LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst8g01188	ATGTCTTCCACGTTCTATGATGGTAAAACACCCTTAGCACCAAACACGACGTTGGTGGCCGTGGACAAAGATAAGAACAGTTCCTACGCATTTCGTTGGGCGGTTAATCATCTCGACAACCCTCTCGTCCTTGCCGTCCATGTCAAACACAAAGACAACATTTGTAGCCGTAGGTACCCTCTTGATCTCGTTACTGTTTATGAACCCGATGAAGACGATGTAGCCAATGTGTTCGGCAACTTACGTGGACTTTGTAATCGAAAAGCTGTGCAAGTAAAAGAAGCCGTAATCCATGAAAGCGATGTTGTGAGAGGAATTGTGGAATTTGCAAGCAAGAATTTCATACACACTATTGTGGTTGGTGCACCAGCCAACAAGGGTGCTTTGTCAAGGTTTATTTATTTAGGGCACCAAACTGATGTGCCAACAGCATTGCTTAAATCAGCTCCAAATTTCAGTTCTGTATACGTGATTTCCAAATGGAAAATTGTTTCGGTTCGATCTGCAACACGTGCCATCCAACATGCCCTTGCCCCACCCAGAACTCCACCGCGGCTATGGCAATCACCACCCTCTACTCCTACTCCTTCCAGACAACCGCAATCAAAATCACAACCTGTTATGCACCACTATCCACATAGTGAACCAGATATGGGAGGAACAAGAGGAATCTCGTTCCGTGATAAGCCAATGAGTGCAGGAAATTCTCCATTAATGGGTAATATCTTTGAAGACACACCTCCTCATCTAAGACATTTCTCAATGGATGACTGTAGAGAAATATCAATGGATCACAACCAAACTACTAACTTCAGCTTCTCATCAGAATTCTCATCAACCTCAATCTCTTCTTCTACTAGAGATATTGATGCAGAAATTAGAAGATTGAAGCAGGAACTGCAGCAAACTATAGACTTGTACAGCACAGCTTGCAAACAAGCCATCTCAGCCAAGAAAGAGGCTGAAATGATGCGGCATTTGAAAATGGAAGGGGAGAGAAGAGTTGAGGCGATTAGGATGTCTCAAGAGGCAGCTCTTGCCATTGCAGAAAGGGAGAAGGCAAGGGCCACGGCAGCCTGGGAGATGGCGGAGGATGCGAAGAAGAGGGCTGAACTGGAAGCACAGAGAAGAAGGGATGCAGAGTTGAAGGCGGCGAAAGAGGCAGAGGAGAAGGAGATGGCACTAACTGCTTTGGCTCACACCGATATGCGATGCAGGAGATACACCATGGAGGAGATTGAAGCAGCTACAGAGAAGTTCAACCCTTCAAGAAAAATTGGAGAAGGTGGATATGGTTCTGTCTATAAAGGTGATCTTGAAAATACCCCTGTTGCAATTAAGGTCTTAAATCCTGAAGCTGCTCAAGGAAGGAAACAGTTCCAACAAGAGGTTGAGGTACTAAGCTGCATTAGACATCCTAATATGGTTCTGCTCCTTGGTGCTTGTCCTGAATCTGGTTGCTTGGTGTATGAATACATGGACAATGGTACCTTAGAAGATAGATTGTTCCGGAAAGATAATTCACCACCTATGCCATGGAGGCTGCGGTTTAATATAGCTGCTGACATTGCAACTGCTCTCCTTTTCTTACACCAGGCGAAGCCAGAGCCGATTGTTCATCGTGATCTCAAACCAGCTAACATTCTTTTGGACAGGAATTATGTCACCAAAATCGCAGACATCGGTCTGGCAAGATTGGTTCCTCAATCTGTAGTGGACAATGTCACACAATATTACATGACCTCGGCTGCTGGAACATTCTGTTACATTGATCCTGAGTACCAACAAACTGGAATTTTGACCCCAAAATCAGATGTATATTCTTTGGGAGTAGTACTATTGCAAATAATCACAGCCAAACCTGCTATGGGACTTTCTCACCATGTTAGGAGGGCAATTTCAAAGGAAAAATTTGAAGATATGCTTGATCCTATGGTGTTTGATTGGCCAGTTGAGAAGGCTCTAGAATTTGCCAACTTAGCATTGGCCTGTTGTGAGCTCAGAAAGAAGGACAGGCCGAATCTCGCAACCGTTGTGTTGCCGGAACTTAATCGGTTAAGAGAATTTGGAAGATAG	2076	0.4446	MSSTFYDGKTPLAPNTTLVAVDKDKNSSYAFRWAVNHLDNPLVLAVHVKHKDNICSRRYPLDLVTVYEPDEDDVANVFGNLRGLCNRKAVQVKEAVIHESDVVRGIVEFASKNFIHTIVVGAPANKGALSRFIYLGHQTDVPTALLKSAPNFSSVYVISKWKIVSVRSATRAIQHALAPPRTPPRLWQSPPSTPTPSRQPQSKSQPVMHHYPHSEPDMGGTRGISFRDKPMSAGNSPLMGNIFEDTPPHLRHFSMDDCREISMDHNQTTNFSFSSEFSSTSISSSTRDIDAEIRRLKQELQQTIDLYSTACKQAISAKKEAEMMRHLKMEGERRVEAIRMSQEAALAIAEREKARATAAWEMAEDAKKRAELEAQRRRDAELKAAKEAEEKEMALTALAHTDMRCRRYTMEEIEAATEKFNPSRKIGEGGYGSVYKGDLENTPVAIKVLNPEAAQGRKQFQQEVEVLSCIRHPNMVLLLGACPESGCLVYEYMDNGTLEDRLFRKDNSPPMPWRLRFNIAADIATALLFLHQAKPEPIVHRDLKPANILLDRNYVTKIADIGLARLVPQSVVDNVTQYYMTSAAGTFCYIDPEYQQTGILTPKSDVYSLGVVLLQIITAKPAMGLSHHVRRAISKEKFEDMLDPMVFDWPVEKALEFANLALACCELRKKDRPNLATVVLPELNRLREFGR	691

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst8g01188	691	MobiDBLite	consensus disorder prediction	175	231	-	-
	Arst8g01188	691	CDD	STKc_IRAK	426	686	-	-
	Arst8g01188	691	SUPERFAMILY	Protein kinase-like (PK-like)	402	679	IPR011009	-
	Arst8g01188	691	Coils	Coil	363	392	-	-
	Arst8g01188	691	Pfam	Universal stress protein family	18	136	IPR006016	-
	Arst8g01188	691	CDD	STK_N	16	160	-	-
	Arst8g01188	691	Gene3D	Transferase(Phosphotransferase) domain 1	493	689	-	-
	Arst8g01188	691	SUPERFAMILY	Adenine nucleotide alpha hydrolases-like	15	148	-	-
	Arst8g01188	691	Gene3D	HUPs	15	151	IPR014729	-
	Arst8g01188	691	ProSiteProfiles	Protein kinase domain profile.	420	683	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst8g01188	691	Pfam	Protein kinase domain	422	678	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst8g01188	691	PANTHER	OS02G0152300 PROTEIN	18	689	-	-
	Arst8g01188	691	SMART	serkin_6	420	683	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst8g01188	691	ProSitePatterns	Protein kinases ATP-binding region signature.	426	447	IPR017441	GO:0005524
	Arst8g01188	691	FunFam	Adenine nucleotide alpha hydrolase-like domain kinase	392	492	-	-
	Arst8g01188	691	Gene3D	Phosphorylase Kinase; domain 1	388	492	-	-
	Arst8g01188	691	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	538	550	IPR008271	GO:0004672\|GO:0006468
	Arst8g01188	691	MobiDBLite	consensus disorder prediction	183	197	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst8g01188	Arst-Chr8	16355664	16358953	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst8g01188	94	691	Receptor kinase-like Gene Family	AT5G12000	53.736	0.0	634

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-IXb	Arst8g01188		Pkinase	2.5e-42	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst8g01188	-		-	gmx:100798861	793.882