Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01183 ATGGAGGAGATGTCGACTACGGTTGCAGTGCCATTAACAGTAGGTAATTCGGTGTGTGATAAGCCAACCATAGCTACCCACATGGATGTATCTAGACTTAAGCTGATGACTGATACGGGGTTGTTAAGTAATTCTGTAACAGCGGTTTCTACTGAAACGTTTATAGGCTCTAATGAGGATCATAATGGTGGCAATCTTGAGGATGAAGTTGGTAGTGCAACAGTCAAACCATCAAAAAAGGGAAGTGAAGGAGAAATTCCTCTGGATGATATGATATCCCAGAATAAAAGCACTTTGGTTGGTGGTGATGAAGCTTCAACCCCAGAAATCGAGGAGGATGATACCTTATCATTGGAAGGTGATCCAATTATTGATAGCTCCTGTTCTCTTTCAGCAGCCAGTGAGAACAGTAGTATTTGTGGAGATGAGTTCATCAATTCGGAGGCCAATCCGGATTTAGGAACAAGAAGTTCCGTAGACATAGGAAAGAGCATGTGCGCTGTTGATGCTGTTGCCAGGGCTGCTGATTTAGGGGAGTCCAATTATGAGGCAGATATTATGAGTGAACCCCTTGCTGTAACGGTGAGCCTTGAAGAAGAGGCAGTAGTTGGATCTGTCACAAAGCCTACTACAGTTGTTCTTCATCAGCTACCGCTAGAAAAAGCGGTGGCTGGAACAGGTGGTCGAAGTGTTTTTGAATTGGACTGTACCCCGCTTTGGGGATTTATATCTTTGTGTGGAAAAAGACCCGAGATGGAAGACGCATTTGCAACAGTACCCCGATTCATGAAGATTCCTATTGAAATGCTAATTGGTGATAGGGTAATCGATGGACTGAATAAAAGTTTGAGTCAGCAAACAATTCATTTCTTTGGAGTCTATGATGGCCATGGTGGCTCTCAGGTGGCAAACTATTGTCGTGAGCGTATGCATTTGGCGTTGGCAGAGGAAATAGAATTAGTCAAGGAAGGTCTAAGAGTTGGAAGTAGCAAGGATGATTGTCAAGATCAATGGAAAAAAGCTTTCACCAATTGCTTTTTGAAGGTTGATGCTGAAGTTGGGGGAAAAGTTAACAATGAACCTGTTGCACCGGAGACTGTCGGATCAACTGCAGTTGTTGCTGCTATCTGTTCATCTCATATCATTGTTTCAAACTGTGGTGATTCAAGAGCAGTTTTGTGCCGTGGCAAAGAGCCCATGGCTTTATCTGTTGACCATAAACCCAATCGAGATGATGAATACGCAAGAATTGAGGCAGCAGGAGGGAAGGTGATCCAGTGGAATGGTCATCGTGTATTTGGTGTCCTTGCAATGTCACGATCTATCGGTGATAGATATTTGAAGCCATGGATCATTCCGGAGCCGGAAGTTACGTTTCTTCCCCGGACGAAAGACGACGAATGCCTCATTCTGGCGAGTGATGGCCTGTGGGATGTCATGACGAATGAAGAGGTGTGCGACCTAGCTAGGAAGCGAATACTTCTCTGGCACAAGAAAAATGGCCTGACACTGCCACCAGAAAGGGGAGAGGGAGTTGATCCTGCAGCACAAGCGGCTGCAGAGTACCTATCGAGCCGTGCCCTACAGAAGGGAAGCAAAGATAACATCACAGTAATTGTGGTGGACTTAAAAGCTCAAAGAAAATTCAAGAGCAAGACATGA 1662 0.4483 MEEMSTTVAVPLTVGNSVCDKPTIATHMDVSRLKLMTDTGLLSNSVTAVSTETFIGSNEDHNGGNLEDEVGSATVKPSKKGSEGEIPLDDMISQNKSTLVGGDEASTPEIEEDDTLSLEGDPIIDSSCSLSAASENSSICGDEFINSEANPDLGTRSSVDIGKSMCAVDAVARAADLGESNYEADIMSEPLAVTVSLEEEAVVGSVTKPTTVVLHQLPLEKAVAGTGGRSVFELDCTPLWGFISLCGKRPEMEDAFATVPRFMKIPIEMLIGDRVIDGLNKSLSQQTIHFFGVYDGHGGSQVANYCRERMHLALAEEIELVKEGLRVGSSKDDCQDQWKKAFTNCFLKVDAEVGGKVNNEPVAPETVGSTAVVAAICSSHIIVSNCGDSRAVLCRGKEPMALSVDHKPNRDDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVTFLPRTKDDECLILASDGLWDVMTNEEVCDLARKRILLWHKKNGLTLPPERGEGVDPAAQAAAEYLSSRALQKGSKDNITVIVVDLKAQRKFKSKT 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01183 553 CDD PP2Cc 244 543 IPR001932 -
Arst8g01183 553 SMART PP2C_4 229 541 IPR001932 -
Arst8g01183 553 SUPERFAMILY PP2C-like 236 544 IPR036457 -
Arst8g01183 553 Pfam Protein phosphatase 2C 272 536 IPR001932 -
Arst8g01183 553 PANTHER PROTEIN PHOSPHATASE 172 543 IPR015655 GO:0004722|GO:0006470
Arst8g01183 553 FunFam Protein phosphatase 2C 16 227 553 - -
Arst8g01183 553 ProSiteProfiles PPM-type phosphatase domain profile. 239 543 IPR001932 -
Arst8g01183 553 ProSitePatterns PPM-type phosphatase domain signature. 290 298 IPR000222 GO:0043169
Arst8g01183 553 Gene3D - 226 553 IPR036457 -
Arst8g01183 553 MobiDBLite consensus disorder prediction 55 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01183 Arst-Chr8 16304561 16308977 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01183 1 553 PP2C-type Phosphatase Gene Family AT1G17550 49.027 9.88e-168 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01183 K14497 - gmx:100803321 870.152