Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01220 ATGGGGAGAAATAGGATGAAGAATCTGCTTAGGAAGCTGCACATCGGTGGTGGAGACGGCGGCGATGACGGTGACGGTGACGGTGGCGCTTCTCCTACTATGAACGAACTACCGAGTCGCAATCTGAGTGTTGCAGAGCATGAGCGTGAGCATGAGTTTCAATTTCAGATGAGAATGGCGTTGGCCATCAGTGCTTCCCATCCAATTCCAAACAATGACGCTGACTCCGATCAGATCGATGCCGCCAAGCAGATGAGCTTAGGTTCTGAGTCTTCCCTCACACAGTTCCAATCCCTTCGCTATTGGAATTATAGTGTGATAGGTTATGAGGAGAAAGTGATGGATGAGTTTTATGATGTTTATGGAATCTCTTCAAATATCATTCGTCGAGGAAAGATGCCCTTATTGGTGGATCTGCAGGCTAAAACCACCTCACAAAATGGTGATCGTGAAGTCATCTTGGTGAACCGCTTGGTTGATCTTGAGCTGCAGCGGCTTGAGGAAAAGGCCTGTGCCTTATTCAATGACTGTCCTATTTCTGAAAAAGGACTGATTTTAAGTGGCTTGCTGCAGAGACTTGCTGATATTGTTGTTACCAGAATGGGTGGCACAGTTGGTAGTGCAGATAAAATGATAGAAAGGTGGGCTAGGAGGAGTCATGAGTTAAGAGATTCTTCAAGAACCATTGTTCTTCCTCTTGGCTCTCTTGATGTTGGACTGTCGCGTCACCGAGCCCTGCTTTTTAAGGTACTTGCTGACAAGATTAATATTCCTTGCATGCTGGTCAAAGGGAGCTATTACACTGGAACTGATGATGGAGCATTGAATTTGATAAAAGCTGATGATGGAAGTGAATACATCATTGATATGATGGGTGCACCTGGGGTTCGAACACATTTGATTGATACTAGAACTCAAGTCTTGGGTAGCTCACCTGATCAGTGCAGCAAAAAAACAAAAGCAGTCAGGTCCCAGTCAGAAAAACCATTAAATGTGGGTGGTCAAACAAAACTAGTTGATAATATCCATGTTGGAATGAATGAAAGAGAGAGGTTTGGACATAATTTGGGAAATCTTTTAGAGTCACTGCATAAATCATGTGAATTCTTATCACATAGAGAAACATCACCTGCAGAAAAGATTCGCGTAAACAATGTATCCAAGTATGTCCTCAGTGCAGCAAAGAACCCGGAATTCGCACAAAAACTACACGCAGTTTTGCTAGAGAGTGGAGCCCTCCCCCCACATGATCTCTTTTCAGTTGTAAATCCACAAGATATGGGTGAAGATAAAACATGTGAAGAATTTGTCAGGGATATCGTTCAAGATGATCCAACTAGGTTGTCATTAAGCTACAACAAATCTCTCATACCCTATCAAATGAAGCGCACTGCCCATGATACTAGGTCAGAACAGCAGAAAGAATTTTACGTAGATAGATATGATAATTCCACACAGTGTGATTGTGAATGTGATAATACCGGGAAGGGGTCTGTGATGGTTTGTGACAATAGAGTTGATGGGTTAGAGCAATCTCATTACTTATGTAAAGAGCAATGTCTCCAATCTGATTTGCCCAAGAGAGCTGTTTCTTGTGAAACACGTGATAGGTTTGATGTTTCCCATGATGGGGATGACAAAAATGGTTATAATGAGGTTGGTGTAGCTTTAAATGACGTTGGATTTTGTAAAGAGTCAGCCATTCAGATAAATAAGGCACCCTGTATAGAGTCAGCAAAGTGTATCACATATGATCATAAAAATGACAGAGTTAACCCAGTCTTGGGGGAGAGGAAAGAATGGGAAATTCAATGGGAGGATCTTCGTATTGGTCAACGTATTGGTATCGGTTCGTGTGGTGAGGTTTTCCATGCTGATTGCAACGGTTCGGAAGTTGCTGTGAAGAAGTTTCTAACACAAGATTTTTCTAGTGATGCAGTGGCTCAGTTCAAATCTGAAGTTGAGATCATGTTAAGACTGCGGCATCCCAATATTGTGCTCTTCATGGGAGCTATTACTCGTCCGCCACATCTATCCATCTTGACAGAGTTTCTTCCAAGAGGGAGTTTATATGGTCTATTGCGTAATCCTAAGTTTCAACTTAATGACAAGAGGCGGTTGCGTATGGCTGTTGATGTGGCTAAGGGAATGAACTACTTGCACACAAGTCATCCTCCCATTGTCCATAGAGATTTGAAGTCTCCGAATCTTCTTGTCTCCAAGCATTGGGTTCTTAAGGTCTGTGATTTTGGTCTATCGCGGATGAAGCACCATACATTTTTGTCATCAAAGTCCTATGCTGGAACGGCCGAGTGGATGGCACCAGAAGTCTTAAGAAACGAGCTTGCCAATGAAAAGTGTGATATATATAGTTTTGGAGTAATCTTGTGGGAGTTGGCTACTACAATGATCCCGTGGCAAAGTTTGAACCAAATGCAGGTTGTTGGAGCTGTTGGATTCCAAAACAGGCGCCTTGAAATTCCAGATGATGTTGATCCAGAAGTAGAACAGATAATACGTGATTGTTGGCAAATGGATCCACAGTTACGGCCATCATTCTCCGAGTTATTATCTCGCCTCTGCCAACTTCAACATCTTGTTGTCGTTAAAGGTGTAAAACGAGCTCCACACATCAAATGA 2640 0.4269 MGRNRMKNLLRKLHIGGGDGGDDGDGDGGASPTMNELPSRNLSVAEHEREHEFQFQMRMALAISASHPIPNNDADSDQIDAAKQMSLGSESSLTQFQSLRYWNYSVIGYEEKVMDEFYDVYGISSNIIRRGKMPLLVDLQAKTTSQNGDREVILVNRLVDLELQRLEEKACALFNDCPISEKGLILSGLLQRLADIVVTRMGGTVGSADKMIERWARRSHELRDSSRTIVLPLGSLDVGLSRHRALLFKVLADKINIPCMLVKGSYYTGTDDGALNLIKADDGSEYIIDMMGAPGVRTHLIDTRTQVLGSSPDQCSKKTKAVRSQSEKPLNVGGQTKLVDNIHVGMNERERFGHNLGNLLESLHKSCEFLSHRETSPAEKIRVNNVSKYVLSAAKNPEFAQKLHAVLLESGALPPHDLFSVVNPQDMGEDKTCEEFVRDIVQDDPTRLSLSYNKSLIPYQMKRTAHDTRSEQQKEFYVDRYDNSTQCDCECDNTGKGSVMVCDNRVDGLEQSHYLCKEQCLQSDLPKRAVSCETRDRFDVSHDGDDKNGYNEVGVALNDVGFCKESAIQINKAPCIESAKCITYDHKNDRVNPVLGERKEWEIQWEDLRIGQRIGIGSCGEVFHADCNGSEVAVKKFLTQDFSSDAVAQFKSEVEIMLRLRHPNIVLFMGAITRPPHLSILTEFLPRGSLYGLLRNPKFQLNDKRRLRMAVDVAKGMNYLHTSHPPIVHRDLKSPNLLVSKHWVLKVCDFGLSRMKHHTFLSSKSYAGTAEWMAPEVLRNELANEKCDIYSFGVILWELATTMIPWQSLNQMQVVGAVGFQNRRLEIPDDVDPEVEQIIRDCWQMDPQLRPSFSELLSRLCQLQHLVVVKGVKRAPHIK 879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01220 879 FunFam PAS domain-containing protein tyrosine kinase family protein 686 875 - -
Arst8g01220 879 ProSitePatterns Serine/Threonine protein kinases active-site signature. 727 739 IPR008271 GO:0004672|GO:0006468
Arst8g01220 879 FunFam Serine/threonine-protein kinase isoform 1 598 686 - -
Arst8g01220 879 Pfam Ethylene-responsive protein kinase Le-CTR1 95 295 - -
Arst8g01220 879 Pfam Protein tyrosine and serine/threonine kinase 608 860 IPR001245 GO:0004672|GO:0006468
Arst8g01220 879 Gene3D Transferase(Phosphotransferase) domain 1 687 870 - -
Arst8g01220 879 ProSiteProfiles Protein kinase domain profile. 608 868 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g01220 879 PRINTS Tyrosine kinase catalytic domain signature 787 809 IPR001245 GO:0004672|GO:0006468
Arst8g01220 879 PRINTS Tyrosine kinase catalytic domain signature 721 739 IPR001245 GO:0004672|GO:0006468
Arst8g01220 879 PRINTS Tyrosine kinase catalytic domain signature 768 778 IPR001245 GO:0004672|GO:0006468
Arst8g01220 879 PRINTS Tyrosine kinase catalytic domain signature 831 853 IPR001245 GO:0004672|GO:0006468
Arst8g01220 879 PRINTS Tyrosine kinase catalytic domain signature 682 695 IPR001245 GO:0004672|GO:0006468
Arst8g01220 879 SUPERFAMILY Protein kinase-like (PK-like) 593 860 IPR011009 -
Arst8g01220 879 SMART serkin_6 608 867 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g01220 879 MobiDBLite consensus disorder prediction 13 37 - -
Arst8g01220 879 CDD STKc_MAP3K-like 614 860 - -
Arst8g01220 879 Gene3D Phosphorylase Kinase; domain 1 601 685 - -
Arst8g01220 879 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 151 862 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01220 Arst-Chr8 16661571 16667579 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01220 26 866 MAP Kinase Kinase Kinase AT5G11850 51.416 0.0 829
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Arst8g01220 PK_Tyr_Ser-Thr 3.4e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01220 K04424 - gmx:100779137 983.4