Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01247 ATGGAGGAATACACTAATAATAGCAACAATAATCAAAGCCCAAGTTCAAGTTCAAGGGCAAGTTTCTTGTACTCTTCCTTTGGTGTTGGTGCTGCTACTTCTTCAAGCATACCCCATCACCTTCCAATTAACACCTTTCATCTTCTTCATCATCATCAATCTGAAGCTGCTGCTGGATCCGATCACTGCTTTCAATCCCATCAAGTACCATCCGTCAAAACCGAACCCAGAAACTCCTCGCAGCAGATTTTCAACTATCCTCTCATGAGACCCAATGATCTTCATCATTCGAGCGACCAAGGAGGAACCCAAAACTCCAACGATGATGTTGAAGCCATCAAAGCCAAAATCATCGCCCATCCTCACTACTCTAATCTCTTACAAGCCTACATGGATTGCCAAAAGGTAGGAGCTCCGCCGGAAGTGGTGGCGCGTTTAAGCGCGGCTCGGCAGGAATTCGAGGCACGGCAGCGCTCTATGGTTGGTTCCACCAGGGAAGCTTGCGGCAAGGACCCTGAACTTGACCAATTCATGGAGGCATACTATGATATGCTTGTGAAGTACCGAGAGGAACTTTCAAGGCCTATACAAGAGGCTATGGACTTCATGCGCAGGATTGAAACTCAGCTTAATATGCTTTCCAATGGACCCCTTCGCATCTTCTCTGATGATAAATGTGAAGGAGTGGGTATTGATCCTCGGGCAGAAGACCGTGAACTGAAGAACCACTTGCTTAGAAAGTACAGCGGCTACTTAAGCAGCCTGAAGCAAGAACTGTCAAAGAAGAAGAAGAAAGGAAAACTCCCTAAAGATGCCAGGCAAAAGCTACTTACTTGGTGGGAGCTACATTATAAATGGCCTTATCCTTCGGAATCAGAGAAGGTAGCATTGGCAGAATCAACAGGACTGGATCAGAAGCAAATAAACAACTGGTTCATAAATCAAAGGAAGAGACACTGGAAACCATCTGAAGACATGCAATTCATGGTCATGGATGGACTCCATCCGCATAATAATCATCAGAACGCATCTCCTCTCTACATGGATTCCCATTATGTTATGCCTGATGGACATTACCGCTTACCACCATAA 1092 0.4542 MEEYTNNSNNNQSPSSSSRASFLYSSFGVGAATSSSIPHHLPINTFHLLHHHQSEAAAGSDHCFQSHQVPSVKTEPRNSSQQIFNYPLMRPNDLHHSSDQGGTQNSNDDVEAIKAKIIAHPHYSNLLQAYMDCQKVGAPPEVVARLSAARQEFEARQRSMVGSTREACGKDPELDQFMEAYYDMLVKYREELSRPIQEAMDFMRRIETQLNMLSNGPLRIFSDDKCEGVGIDPRAEDRELKNHLLRKYSGYLSSLKQELSKKKKKGKLPKDARQKLLTWWELHYKWPYPSESEKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQFMVMDGLHPHNNHQNASPLYMDSHYVMPDGHYRLPP 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01247 363 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 68 329 - -
Arst8g01247 363 SMART HOX_1 261 326 IPR001356 GO:0003677
Arst8g01247 363 ProSiteProfiles ELK domain profile. 239 259 IPR005539 GO:0003677
Arst8g01247 363 MobiDBLite consensus disorder prediction 59 79 - -
Arst8g01247 363 CDD homeodomain 271 323 IPR001356 GO:0003677
Arst8g01247 363 Pfam KNOX1 domain 112 154 IPR005540 GO:0003677|GO:0005634
Arst8g01247 363 Pfam Homeobox KN domain 279 318 IPR008422 GO:0003677|GO:0006355
Arst8g01247 363 Gene3D - 264 326 - -
Arst8g01247 363 ProSitePatterns 'Homeobox' domain signature. 297 320 IPR017970 GO:0000981|GO:0006355
Arst8g01247 363 SMART ELK_2 239 260 IPR005539 GO:0003677
Arst8g01247 363 SMART ELK_2 173 193 IPR005539 GO:0003677
Arst8g01247 363 SMART KNOX1_2 111 155 IPR005540 GO:0003677|GO:0005634
Arst8g01247 363 Pfam KNOX2 domain 169 213 IPR005541 GO:0003677|GO:0005634
Arst8g01247 363 FunFam Homeobox protein knotted-1-like 2 264 326 - -
Arst8g01247 363 SMART KNOX2_2 164 215 IPR005541 GO:0003677|GO:0005634
Arst8g01247 363 Pfam ELK domain 239 260 IPR005539 GO:0003677
Arst8g01247 363 SUPERFAMILY Homeodomain-like 260 335 IPR009057 -
Arst8g01247 363 ProSiteProfiles 'Homeobox' domain profile. 259 322 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01247 Arst-Chr8 16908714 16912765 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01247 48 363 Homeobox Transcription Factor Family AT4G08150 64.451 9.25e-132 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-KNOX Arst8g01247 KNOX2 9.3e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01247 - - gmx:100807602 474.937