Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01280 ATGGCACAGCTTAGTTTGCGTAATTGTGGTAGTGGCGGCAGAAGCTCCTTGTCTCAAGTTTTAATTGTCTTTGCACTTGTGTTAGAGATCATTTGCTCTTTTCAGCTTTCAACATCTCACTCCATAGTGCAATCCCTTCCTGGATTCCAAGGACCCCTTCCTTTTGTTCTTGAAACTGGGTATGTGGGTGTAGGTGAAACTGAAGAGGAGCAAGATGGTGAAGTCTTCTACTATTTCATTCACTCAGAGAACAACCCCAAAGAGGACCCTCTCCTTCTTTGGCTTACCGGTGGCCCTGGTTGCTCTGCTTTGTCTGGCCTTGTCTTTGAAGTAGGTCCTTTATCATTTATAAACGAGGAATACAATGGGAGCTTGCCAAATCTGGTTTTGAAGCCACAGTCATGGACAAAGGTAAGCAGTGTTATATTCGTAGATTTACCTGTGGGTGCTGGATTCTCTTATGCCAAAACAGAACGTGCTGTTCACCAAAGTACCCGGAAAGTAGTTCAAGATGCTCATCAATTTATTAGGAAGTGGCTGGTTGATCATCCGGAATTTCAATCAAATGAAGTGTACATTGCGGGTGATTCAGTGTCTGGGCTTCCCATTCCAGCAATTGTTGAAGAAATTTCAAATGGAAATGAAGGTGGCGTCAAGCCACATATAAATCTCCAGGGGTACCTGCTGGGGAATCCCTTTACAACATTTATCGAAGATAATTATGCAGTAGCATTCAATCATGGCATGGGACTCATTTCTGATGAATTATACGAGTCACTAAATAGGAACTGTAAAGGAGAGTTCATTAATGTAAACCCCGGAAACAAAGCTTGTGTAAGAGACATGGAATCATACAAGGAGACTATTTCAGGAATTTATGTATGCCACATTTTGGAGCCTAACTGCGAGTTCGCCTTGCGTAACCCATGGAGGAGGAGATCTCTGACTCTAACTGATCAGCTCCACAAGTTTCCGATCCTTGCAGTCCCACCCTTAAGCTGTCGGAGTCATGCATATTTACTATGTACCTATTGGGCCAATTTTGAAGATGTTCGCAAGGCACTAAACGTTCGAAAGGAAAATGGCAGCGCTGTAACTATGACATACTTTACGAGCATGATATTCGAAACAGCGTCCAATATCATGAAAATCTAA 1155 0.4277 MAQLSLRNCGSGGRSSLSQVLIVFALVLEIICSFQLSTSHSIVQSLPGFQGPLPFVLETGYVGVGETEEEQDGEVFYYFIHSENNPKEDPLLLWLTGGPGCSALSGLVFEVGPLSFINEEYNGSLPNLVLKPQSWTKVSSVIFVDLPVGAGFSYAKTERAVHQSTRKVVQDAHQFIRKWLVDHPEFQSNEVYIAGDSVSGLPIPAIVEEISNGNEGGVKPHINLQGYLLGNPFTTFIEDNYAVAFNHGMGLISDELYESLNRNCKGEFINVNPGNKACVRDMESYKETISGIYVCHILEPNCEFALRNPWRRRSLTLTDQLHKFPILAVPPLSCRSHAYLLCTYWANFEDVRKALNVRKENGSAVTMTYFTSMIFETASNIMKI 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01280 384 FunFam Serine carboxypeptidase-like 19 36 308 - -
Arst8g01280 384 Gene3D alpha/beta hydrolase 37 309 IPR029058 -
Arst8g01280 384 PRINTS Carboxypeptidase C serine protease (S10) family signature 131 143 IPR001563 GO:0004185|GO:0006508
Arst8g01280 384 PRINTS Carboxypeptidase C serine protease (S10) family signature 179 204 IPR001563 GO:0004185|GO:0006508
Arst8g01280 384 PRINTS Carboxypeptidase C serine protease (S10) family signature 144 154 IPR001563 GO:0004185|GO:0006508
Arst8g01280 384 SUPERFAMILY alpha/beta-Hydrolases 43 361 IPR029058 -
Arst8g01280 384 Pfam Serine carboxypeptidase 47 361 IPR001563 GO:0004185|GO:0006508
Arst8g01280 384 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 41 361 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01280 Arst-Chr8 17444127 17448707 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01280 37 66 Calmodulin-binding Proteins AT2G22960 63.333 3.32e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01280 K16296 - gmx:100792006 413.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g01280 8 17444127 17448707 Arst8g01280 8 17444127 17448707 ECH