Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01306 ATGAAGAACAGAACCAGAAAAATGGACGATCTGTCTTCGTGCAACCTTCTTTGTGAAGAAGAAGAAACATTTTTGGAATTGGAAAGAGATGAAGAATACTCTGCCTTTCAATCAGGAATGGATCATCAAGGTGTTTCAGAGAATGAGGATTTGGGGGTTCTGCTTGAGAGAGAGATCCGTATTGGGTTCCGAAAAGATGAGACTTTTGTGTTTGAGGATTGGATGAAACGTTCCCGCACAGATGCAATCAATTGGATTCTCAAAACAAGAGCAACATTGGGATTTCGCTTTCAAACGGCTTATTTGTCTGTCACATATTTCGATCGGTTCCTTTCCAAGCGGTCCATTGATAGTGAAAAGGAGTGGGCAATCCGGTTACTATCAATTGCATGCCTTTCTTTGGCTTCAAAGATGGAAGAATGCAGTGTGCCTGAGTTATCAGTGTTTCAGTCAAAAGATTACTGCTTTGAGAGCAAAGTGATTAGGAGAATGGAGATTTTGGTGCTAACCACATTGGATTGGAATATGAGCATTATAACCCCCTATGATTTCCTTCCTTATTTCATCACAAAGTTCTGCAATCAACCCCCACCAACTACCACTTTTTCCAAGACCATGCAACTCATCTTCACCACAATCAAAGAGGTGAGCATAATGGATCACAAACCATCTGTTGTTGCAGCTGCAGCTACTTTGGTGTCATTGGATCAGCAACTAACCATAGAAGCTGTAGAGTTGAAGATTAGTTCAATTCCTCAACATAGGTTTCTTGATCCTAAAGATGTATTTTCCTGCTACAATCTAATTCAAAGATTACAAGAGGAGAATAATACAAGAAGAGACAATAACGTTTTGCATACGCCTAGTCCTTCAACAATTGACATGATAGAGAGCTCTCTAATTACTTCTTCTGCTGCTGTCACAAAGAGGAGAAGACTCTCATTTAATGATGATCAAAGTTCTGAAGGGAAGGGACTTGACTAG 984 0.4004 MKNRTRKMDDLSSCNLLCEEEETFLELERDEEYSAFQSGMDHQGVSENEDLGVLLEREIRIGFRKDETFVFEDWMKRSRTDAINWILKTRATLGFRFQTAYLSVTYFDRFLSKRSIDSEKEWAIRLLSIACLSLASKMEECSVPELSVFQSKDYCFESKVIRRMEILVLTTLDWNMSIITPYDFLPYFITKFCNQPPPTTTFSKTMQLIFTTIKEVSIMDHKPSVVAAAATLVSLDQQLTIEAVELKISSIPQHRFLDPKDVFSCYNLIQRLQEENNTRRDNNVLHTPSPSTIDMIESSLITSSAAVTKRRRLSFNDDQSSEGKGLD 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01306 327 CDD CYCLIN_AtCycD-like_rpt2 179 269 - -
Arst8g01306 327 FunFam Cyclin-D5-1 74 177 - -
Arst8g01306 327 Pfam Cyclin, C-terminal domain 179 292 IPR004367 -
Arst8g01306 327 Gene3D - 178 240 - -
Arst8g01306 327 Gene3D - 72 177 - -
Arst8g01306 327 PANTHER CYCLINS 47 271 IPR039361 -
Arst8g01306 327 ProSitePatterns Cyclins signature. 79 110 IPR006671 -
Arst8g01306 327 SUPERFAMILY Cyclin-like 48 176 IPR036915 -
Arst8g01306 327 SUPERFAMILY Cyclin-like 162 273 IPR036915 -
Arst8g01306 327 SMART Cyclin_C_2 179 304 IPR004367 -
Arst8g01306 327 Pfam Cyclin, N-terminal domain 76 177 IPR006671 -
Arst8g01306 327 SMART cyclin_7 84 170 IPR013763 -
Arst8g01306 327 CDD CYCLIN_AtCycD-like_rpt1 79 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01306 Arst-Chr8 17677484 17679565 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01306 78 277 Core Cell Cycle Gene Families AT1G70210 39.234 6.73e-41 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01306 K18811 - gmx:100798728 400.593