Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01281 ATGGAGGACGCATTTGCCAGATCTATTCCCGAGGTCCTTGATCACTTTGGAGTCGACCCAACTAAAGGTCTATCAGATACCCAGGTAGTTCAACATGGTCGATTGTATGGTATAAACGTGCTGCCTGAAGATAAAAGAGCTCCTTTTTGGAAATTGGTTTTGAAGCAATTTGATGATTTGCTTGTGAAGATACTTATAGCAGCTGCAGTGATATCATTTATTCTGGCTTTAGTTAATGGAGAAACGGGCTTAATGGCATTTCTGGAGCCTTCTGTTATTCTATTGATATTAGCTGCAAATGCAGCTGTGGGGGTGATTACGGAAACAAATGCTGAAAAAGCTCTCGAGGAGCTGCGTGCCTATCAAGCTGATGTGGCAACTGTTCTGCGAAATGGTTGTTTTTCTATACTTCCAGCCACTGAACTTGTTCCTGGTGATATTGTGGAAGTTTCTGTTAATTTTATTTTTTAAAAAATTATCACAGGTGAGAGCAGCTCGGTGGAGAAAGAGCTTAAAACAACCACAACAACAAATGCTGTATACCAAGACAAGACAAATATTTTGTTCTCGGGAACAGTTATGGTTGCTGGTAGGGCAAGAGCTGTTGTGGTGGGAGTTGGTCCTAACACTGCCATGGGCAACATTCGTGATTCAATGATGCACACAGAGGATGAGGCGACACCATTGAAAAAGAAGCTGGATGAGTTTGGTACCTTTTTGGCGAAGGTTATTGCAGGGATTTGCGTATTGGTGTGGATTGTAAATATTGGTCATTTTCGTGACCCTGCTCATGGTGGTTTCTTGCGTGGTGCTATTCATTATTTTAAGGTTTGTAATAATAGGTGTTTGGCTCTTGGAACAAAGCGTATGGCTAGGTTGAATGCCATCGTTCGGTCTTTGCCTTCTGTTGAAACCTTGGGTTGCACCACTGTAATTTGCAGCGACAAAACTGGAACACTAACTACTAATATGATGTCAGTTGCAAAAGTATGCGTTGTTGAATCTGCACAACGTAGTCCTGCTGCTACTGAATACAGTGTCAGTGGGACAACATATGCACCTGAAGGCATAATTTTTGACAATACAGGGATGCAGATTGACTTTCCAGCTCAATTGCCGTGTCTTCTTCACATAGCAATGTGTTCTGCTCTTTGCAATGAATCAACCCTGCAGTATAATCCTGATAAGGGGAAGTATGAAAAAATTGGTGAGTCAACTGAAGTGGCACTACGTGTCTTTGCAGAAAAGGTTGGTCTTCCTGGTTTTAATTCTATGCCATCAGCCTTGAACATGTTGAGTAACCATGAACGTGCTTCTTATTGTAACCATTATTGGGAGGAACAATTTAGAAAGATGGATGTGCTGGAATTTTCTCGAGATCGGAAAATGATGAGTGTCCTTTGCAGCAGAAACCAATTGAATGTTTTGTTCTCTAAAGGTGCTCCAGAAAGCATAGTTGCTAGATGTACAACAATTCTGTGTAATGACGATGGCTCAATTGTGCCACTTACTGCTGATATTCGAGCAGAGCTGGCTTCAAGGTTCCATAGTTTTGCAGGAAAAGAAACATTGAGGTGCCTAGCTTTGGCTTTGAAATGGATGCCCTCAGGTCAACAGATGTTGTCCTTTGATGATGAGAGAGATCTTACATTTATTGGGTTGGTTGGGATGCTGGATCCACCAAGAGATGAAGTTAGAAATGCCATGCTTTCATGTATGACTGCTGGCATACGTGTTATAGTTGTCACTGGAGATAACAAGTCCACCGCTGAGTCCCTTTGCCGCAAGATAGGCGCTTTTGACCATATGATAGAATTTTCCGAGCGATCTTATACTGCTTCTGAGTTTGAAGAACTTCCACCACTGCAACAAACTCTAGCATTGCAACGTATGGCACTTTTTACCAGAGTTGAGCCTTCTCATAAAAGGATGCTGGTTGAAGCTTTGCAAAATCAGAATGAAGTGGTTGCAATGACGGGTGATGGAGTCAATGATGCACCTGCACTGAAAAAGGCAGATATAGGAATTGCTATGGGTTCTGGAACAGCTGTTGCCAAGAGTGCATCAGACATGGTGCTCGCTGATGACAACTTTGCTTCGATTGTTGCGGCTGTAGCAGAGGGTAGAGCTATATACAACAATACAAAACAGTTTATTAGATACATGATATCATCCAATATTGGTGAAGTAGTCTGTATATTTGTCGCTGCTGTGCTTGGGATACCTGATACTCTCGCTCCTGTCCAGCTGCTTTGGGTCAATTTGGTTACTGATGGACTGCCTGCCACTGCTATTGGCTTCAATAAGCAAGACTCTGATGTGATGAAGGCTAAGCCTCGAAAGGTGAATGAAGCAGTTGTGACAGGTTGGCTCTTCTTCCGTTATCTAGTAATTGGAGCTTATGTTGGCCTTGCAACCGTTGCTGGTTTTATTTGGTGGTTTGTTTATGCTGATAGTGGCCCCAAACTACCATATGTTGAACTGATGAATTTTGACACTTGCCCAACAAGGGAGACAACTTATCCATGCAGTATATTTGATGATCGACATCCATCTACTGTATCAATGACTGTGCTTGTCGTTGTTGAGATGTTCAATGCTTTAAACAACCTTAGTGAAAATCAATCTCTTTTGGTCGTTCCTCCCTGGAGTAACATGTGGCTTGTTGCTTCTATAATCATAACTATGCTTCTTCACATACTAATTTTATATGTTCACCCGCTGTCAGTTCTTTTCTCTGTAACACCATTATCCTGGGATGACTGGATGGTTGTCTTTTATCTTTCAATACCTGTTATAATTATTGATGAAGTATTAAAGTTCTTCTCCAGAAATCCCATTGGTTTGAGGTTCAGATTGTGGTTTAGGAGGTCCGACCTACTTCCAAAAAGAGAAGTGCGTGATAAGTAA 2910 0.4179 MEDAFARSIPEVLDHFGVDPTKGLSDTQVVQHGRLYGINVLPEDKRAPFWKLVLKQFDDLLVKILIAAAVISFILALVNGETGLMAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADVATVLRNGCFSILPATELVPGDIVEVSVNFIFXKIITGESSSVEKELKTTTTTNAVYQDKTNILFSGTVMVAGRARAVVVGVGPNTAMGNIRDSMMHTEDEATPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPAHGGFLRGAIHYFKVCNNRCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKVCVVESAQRSPAATEYSVSGTTYAPEGIIFDNTGMQIDFPAQLPCLLHIAMCSALCNESTLQYNPDKGKYEKIGESTEVALRVFAEKVGLPGFNSMPSALNMLSNHERASYCNHYWEEQFRKMDVLEFSRDRKMMSVLCSRNQLNVLFSKGAPESIVARCTTILCNDDGSIVPLTADIRAELASRFHSFAGKETLRCLALALKWMPSGQQMLSFDDERDLTFIGLVGMLDPPRDEVRNAMLSCMTAGIRVIVVTGDNKSTAESLCRKIGAFDHMIEFSERSYTASEFEELPPLQQTLALQRMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFASIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPVQLLWVNLVTDGLPATAIGFNKQDSDVMKAKPRKVNEAVVTGWLFFRYLVIGAYVGLATVAGFIWWFVYADSGPKLPYVELMNFDTCPTRETTYPCSIFDDRHPSTVSMTVLVVVEMFNALNNLSENQSLLVVPPWSNMWLVASIIITMLLHILILYVHPLSVLFSVTPLSWDDWMVVFYLSIPVIIIDEVLKFFSRNPIGLRFRLWFRRSDLLPKREVRDK 969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01281 969 FunFam Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 656 948 - -
Arst8g01281 969 FunFam Sodium/potassium-transporting ATPase subunit alpha 553 698 - -
Arst8g01281 969 PANTHER CALCIUM-TRANSPORTING ATPASE 8 945 - -
Arst8g01281 969 Gene3D - 323 560 IPR023299 GO:0000166
Arst8g01281 969 SFLD p-type atpase 294 711 IPR044492 -
Arst8g01281 969 Gene3D - 323 560 IPR023299 GO:0000166
Arst8g01281 969 SFLD p-type atpase 294 711 IPR044492 -
Arst8g01281 969 NCBIfam HAD-IC family P-type ATPase 92 340 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Arst8g01281 969 NCBIfam HAD-IC family P-type ATPase 630 744 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Arst8g01281 969 Pfam Cation transporter/ATPase, N-terminus 8 72 IPR004014 -
Arst8g01281 969 NCBIfam calcium-translocating P-type ATPase, SERCA-type 53 816 IPR005782 GO:0005388|GO:0006816|GO:0016020
Arst8g01281 969 ProSitePatterns E1-E2 ATPases phosphorylation site. 315 321 IPR018303 -
Arst8g01281 969 Coils Coil 111 131 - -
Arst8g01281 969 FunFam Calcium-transporting ATPase 323 560 - -
Arst8g01281 969 PRINTS P-type cation-transporting ATPase superfamily signature 682 694 - -
Arst8g01281 969 PRINTS P-type cation-transporting ATPase superfamily signature 313 327 - -
Arst8g01281 969 PRINTS P-type cation-transporting ATPase superfamily signature 553 564 - -
Arst8g01281 969 PRINTS P-type cation-transporting ATPase superfamily signature 156 170 - -
Arst8g01281 969 PRINTS P-type cation-transporting ATPase superfamily signature 659 678 - -
Arst8g01281 969 PRINTS P-type cation-transporting ATPase superfamily signature 575 585 - -
Arst8g01281 969 Pfam Cation transport ATPase (P-type) 383 492 - -
Arst8g01281 969 Pfam Cation transporting ATPase, C-terminus 743 942 IPR006068 -
Arst8g01281 969 Pfam E1-E2 ATPase 122 267 - -
Arst8g01281 969 SUPERFAMILY HAD-like 546 707 IPR036412 -
Arst8g01281 969 SMART Cation_ATPase_N_a_2 3 77 IPR004014 -
Arst8g01281 969 Pfam haloacid dehalogenase-like hydrolase 552 673 - -
Arst8g01281 969 Gene3D - 55 944 - -
Arst8g01281 969 Gene3D - 55 944 - -
Arst8g01281 969 Gene3D - 310 703 IPR023214 -
Arst8g01281 969 Gene3D - 310 703 IPR023214 -
Arst8g01281 969 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 320 557 IPR023299 GO:0000166
Arst8g01281 969 PRINTS H+-transporting ATPase (proton pump) signature 659 675 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Arst8g01281 969 PRINTS H+-transporting ATPase (proton pump) signature 690 715 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Arst8g01281 969 PRINTS H+-transporting ATPase (proton pump) signature 631 647 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Arst8g01281 969 Gene3D - 22 220 - -
Arst8g01281 969 Gene3D - 22 220 - -
Arst8g01281 969 SUPERFAMILY Calcium ATPase, transmembrane domain M 2 944 IPR023298 -
Arst8g01281 969 SUPERFAMILY Calcium ATPase, transduction domain A 124 218 IPR008250 -
Arst8g01281 969 SFLD C1.7: P-type atpase like 294 711 - -
Arst8g01281 969 SFLD C1.7: P-type atpase like 294 711 - -
Arst8g01281 969 FunFam Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 199 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01281 Arst-Chr8 17449329 17464695 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01281 1 969 Primary Pumps ATPases(2) AT1G10130 80.020 0.0 1647
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01281 K05853 - gmx:100783509 1744.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g01281 8 17449329 17464695 Arst8g01281 8 17449329 17464695 ECH