Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01248 ATGATGATGGCCTTCTCTAATAACAATGACCAAGAACTTGGACTTGGTCTTGGTCTTGGTCTTGTTCATGGTGAAAACTGCAGGCAGAAGAAGGAGAAAGAGGAAGAGAATCCATGCAGCAATATTAAGGCATACCCATCTCTTACTTTAGGACCAGAACAGGATTCTAGATCTTCTCAAAGCGCAGTTGTTTCTTCATTTTCCAACTCATCGTCTAGCATCAAGAGGGAGAGAGATCAAGAATTCTTTCTGGACTTATACGAAGAAGAAAACAAGAAGAATAATAATAAGAATGGTAACCCCAGAAAGAAACTTAGGCTCACCAAACAACAGTCTGCACTCTTAGAGGATAGCTTCATACACCACTCTACTCTCAATCCGAAGCAAAAGCAAGAGTTGGCAAAGAAGCTCAATCTGAGAGCGAGGCAGTGA 432 0.4144 MMMAFSNNNDQELGLGLGLGLVHGENCRQKKEKEEENPCSNIKAYPSLTLGPEQDSRSSQSAVVSSFSNSSSSIKRERDQEFFLDLYEEENKKNNNKNGNPRKKLRLTKQQSALLEDSFIHHSTLNPKQKQELAKKLNLRARQ 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01248 143 Gene3D - 93 143 - -
Arst8g01248 143 MobiDBLite consensus disorder prediction 26 76 - -
Arst8g01248 143 ProSiteProfiles 'Homeobox' domain profile. 98 143 IPR001356 GO:0003677
Arst8g01248 143 SUPERFAMILY Homeodomain-like 99 143 IPR009057 -
Arst8g01248 143 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 14 143 - -
Arst8g01248 143 MobiDBLite consensus disorder prediction 120 143 - -
Arst8g01248 143 MobiDBLite consensus disorder prediction 51 73 - -
Arst8g01248 143 CDD homeodomain 101 143 IPR001356 GO:0003677
Arst8g01248 143 Pfam Homeodomain 102 143 IPR001356 GO:0003677
Arst8g01248 143 MobiDBLite consensus disorder prediction 90 109 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01248 44 143 Homeobox Transcription Factor Family AT5G06710 48.544 1.14e-19 80.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Arst8g01248 Homeodomain 6.6e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01248 K09338 - gmx:100790927 105.916