Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01346 ATGGAGAGTGGAAAACTGGTTCAATGTTGTGTGGGCCATTGGCTGCGCCCGAGAACTCAAGACTTCAACAATTTAGACCAACGTCACCACTCACCAGATAAACCAAACGACGTTATAGTGTCACCCAAGGGCACCTTTTCTGCTGGCTTCTACGCGATTGGCGAAAACGCTTATTGCTTTGGCGTTTGGTTTTCCCGAAATCCTACTCTTGTATGGATGGCAAATCGTGACGAACCAGTCAACGGAAAGAAATCAAAGCTCTCCCTACTCGCCAATGGTAACCTTGTTCTAGTGGATGCCGATAATTCCCATGTTTGGTCAACAGACACCGTTTCATCGCCGTCTTCTACCGTGCATTTGGTTCTGTATGACACCGGCAACCTTGTTCTAACGGAGGACATGAACAGCACCGTGTTGTGGCAAAGCTTTGATTTCCCCACGGATACTCTTCTTCCTGAGCAAGTGTTCGCCCGATTTACCAAAGTAATCTCTTCGAAAAGCCAGACAAACAAGTCCACTGGTTTGTACACGTTGTTTTTCGACAACGATAACGTTCTTCGTCTTGTTTACAATGGCCCCGAAGTTTCAGGGATCTACTGGCCAGATCCTTGGAATCTGAACTGGGCCAACTTCAGGAGTAGTTACAACAGCAGCAGAGTTGCAGTCTTGGACACTCTTGGCACCTTCATTTCCTCAGATAATTTCACTTTCACCACTTCCGATCACGGTTCCGTCATCCAGCGAAGGTTGACCCTTGATCCCAATGGAAACCTTCGTGTTTATAGCCGTAGCAGTGATCAAGATGACTGGTATGTTTCCTGGCAAGCTTATGCAAGACCATGCAGGATCCATGGCGTTTGTGGGCCCAATAGTTTGTGCACTTACCATACTGATTCTTCCATTAAATGCTCTTGCCTTCCCGGTCATAAGATGAAGTATTCAAATGATTGGTCTTATGGCTGCGAACCCAAATTTTCTCTATCTTGCAAGAACAATGAAAGTGCGTCGTCGTCACAGTTCTTATCTATAAGCAACGTGGAGTTGTATGGCTATGATTATGGACTCATGACAAATTACACATTAGATCAGTGTAAAGAGTTCTGCCTCCAACTATGCGATTGCAAAGGCGTTCAGTACACTTATAACAAGGCCTCTGGTACCAACAATTGTTTTGTCAAGGTTCAGTTGCGGAATGCATATCGCATCCCATATTTTGATGCTGAATTTCTTTTGAAACTGCCAGTCAATAGTACCTATTCTTTTCAAGATGATCAAGTTTCAATCGTTGATAGACACAACAATCTTGATTGTCCTGTGGGTGCAGAAACAATACAACTTGAGAGGATTTATATCAAAGGGCAGGTGAGCAGATATGTTAAGTTCTTGTTATGGTTCGCCGGAGGAGTTGGGATATTTGAAATGCTGTGCATATTTGTGGTTTGGTACTTTTTGGTAAGGTTTAGGGTGCATTCTGGTGCAGATGAACGAGTGTATGACTTAGGCTTTGCAGGGTTTAGGAGATTCAGTTACTCTGAACTGAAACAAGCCACCAAAGGGTTTAGCCAAGAGATTGGAAAGGGTGCATGGGGGATTGTATACAAAGGTGTACTCTCTGATGGAAGAGTGGTGGCCGTGAAGAGACTCATGGAAGCGAATCAAGGAGAAGAGGAGTTCCTTGCTGAAGTGAGAAGCATTGGAAGGCTCAATCACATGAACTTGATTGAGATGTGGGGATACTGTGCTGAAGGGAAACACAGGCTCCTGGTTTATGAGCACATGGAGCATGGTTCTCTTGCCGAGAATCTTAGGACAAATAGATTATTGGATTGGTCCAAAAGGTTTGAGATTGCGTTGGGTACAGCCAAAGGTTTGTCTTATCTTCATGATGAGTGTTTGGATTGGATTTTGCATTGTGATGTAAAGCCACAGAACATTCTTCTTGATTCTAATTTTCAACCAAAGGTAGCTGATTTTGGATTGTCCAAGTTGCTTAAAAGAAGTGACACTAATAAGTACTCTAGCTTTTCCAAGATACGAGGAACAAGAGGATACATGGCTCCTGAGTGGGTTTTGAACCTCCCAATAACCTCCAAGGTTGATGTTTATAGCTATGGAATTGTTGTGTTGGAAATGTTCACTGGAAAGAGCGCAACCAAGAACCTTGGGATTAGTAGTGATGGAGTAGAGAATAATCAACATATGTACCTGGTTGCATGGCTGAGAGAGAAACAAAGTAAGGGATTTCGTTGTGGTTGGGTTAGTGAAATCTTAGACCCCACCATAGAAGGTGATTATGATGAAAATAAGTTGGAAGCTTTGGCTAGAGTTGCTTTGCAATGTGTAGAGGATGAGAGGGACAAAAGACCCACCATGAGCCAAGTGGTAGAGATGCTTCAGAAATCTTTACAATAA 2412 0.4345 MESGKLVQCCVGHWLRPRTQDFNNLDQRHHSPDKPNDVIVSPKGTFSAGFYAIGENAYCFGVWFSRNPTLVWMANRDEPVNGKKSKLSLLANGNLVLVDADNSHVWSTDTVSSPSSTVHLVLYDTGNLVLTEDMNSTVLWQSFDFPTDTLLPEQVFARFTKVISSKSQTNKSTGLYTLFFDNDNVLRLVYNGPEVSGIYWPDPWNLNWANFRSSYNSSRVAVLDTLGTFISSDNFTFTTSDHGSVIQRRLTLDPNGNLRVYSRSSDQDDWYVSWQAYARPCRIHGVCGPNSLCTYHTDSSIKCSCLPGHKMKYSNDWSYGCEPKFSLSCKNNESASSSQFLSISNVELYGYDYGLMTNYTLDQCKEFCLQLCDCKGVQYTYNKASGTNNCFVKVQLRNAYRIPYFDAEFLLKLPVNSTYSFQDDQVSIVDRHNNLDCPVGAETIQLERIYIKGQVSRYVKFLLWFAGGVGIFEMLCIFVVWYFLVRFRVHSGADERVYDLGFAGFRRFSYSELKQATKGFSQEIGKGAWGIVYKGVLSDGRVVAVKRLMEANQGEEEFLAEVRSIGRLNHMNLIEMWGYCAEGKHRLLVYEHMEHGSLAENLRTNRLLDWSKRFEIALGTAKGLSYLHDECLDWILHCDVKPQNILLDSNFQPKVADFGLSKLLKRSDTNKYSSFSKIRGTRGYMAPEWVLNLPITSKVDVYSYGIVVLEMFTGKSATKNLGISSDGVENNQHMYLVAWLREKQSKGFRCGWVSEILDPTIEGDYDENKLEALARVALQCVEDERDKRPTMSQVVEMLQKSLQ 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01346 803 CDD B_lectin 32 146 IPR001480 -
Arst8g01346 803 CDD STKc_IRAK 524 800 - -
Arst8g01346 803 SUPERFAMILY alpha-D-mannose-specific plant lectins 60 203 IPR036426 -
Arst8g01346 803 PANTHER OS07G0415500 PROTEIN 38 800 - -
Arst8g01346 803 Gene3D - 29 143 IPR036426 -
Arst8g01346 803 Gene3D Phosphorylase Kinase; domain 1 491 592 - -
Arst8g01346 803 FunFam S-receptor-like serine/threonine-protein kinase 488 592 - -
Arst8g01346 803 SMART serkin_6 518 802 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g01346 803 SMART blect_4 30 146 IPR001480 -
Arst8g01346 803 Pfam Protein kinase domain 521 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g01346 803 SUPERFAMILY Protein kinase-like (PK-like) 501 798 IPR011009 -
Arst8g01346 803 PIRSF SRK 6 803 IPR024171 GO:0004674
Arst8g01346 803 Pfam PAN-like domain 335 394 IPR003609 -
Arst8g01346 803 Pfam D-mannose binding lectin 69 157 IPR001480 -
Arst8g01346 803 ProSiteProfiles PAN/Apple domain profile. 329 409 IPR003609 -
Arst8g01346 803 ProSitePatterns Serine/Threonine protein kinases active-site signature. 635 647 IPR008271 GO:0004672|GO:0006468
Arst8g01346 803 ProSiteProfiles Bulb-type lectin domain profile. 24 143 IPR001480 -
Arst8g01346 803 ProSitePatterns Protein kinases ATP-binding region signature. 524 546 IPR017441 GO:0005524
Arst8g01346 803 Gene3D Transferase(Phosphotransferase) domain 1 593 803 - -
Arst8g01346 803 FunFam Putative receptor-like protein kinase 593 803 - -
Arst8g01346 803 CDD PAN_AP_plant 325 414 - -
Arst8g01346 803 ProSiteProfiles Protein kinase domain profile. 518 802 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g01346 803 Pfam S-locus glycoprotein domain 210 312 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01346 Arst-Chr8 18183558 18187205 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01346 486 798 Receptor kinase-like Gene Family AT3G58690 40.741 1.68e-67 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Arst8g01346 Pkinase 2.2e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01346 - - gmx:100792388 1042.72