGCTATTGCGGATCCTAAATTGGAAGGGGAATATGAGATTTCGCAGGTTGAGGTTTTGGTCAAAGTGGCTTTGCAGTGTGTGCAAGATGACATGAATCAAAGACCCTCCATGAGCCAAGTGGCGGAGATGCTTCAGCCCCATGGAAAAACTATCCTACTTTGTTAG 2505 0.4671 MYESGSEHMVFFISYRQFDYYCSLIWQIKEAMAIQVLLLLLTCFAPAAAKDTLSQGSSLSVEKPTTDILVSANGDFSAGFFQVGDNAFCFSVMFTRSQTPTPVWMANRDQPVNGKSSTLSLLKSGNLILIDAGRTPFWSTTTSSSSELHLKLNNKGNLLLQTSQGTVLWQSFDSPTDTLLPGQKLTDQAFLLSSRSTTNFSSGFYKLFFDTDNVLKCLYKGPNISSVYWPTPYNTASTNGRSTFNISRIALLDSYGAFLSSDGFQSNSTDYLATLHRKLVMDPDGNPRIYSFNQNRKMWEVTWQAINAPCTVHGLCGANSLCAYHPVNGRTCYCMQGFKVKDPNDWTHGCVPEFDEEQLSCSGKKNASIDFVILPSTEFYGYESKVYNVASLIQCRNICTQLCDNCKGFQLSFNNIRTYNCYPKTVWLNGRDSPDFSGDTYLKLPKQTLLSSKKPLKHSPMECSSRLSQPLDRFYQKPRRNSTLNFLLWFASAVGALELTAILAVWFFLFRTNKQPDHEDQRLLLSATGFQRFSYAELKRATKGFSHSHEIGRGSGGVVYKGKLDDDRFAAIKLLSSDANQGEAEFLAELSTIGMLNHMNLIDMWGYCVEGKHRVLVYEYMEHGSLADYLSSNTLDWKKRFDVAVGTAKGLAYLHEECLEWVLHCDVKPQNILLDSNFQPKVADFGLSKLLNRDERAGSGFSRIRGTRGYMAPEWVYNLPITSKVDVYSYGIVVLEMVTGKSAMETHSLDLSSRGIEQRRLVTWVSDVINGAPKTEFWVEAIADPKLEGEYEISQVEVLVKVALQCVQDDMNQRPSMSQVAEMLQPHGKTILLC 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01348 834 Pfam D-mannose binding lectin 101 187 IPR001480 -
Arst8g01348 834 FunFam Serine/threonine-protein kinase 621 830 - -
Arst8g01348 834 ProSiteProfiles Protein kinase domain profile. 545 830 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g01348 834 SMART blect_4 58 175 IPR001480 -
Arst8g01348 834 ProSitePatterns Serine/Threonine protein kinases active-site signature. 662 674 IPR008271 GO:0004672|GO:0006468
Arst8g01348 834 PIRSF SRK 25 832 IPR024171 GO:0004674
Arst8g01348 834 Gene3D Phosphorylase Kinase; domain 1 509 620 - -
Arst8g01348 834 ProSitePatterns Protein kinases ATP-binding region signature. 551 573 IPR017441 GO:0005524
Arst8g01348 834 ProSiteProfiles Bulb-type lectin domain profile. 44 173 IPR001480 -
Arst8g01348 834 Gene3D Transferase(Phosphotransferase) domain 1 621 830 - -
Arst8g01348 834 Gene3D - 176 305 IPR036426 -
Arst8g01348 834 ProSiteProfiles PAN/Apple domain profile. 361 445 IPR003609 -
Arst8g01348 834 SMART serkin_6 545 824 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g01348 834 CDD PAN_AP_plant 358 445 - -
Arst8g01348 834 SUPERFAMILY alpha-D-mannose-specific plant lectins 88 232 IPR036426 -
Arst8g01348 834 Gene3D - 46 174 IPR036426 -
Arst8g01348 834 Pfam Protein kinase domain 546 822 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g01348 834 CDD B_lectin 69 175 IPR001480 -
Arst8g01348 834 PANTHER OS07G0415500 PROTEIN 36 825 - -
Arst8g01348 834 SUPERFAMILY Protein kinase-like (PK-like) 521 824 IPR011009 -
Arst8g01348 834 Pfam S-locus glycoprotein domain 274 341 IPR000858 GO:0048544
Arst8g01348 834 FunFam S-receptor-like serine/threonine-protein kinase 512 620 - -
Arst8g01348 834 CDD STKc_IRAK 551 826 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01348 Arst-Chr8 18235835 18238380 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01348 472 826 Receptor kinase-like Gene Family AT3G58690 35.809 9.10e-65 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Arst8g01348 Pkinase 4.4e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01348 - - aip:107606391 1627.07