Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01345 ATGGAGAGTGGAAAACTGGTTCAATGTTGTGTGGGCCATTGGCTGCGCCCGAGAACTCAAGACTTCAACAATTTAGACCAACGTCACCACTCACCAGTAGATAAACCAAACGACGTTATAGTGTCACCCAAGGGCACCTTTTCTGCTGGCTTCTACGCGATTGGCGAAAACGCTTATTGCTTTGGCGTTTGGTTTTCCCGAAATCCTACTCTTGTATGGATGGCAAATCGTGACGAACCAGTCAACGGAAAGAAATCAAAGCTCTCCCTACTCGCCAATGGTAACCTTGTTCTAGTGGATGCCGATAATTCCCATGTTTGGTCAACAGACACCGTTTCATCGCCGTCTTCTACCGTGCATTTGGTTCTGTATGACACCGGCAACCTTGTTCTAACGGAGGACATGAACAGCACCGTGTTGTGGCAAAGCTTTGATTTCCCCACGGATACTCTTCTTCCTGAGCAAGTGTTCGCCCGATTTACCAAAGTAATCTCTTCGAAAAGCCAGACAAACAAGTCCACTGGTTTGTACACGTTGTTTTTCGACAACGATAACGTTCTTCGTCTTGTTTACAATGGCCCCGAAGTTTCAGGGATCTACTGGCCAGATCCTTGGAATCTGAACTGGGCCAACTTCAGGAGTAGTTACAACAGCAGCAGAGTTGCAGTCTTGGACACTCTTGGCACCTTCATTTCCTCAGATAATTTCACTTTCACCACTTCCGATCACGGTTCCGTCATCCAGCGAAGGTTGACCCTTGATCCCAATGGAAACCTTCGTGTTTATAGCCGTAGCAGTGATCAAGATGACTGGTATGTTTCCTGGCAAGCTTATGCAAGACCATGCAGGATCCATGGCGTTTGTGGGCCCAATAGTTTGTGCACTTACCATACTGATTCTTCCATTAAATGCTCTTGCCTTCCCGGTCATAAGATGAAGTATTCAAATGATTGGTCTTATGGCTGCGAACCCAAATTTTCTCTATCTTGCAAGAACAATGAAAGTGCGTCGTCGTCACAGTTCTTATCTATAAGCAACGTGGAGTTGTATGGCTATGATTATGGACTCATGACAAATTACACATTAGATCAGTGTAAAGAGTTCTGCCTCCAACTATGCGATTGCAAAGGCGTTCAGTACACTTATAACAAGGCCTCTGGTACCAACAATTGTTTTGTCAAGGTTCAGTTGCGGAATGCATATCGCATCCCATATTTTGATGCTGAATTTCTTTTGAAACTGCCAGTCAATAGTACCTATTCTTTTCAAGATGATCAAGTTTCAATCGTTGATAGACACAACAATCTTGATTGTCCTGTGGGTGCAGAAACAATACAACTTGAGAGGATTTATATCAAAGGGCAGGTGAGCAGATATGTTAAGTTCTTGTTATGGTTCGCCGGAGGAGTTGGGATATTTGAAATGCTGTGCATATTTGTGGTTTGGTACTTTTTGGTAAGGTTTAGGGTGCATTCTGGTGCAGATGAACGAGTGTATGACTTAGGCTTTGCAGGGTTTAGGAGATTCAGTTACTCTGAACTGAAACAAGCCACCAAAGGGTTTAGCCAAGAGATTGGAAAGGGTGCATGGGGGATTGTATACAAAGGTGTACTCTCTGATGGAAGAGTGGTGGCCGTGAAGAGACTCATGGAAGCGAATCAAGGAGAAGAGGAGTTCCTTGCTGAAGTGAGAAGCATTGGAAGGCTCAATCACATGAACTTGATTGAGATGTGGGGATACTGTGCTGAAGGGAAACACAGGCTCCTGGTTTATGAGCACATGGAGCATGGTTCTCTTGCCGAGAATCTTAGGACAAATAGATTATTGGATTGGTCCAAAAGGTTTGAGATTGCGTTGGGTACAGCCAAAGGTTTGTCTTATCTTCATGATGAGTGTTTGGATTGGATTTTGCATTGTGATGTAAAGCCACAGAACATTCTTCTTGATTCTAATTTTCAACCAAAGGTAGCTGATTTTGGATTGTCCAAGTTGCTTAAAAGAAGTGACACTAATAAGTACTCTAGCTTTTCCAAGATACGAGGAACAAGAGGATACATGGCTCCTGAGTGGGTTTTGAACCTCCCAATAACCTCCAAGGTTGATGTTTATAGCTATGGAATTGTTGTGTTGGAAATGTTCACTGGAAAGAGCGCAACCAAGAACCTTGGGATTAGTAGTGATGGAGTAGAGAATAATCAACATATGTACCTGGTTGCATGGCTGAGAGAGAAACAAAGTAAGGGATTTCGTTGTGGTTGGGTTAGTGAAATCTTAGACCCCACCATAGAAGGTGATTATGATGAAAATAAGTTGGAAGCTTTGGCTAGAGTTGCTTTGCAATGTGTAGAGGATGAGAGGGACAAAAGACCCACCATGAGCCAAGTGGTAGAGATGCTTCAGAAATCTTTACAATAA 2415 0.4344 MESGKLVQCCVGHWLRPRTQDFNNLDQRHHSPVDKPNDVIVSPKGTFSAGFYAIGENAYCFGVWFSRNPTLVWMANRDEPVNGKKSKLSLLANGNLVLVDADNSHVWSTDTVSSPSSTVHLVLYDTGNLVLTEDMNSTVLWQSFDFPTDTLLPEQVFARFTKVISSKSQTNKSTGLYTLFFDNDNVLRLVYNGPEVSGIYWPDPWNLNWANFRSSYNSSRVAVLDTLGTFISSDNFTFTTSDHGSVIQRRLTLDPNGNLRVYSRSSDQDDWYVSWQAYARPCRIHGVCGPNSLCTYHTDSSIKCSCLPGHKMKYSNDWSYGCEPKFSLSCKNNESASSSQFLSISNVELYGYDYGLMTNYTLDQCKEFCLQLCDCKGVQYTYNKASGTNNCFVKVQLRNAYRIPYFDAEFLLKLPVNSTYSFQDDQVSIVDRHNNLDCPVGAETIQLERIYIKGQVSRYVKFLLWFAGGVGIFEMLCIFVVWYFLVRFRVHSGADERVYDLGFAGFRRFSYSELKQATKGFSQEIGKGAWGIVYKGVLSDGRVVAVKRLMEANQGEEEFLAEVRSIGRLNHMNLIEMWGYCAEGKHRLLVYEHMEHGSLAENLRTNRLLDWSKRFEIALGTAKGLSYLHDECLDWILHCDVKPQNILLDSNFQPKVADFGLSKLLKRSDTNKYSSFSKIRGTRGYMAPEWVLNLPITSKVDVYSYGIVVLEMFTGKSATKNLGISSDGVENNQHMYLVAWLREKQSKGFRCGWVSEILDPTIEGDYDENKLEALARVALQCVEDERDKRPTMSQVVEMLQKSLQ 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01345 804 SMART serkin_6 519 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g01345 804 FunFam Putative receptor-like protein kinase 594 804 - -
Arst8g01345 804 ProSiteProfiles Bulb-type lectin domain profile. 25 144 IPR001480 -
Arst8g01345 804 Pfam S-locus glycoprotein domain 211 313 IPR000858 GO:0048544
Arst8g01345 804 Pfam PAN-like domain 336 395 IPR003609 -
Arst8g01345 804 ProSitePatterns Serine/Threonine protein kinases active-site signature. 636 648 IPR008271 GO:0004672|GO:0006468
Arst8g01345 804 Gene3D - 31 144 IPR036426 -
Arst8g01345 804 Gene3D Phosphorylase Kinase; domain 1 492 593 - -
Arst8g01345 804 Gene3D Transferase(Phosphotransferase) domain 1 594 804 - -
Arst8g01345 804 CDD PAN_AP_plant 326 415 - -
Arst8g01345 804 ProSiteProfiles Protein kinase domain profile. 519 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g01345 804 PIRSF SRK 6 804 IPR024171 GO:0004674
Arst8g01345 804 Pfam D-mannose binding lectin 70 158 IPR001480 -
Arst8g01345 804 ProSiteProfiles PAN/Apple domain profile. 330 410 IPR003609 -
Arst8g01345 804 FunFam S-receptor-like serine/threonine-protein kinase 489 593 - -
Arst8g01345 804 ProSitePatterns Protein kinases ATP-binding region signature. 525 547 IPR017441 GO:0005524
Arst8g01345 804 SMART blect_4 31 147 IPR001480 -
Arst8g01345 804 CDD STKc_IRAK 525 801 - -
Arst8g01345 804 SUPERFAMILY Protein kinase-like (PK-like) 502 799 IPR011009 -
Arst8g01345 804 PANTHER OS07G0415500 PROTEIN 39 801 - -
Arst8g01345 804 Pfam Protein kinase domain 522 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g01345 804 CDD B_lectin 40 147 IPR001480 -
Arst8g01345 804 SUPERFAMILY alpha-D-mannose-specific plant lectins 61 204 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01345 Arst-Chr8 18183558 18187205 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01345 487 799 Receptor kinase-like Gene Family AT3G58690 40.741 1.64e-67 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Arst8g01345 Pkinase 2.2e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01345 - - gmx:100792388 1043.49