Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01309 ATGGAAACGGATATTCCGGTGGCCAATTACACTTACATGGGCAGGACTTTCACTCAACTCGCCCTCGGTGACCATTCCTCTTCTGCTTTCAGCGACTGCAACAGCGACAGATCTGGCGAGTTCTCCACCACTTCCTCACAAGCTCGCCGCCTCTTTATTGCCTGCACCGCCGACAACTCCGACGACCTCATCACCCACCTCGTCACCGAACTCCAATCCTCTTCCATCGAAGACCAAAAACAAGCTGCCATGGAGATCAGACTTCTCGCCAAGAACAAGCCCGAAAACCGCCTCAAGATCGCCAAAGCTGGCGCCATCAAACCTTTAATCTCCCTCATTTCATCTCAGGACCTTCAGCTTCAGGAATACGGCGTCACCGCCATTCTCAACCTCTCCCTCTGCGATGACAATAAAGACGCCATCGCTTCTTCCGGAGCGATTAAGCCCCTTGTTCGTGCACTCAAGACGGGTACTCCAGCGGCCAAAGAGAACGCCGCCTGCGCTCTCCTTCGGCTCTCGCAGGTGGAAGAGAACAAGCCGGCGATAGGGAAGTGCGGGGCGATTCCGCCGCTGGTAAGCCTTCTAGAAAGCGGCGGTTTACGAGCCAAAAAGGATGCGTCCACGGCGCTGTACTCGCTGTGCTCGTCAGTAAAGGAGAACAAGATCAGGGCAGTCAAGGCGGGGATCATGAAAGTGCTGGTGGAGCTCATGGCAGACTTCGGTGGGAATATGGTAGACAAGTCAGCTTATGTGGCAAGCGTTTTGGTTTCGGTAATGGAGGCAAGGGCAACTCTGGTGGAGGAAGGAGGGATACCTGTGCTAGTGGAGATGGTGGAGGTTGGGACGCAAAGGCAGAAGGAAATAGCGGCGGTTATTCTGTTACAGGTGTGCCAAGACTGCGTGATTTACCGTACGATGGTGGCGCGCGAAGGTGCGATTCCTCCTCTGGTTGCTCTGTCGCAGAACGGCACCAACCGCGCCAAGCAAAAGGCGGAGACACTGATAGAACTTCTACGGCAACCAAGATCCGGCAACGGCGCTGCTCCTCCTACATCATAA 1059 0.5496 METDIPVANYTYMGRTFTQLALGDHSSSAFSDCNSDRSGEFSTTSSQARRLFIACTADNSDDLITHLVTELQSSSIEDQKQAAMEIRLLAKNKPENRLKIAKAGAIKPLISLISSQDLQLQEYGVTAILNLSLCDDNKDAIASSGAIKPLVRALKTGTPAAKENAACALLRLSQVEENKPAIGKCGAIPPLVSLLESGGLRAKKDASTALYSLCSSVKENKIRAVKAGIMKVLVELMADFGGNMVDKSAYVASVLVSVMEARATLVEEGGIPVLVEMVEVGTQRQKEIAAVILLQVCQDCVIYRTMVAREGAIPPLVALSQNGTNRAKQKAETLIELLRQPRSGNGAAPPTS 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01309 352 SUPERFAMILY ARM repeat 60 335 IPR016024 -
Arst8g01309 352 SMART arm_5 93 133 IPR000225 GO:0005515
Arst8g01309 352 SMART arm_5 257 298 IPR000225 GO:0005515
Arst8g01309 352 SMART arm_5 134 174 IPR000225 GO:0005515
Arst8g01309 352 SMART arm_5 175 215 IPR000225 GO:0005515
Arst8g01309 352 SMART arm_5 300 340 IPR000225 GO:0005515
Arst8g01309 352 Pfam Armadillo/beta-catenin-like repeat 94 132 IPR000225 GO:0005515
Arst8g01309 352 Pfam Armadillo/beta-catenin-like repeat 177 215 IPR000225 GO:0005515
Arst8g01309 352 Pfam Armadillo/beta-catenin-like repeat 135 173 IPR000225 GO:0005515
Arst8g01309 352 Gene3D - 177 246 IPR011989 -
Arst8g01309 352 Gene3D - 42 176 IPR011989 -
Arst8g01309 352 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 104 146 IPR000225 GO:0005515
Arst8g01309 352 Gene3D - 247 339 IPR011989 -
Arst8g01309 352 PANTHER U BOX DOMAIN-CONTAINING 63 339 - -
Arst8g01309 352 FunFam RING-type E3 ubiquitin transferase 53 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01309 Arst-Chr8 17727980 17730063 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01309 64 345 U-box Gene Family AT2G23140 50.000 8.03e-81 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01309 - - gmx:100797550 528.865