Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01172 ATGAGTTTGAGAACCGCAGAGGACGATTCTTCGCCGTCGGAGATTCATCTTCCGGCAGAGATAGACTGGCACATGCTCGACAAGTCCAAGTTCTTCTTCCTCGGCGCCGCCTTATTCTCCGGCGTGTCCGCCGCACTTTACCCCATGGTTGTCCTGAAAACTCGGCAGCAAGTTTCTTCTGCAAAATACTCGTGCCTGAACATGTCCTGCGCCATTATGCGCTACGAAGGTTTCAGAGGCTTCTACAAAGGTTTCGGAACTTCTCTGATGGGAACTATCCCAGCTCGCGCACTCTACATGGCGGCACTCGAAGTCACAAAGAGCAATGTCGGAACCGGCCTCATCGAATTGGGTTTCTCCGACACCACAGCCGCCGCCATGTCTAACGCCGCCGCAGGTGTTACCTCTGCCATGGCGGCGCAACTCGTGTGGACCCCAATCGATGTTGTGAGCCAGAGACTCATGGTTCAAGGATGCAGCAGCAGCAATGGCGGTAGCAACAACAGCATGCTGAGAAACCTCAACTCAGAGAATTACAGGAACGGCATTGATGCTTTCAGGAAGATTCTGTGTGCTGATGGAGCGAGAGGGTTCTACAGAGGATTCGGTATTTCGATATTAACATACGCGCCTTCGAATGCAGTTTGGTGGACTTCATATTCAATGGTGCATAGAGTTATATGGAGTGCATTTGGTTGTTACATGTGTGACAATAGCAGCAATAATTTTAGGCCTGATTCAAGGGCCATGCTTGGAGTGCAAGGTTTGAGTGCGGTTGTCGCAAGTGGGGTGTCGGCGATTGTCACAATGCCGCTTGACACCATCAAGACCAGGTTGCAGGTTTTGGATGCGGACGACAATGGAAGAAGGAGGCCGTTGACTTTTGGTCAAACCATAAGGAACTTGGTTAAGGAAGGTGGTCTTTTAGCTTGTTACAGAGGCTTGGCTCCAAGGTGGGCTTCAATGTCCATGTCTGCTACAACCATGATCACTACCTACGAGTTCTTGAAACGCTTGTCTACTAAGTCTCAAGATAAATTTACTTGA 1047 0.4995 MSLRTAEDDSSPSEIHLPAEIDWHMLDKSKFFFLGAALFSGVSAALYPMVVLKTRQQVSSAKYSCLNMSCAIMRYEGFRGFYKGFGTSLMGTIPARALYMAALEVTKSNVGTGLIELGFSDTTAAAMSNAAAGVTSAMAAQLVWTPIDVVSQRLMVQGCSSSNGGSNNSMLRNLNSENYRNGIDAFRKILCADGARGFYRGFGISILTYAPSNAVWWTSYSMVHRVIWSAFGCYMCDNSSNNFRPDSRAMLGVQGLSAVVASGVSAIVTMPLDTIKTRLQVLDADDNGRRRPLTFGQTIRNLVKEGGLLACYRGLAPRWASMSMSATTMITTYEFLKRLSTKSQDKFT 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01172 348 Gene3D Mitochondrial carrier domain 29 347 IPR023395 -
Arst8g01172 348 ProSiteProfiles Solute carrier (Solcar) repeat profile. 124 226 IPR018108 -
Arst8g01172 348 Pfam Mitochondrial carrier protein 126 228 IPR018108 -
Arst8g01172 348 Pfam Mitochondrial carrier protein 40 109 IPR018108 -
Arst8g01172 348 Pfam Mitochondrial carrier protein 255 343 IPR018108 -
Arst8g01172 348 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 10 344 - -
Arst8g01172 348 PRINTS Mitochondrial carrier protein signature 36 49 IPR002067 GO:0055085
Arst8g01172 348 PRINTS Mitochondrial carrier protein signature 199 217 IPR002067 GO:0055085
Arst8g01172 348 PRINTS Mitochondrial carrier protein signature 258 280 IPR002067 GO:0055085
Arst8g01172 348 SUPERFAMILY Mitochondrial carrier 24 336 IPR023395 -
Arst8g01172 348 ProSiteProfiles Solute carrier (Solcar) repeat profile. 249 339 IPR018108 -
Arst8g01172 348 ProSiteProfiles Solute carrier (Solcar) repeat profile. 27 109 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01172 Arst-Chr8 16243768 16244986 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01172 1 347 Chloroplast and Mitochondria Gene Families AT1G72820 63.483 1.80e-160 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01172 K15121 - gmx:100784202 533.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g01172 8 16243768 16244986 Arst8g01172 8 16243768 16244986 ECH