Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01263 ATGACCTTCCAAGACCACGAGCTGGTTCAGTTCATGCTGACCGAAACCGAAATACAGGACCTGTTTTCCCTCATTAACCACCATCCGGGCAGCCCCCCTAGTAGCTCCGGCTCGCAGGGGTCGAACCGGTCGGTTTACTCGAGCGAGGAAAGAAAGCTGAGGCGCATGCAGTCAAACCGGGAATCGGCCCGAAGGTCCCGCGGCAGGAAAAAAAAGCACATGGAGAATCTGACGGTCCAATTGAACCGGTTGAGACTCGAAAATCGAGAACTGAAGAACCAGCTACTCGTGACCATGCACCAGCATCTTCTACTCTCCCTTGAGAATGAGAAGCTATGTTCCGAATCCATTGCACTTAGCGCCACACTTTCCGATCTTTGCCAGATTTTGCGCACCATTCTTCCACAATAA 411 0.5207 MTFQDHELVQFMLTETEIQDLFSLINHHPGSPPSSSGSQGSNRSVYSSEERKLRRMQSNRESARRSRGRKKKHMENLTVQLNRLRLENRELKNQLLVTMHQHLLLSLENEKLCSESIALSATLSDLCQILRTILPQ 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01263 136 CDD bZIP_plant_GBF1 52 102 IPR045314 GO:0003700|GO:0006355
Arst8g01263 136 MobiDBLite consensus disorder prediction 28 46 - -
Arst8g01263 136 SMART brlzneu 47 111 IPR004827 GO:0003700|GO:0006355
Arst8g01263 136 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 49 95 IPR004827 GO:0003700|GO:0006355
Arst8g01263 136 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 54 69 IPR004827 GO:0003700|GO:0006355
Arst8g01263 136 FunFam BZIP transcription factor 49 101 - -
Arst8g01263 136 PANTHER BZIP TRANSCRIPTION FACTOR 44 29 133 - -
Arst8g01263 136 MobiDBLite consensus disorder prediction 47 63 - -
Arst8g01263 136 Coils Coil 74 101 - -
Arst8g01263 136 Gene3D - 49 104 - -
Arst8g01263 136 MobiDBLite consensus disorder prediction 24 75 - -
Arst8g01263 136 Pfam Basic region leucine zipper 48 95 IPR004827 GO:0003700|GO:0006355
Arst8g01263 136 SUPERFAMILY Leucine zipper domain 51 103 IPR046347 GO:0003700|GO:0006355
Arst8g01263 136 Coils Coil 46 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01263 Arst-Chr8 17256761 17257171 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01263 13 130 bZIP Transcription Factor Family AT3G49760 36.800 9.65e-19 75.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Arst8g01263 bZIP_2 1e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01263 - - gmx:102661984 159.073