Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01343 ATGCAACTGATGATGATCACTTATGACACCTGCATAAATTTGTTCTGTATATATATCAATCTTGGTGCTTCAATGTTGATCAGCCCAATTAAACACACTAACCAGCGTCCAATGGCTATCATCAATATATCAACATTAATATTTTTTCTCCTTTGTTTAGTATTGTCGATAAAGCTTTCATGTTCAACAAGAAACCATAGCATTCTAATCCAAGGTTCATCAATGTCAGTAGATAAACCAAACGACGTTATAGTGTCACCCAAGGGCACCTTTTCTGCTGGCTTCTACGCGATTGGCGAAAACGCTTATTGCTTTGGCGTTTGGTTTTCCCGAAATCCTACTCTTGTATGGATGGCAAATCGTGACGAACCAGTCAACGGAAAGAAATCAAAGCTCTCCCTACTCGCCAATGGTAACCTTGTTCTAGTGGATGCCGATAATTCCCATGTTTGGTCAACAGACACCGTTTCATCGCCGTCTTCTACCGTGCATTTGGTTCTGTATGACACCGGCAACCTTGTTCTAACGGAGGACATGAACAGCACCGTGTTGTGGCAAAGCTTTGATTTCCCCACGGATACTCTTCTTCCTGAGCAAGTGTTCGCCCGATTTACCAAAGTAATCTCTTCGAAAAGCCAGACAAACAAGTCCACTGGTTTGTACACGTTGTTTTTCGACAACGATAACGTTCTTCGTCTTGTTTACAATGGCCCCGAAGTTTCAGGGATCTACTGGCCAGATCCTTGGAATCTGAACTGGGCCAACTTCAGGAGTAGTTACAACAGCAGCAGAGTTGCAGTCTTGGACACTCTTGGCACCTTCATTTCCTCAGATAATTTCACTTTCACCACTTCCGATCACGGTTCCGTCATCCAGCGAAGGTTGACCCTTGATCCCAATGGAAACCTTCGTGTTTATAGCCGTAGCAGTGATCAAGATGACTGGTATGTTTCCTGGCAAGCTTATGCAAGACCATGCAGGATCCATGGCGTTTGTGGGCCCAATAGTTTGTGCACTTACCATACTGATTCTTCCATTAAATGCTCTTGCCTTCCCGGTCATAAGATGAAGTATTCAAATGATTGGTCTTATGGCTGCGAACCCAAATTTTCTCTATCTTGCAAGAACAATGAAAGTGCGTCGTCGTCACAGTTCTTATCTATAAGCAACGTGGAGTTGTATGGCTATGATTATGGACTCATGACAAATTACACATTAGATCAGTGTAAAGAGTTCTGCCTCCAACTATGCGATTGCAAAGGCGTTCAGTACACTTATAACAAGGCCTCTGGTACCAACAATTGTTTTGTCAAGGTTCAGTTGCGGAATGCATATCGCATCCCATATTTTGATGCTGAATTTCTTTTGAAACTGCCAGTCAATAGTACCTATTCTTTTCAAGATGATCAAGTTTCAATCGTTGATAGACACAACAATCTTGATTGTCCTGTGGGTGCAGAAACAATACAACTTGAGAGGATTTATATCAAAGGGCAGGTGAGCAGATATGTTAAGTTCTTGTTATGGTTCGCCGGAGGAGTTGGGATATTTGAAATGCTGTGCATATTTGTGGTTTGGTACTTTTTGGTAAGGTTTAGGGTGCATTCTGGTGCAGATGAACGAGTGTATGACTTAGGCTTTGCAGGGTTTAGGAGATTCAGTTACTCTGAACTGAAACAAGCCACCAAAGGGTTTAGCCAAGAGATTGGAAAGGGTGCATGGGGGATTGTATACAAAGGTGTACTCTCTGATGGAAGAGTGGTGGCCGTGAAGAGACTCATGGAAGCGAATCAAGGAGAAGAGGAGTTCCTTGCTGAAGTGAGAAGCATTGGAAGGCTCAATCACATGAACTTGATTGAGATGTGGGGATACTGTGCTGAAGGGAAACACAGGCTCCTGGTTTATGAGCACATGGAGCATGGTTCTCTTGCCGAGAATCTTAGGACAAATAGATTATTGGATTGGTCCAAAAGGTTTGAGATTGCGTTGGGTACAGCCAAAGGTTTGTCTTATCTTCATGATGAGTGTTTGGATTGGATTTTGCATTGTGATGTAAAGCCACAGAACATTCTTCTTGATTCTAATTTTCAACCAAAGGTAGCTGATTTTGGATTGTCCAAGTTGCTTAAAAGAAGTGACACTAATAAGTACTCTAGCTTTTCCAAGATACGAGGAACAAGAGGATACATGGCTCCTGAGTGGGTTTTGAACCTCCCAATAACCTCCAAGGTTGATGTTTATAGCTATGGAATTGTTGTGTTGGAAATGTTCACTGGAAAGAGCGCAACCAAGAACCTTGGGATTAGTAGTGATGGAGTAGAGAATAATCAACATATGTACCTGGTTGCATGGCTGAGAGAGAAACAAAGTAAGGGATTTCGTTGTGGTTGGGTTAGTGAAATCTTAGACCCCACCATAGAAGGTGATTATGATGAAAATAAGTTGGAAGCTTTGGCTAGAGTTGCTTTGCAATGTGTAGAGGATGAGAGGGACAAAAGACCCACCATGAGCCAAGTGGTAGAGATGCTTCAGAAATCTTTACAATAA 2547 0.4232 MQLMMITYDTCINLFCIYINLGASMLISPIKHTNQRPMAIINISTLIFFLLCLVLSIKLSCSTRNHSILIQGSSMSVDKPNDVIVSPKGTFSAGFYAIGENAYCFGVWFSRNPTLVWMANRDEPVNGKKSKLSLLANGNLVLVDADNSHVWSTDTVSSPSSTVHLVLYDTGNLVLTEDMNSTVLWQSFDFPTDTLLPEQVFARFTKVISSKSQTNKSTGLYTLFFDNDNVLRLVYNGPEVSGIYWPDPWNLNWANFRSSYNSSRVAVLDTLGTFISSDNFTFTTSDHGSVIQRRLTLDPNGNLRVYSRSSDQDDWYVSWQAYARPCRIHGVCGPNSLCTYHTDSSIKCSCLPGHKMKYSNDWSYGCEPKFSLSCKNNESASSSQFLSISNVELYGYDYGLMTNYTLDQCKEFCLQLCDCKGVQYTYNKASGTNNCFVKVQLRNAYRIPYFDAEFLLKLPVNSTYSFQDDQVSIVDRHNNLDCPVGAETIQLERIYIKGQVSRYVKFLLWFAGGVGIFEMLCIFVVWYFLVRFRVHSGADERVYDLGFAGFRRFSYSELKQATKGFSQEIGKGAWGIVYKGVLSDGRVVAVKRLMEANQGEEEFLAEVRSIGRLNHMNLIEMWGYCAEGKHRLLVYEHMEHGSLAENLRTNRLLDWSKRFEIALGTAKGLSYLHDECLDWILHCDVKPQNILLDSNFQPKVADFGLSKLLKRSDTNKYSSFSKIRGTRGYMAPEWVLNLPITSKVDVYSYGIVVLEMFTGKSATKNLGISSDGVENNQHMYLVAWLREKQSKGFRCGWVSEILDPTIEGDYDENKLEALARVALQCVEDERDKRPTMSQVVEMLQKSLQ 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01343 848 Pfam Protein kinase domain 566 841 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g01343 848 Pfam D-mannose binding lectin 114 202 IPR001480 -
Arst8g01343 848 Pfam PAN-like domain 380 439 IPR003609 -
Arst8g01343 848 Pfam S-locus glycoprotein domain 255 357 IPR000858 GO:0048544
Arst8g01343 848 ProSiteProfiles Protein kinase domain profile. 563 847 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g01343 848 PIRSF SRK 37 848 IPR024171 GO:0004674
Arst8g01343 848 FunFam Putative receptor-like protein kinase 638 848 - -
Arst8g01343 848 CDD B_lectin 75 191 IPR001480 -
Arst8g01343 848 ProSitePatterns Protein kinases ATP-binding region signature. 569 591 IPR017441 GO:0005524
Arst8g01343 848 ProSiteProfiles PAN/Apple domain profile. 374 454 IPR003609 -
Arst8g01343 848 FunFam S-receptor-like serine/threonine-protein kinase 533 637 - -
Arst8g01343 848 Gene3D Phosphorylase Kinase; domain 1 536 637 - -
Arst8g01343 848 Gene3D Transferase(Phosphotransferase) domain 1 638 848 - -
Arst8g01343 848 SUPERFAMILY alpha-D-mannose-specific plant lectins 105 248 IPR036426 -
Arst8g01343 848 ProSitePatterns Serine/Threonine protein kinases active-site signature. 680 692 IPR008271 GO:0004672|GO:0006468
Arst8g01343 848 Gene3D - 64 188 IPR036426 -
Arst8g01343 848 SMART blect_4 75 191 IPR001480 -
Arst8g01343 848 PANTHER OS07G0415500 PROTEIN 42 845 - -
Arst8g01343 848 CDD STKc_IRAK 569 845 - -
Arst8g01343 848 CDD PAN_AP_plant 370 459 - -
Arst8g01343 848 ProSiteProfiles Bulb-type lectin domain profile. 69 188 IPR001480 -
Arst8g01343 848 SUPERFAMILY Protein kinase-like (PK-like) 546 843 IPR011009 -
Arst8g01343 848 SMART serkin_6 563 847 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01343 Arst-Chr8 18183265 18187205 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01343 531 843 Receptor kinase-like Gene Family AT3G58690 40.741 1.88e-67 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Arst8g01343 Pkinase 2.4e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01343 - - gmx:100792388 1053.12