Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01170 ATGATCTCCCTCAATAGATACAGTGTTCTGGAACCAACTACCACGAGGGTGGTGTTGGGAGTGAGAAAGTTGTTAGCAGTGATGTCAAGCACATTCATGAACGGTGGTGGTGGTGTTAGAGACTTGTATGGTGAAGACAGAGCCACGGAGGATCAGCTTATCATCACCCCTCGGTCCTTCTCTGTCTCAAGTGGCTGCACTCTGCTGCGCGATCCGCGCTACAACAAAGGCCTCGCCTTCACTGAGAGAGAAAGAGATGCTCATTACCTGCGAGGCCTTTTGCCACCAGCAGTATTCAATCAAGAACTTCAGGAGAAGAGGTTGATGCATAACCTTCGCCAGTATGAAGTTCCTCTGCATAGGTACATGGCCATGATGGATCTTCAGGAGAGGAATGAGAGGCTGTTTTACAAGATTCTGATCGATAACGTTGAGGAACTGCTTCCTGTTGTTTACACTCCAACTGTGGGAGAAGCCTGCCAGAAATATGGAAGCATTTTCCGTCGTCCGCAGGGTCTATACATCAGTTTGAAAGAGAAAGGCAAGATCCTTGAAGTACTGAAAAACTGGCCAGAGAAGAACATTCAAGTTATTGTTGTCACTGATGGTGAGCGTATATTAGGACTCGGAGATCTTGGCTGCCAGGGAATGGGGATTCCTGTTGGGAAGCTTTCACTCTATACTGCATTGGGAGGGGTTCGCCCTTCATCATGCTTGCCTATAACCATTGATGTTGGCACAAACAATGAGAAGTTGTTGAATGATGAGTTTTACATTGGTCTCAGACAAAAGCGCGCAACTGGGAAGGAATATGCTGAGCTTCTAGATGAGTTCATGCGCGCTGTTAAGCAGAACTATGGGGAGAAAGTTCTTATTCAGTTTGAAGACTTCGCGAATCATAATGCATTCGATCTGCTTGCAAAATACAGTTCATCTCATCTTGTTTTCAATGATGATATTCAGGGTACAGCATCTGTGGTATTAGCAGGATTGCTTGCTTCCTTAAAATTAGTTAGGGGAACCTTAGCTGATCATACCTTCTTATTTTTGGGTGCTGGAGAGGCTGGAACTGGTATTGCAGAGTTGATAGCACTTGAGATATCAAAACAGACAAAAGCTCCAGTGGAAGAAACCCGCCAGAAAATTTGGCTTGTCGACTCCAAGGGTCTTATTGTTAGCTCTCGCCTCGGATCGCTTCAGCACTTCAAAAAGCCTTGGGCACATGAGCATGAACCTGTAAAGGAGCTTGTTGATGCTATCAAGGCAATCAAGCCAACAGTATTGATTGGATCATCTGGAGTAGGGAAGACATTTACCAAAGAAGTGATTGAAGCCATGGCATCATTGAATAAGAAACCACTCATTCTTGCTCTCTCCAATCCAACATCTCAATCTGAGTGCACTGCTGAAGAAGCTTATACATGGAGCAAGGGACAAGCAATCTTTGCCAGTGGTAGCCCATTTGATCCTGTTGAATATGAAGGAAAAGTCTTTGTTCCTGGACAGGCCAACAATGCTTACATATTCCCTGGTTTTGGCTTGGGTTTGATCATCTCCGGTGCAATCCGCGTACGCGATGAGATGCTCTTGGCAGCCTCTGAAGCTTTGGCAGCACAAGTGTCACAGGAGAACTATGATAAAGGACTGATTTACCCTCCATTCTCAAATATCAGAAAGATATCAGCACATATTGCTGCTAACGTGGCAGCCAAGGCATATGAACTTGGTCTTGCTTCTCATCTACCTCGACCTAAGGATCTTGTCAAATATGCAGAAAGTTGCATGTACAGCCCAGGCTACAGAAACTACCGTTGA 1815 0.4523 MISLNRYSVLEPTTTRVVLGVRKLLAVMSSTFMNGGGGVRDLYGEDRATEDQLIITPRSFSVSSGCTLLRDPRYNKGLAFTERERDAHYLRGLLPPAVFNQELQEKRLMHNLRQYEVPLHRYMAMMDLQERNERLFYKILIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPEKNIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSSCLPITIDVGTNNEKLLNDEFYIGLRQKRATGKEYAELLDEFMRAVKQNYGEKVLIQFEDFANHNAFDLLAKYSSSHLVFNDDIQGTASVVLAGLLASLKLVRGTLADHTFLFLGAGEAGTGIAELIALEISKQTKAPVEETRQKIWLVDSKGLIVSSRLGSLQHFKKPWAHEHEPVKELVDAIKAIKPTVLIGSSGVGKTFTKEVIEAMASLNKKPLILALSNPTSQSECTAEEAYTWSKGQAIFASGSPFDPVEYEGKVFVPGQANNAYIFPGFGLGLIISGAIRVRDEMLLAASEALAAQVSQENYDKGLIYPPFSNIRKISAHIAANVAAKAYELGLASHLPRPKDLVKYAESCMYSPGYRNYR 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01170 604 Gene3D - 63 317 IPR037062 GO:0004471
Arst8g01170 604 ProSitePatterns Malic enzymes signature. 316 332 IPR015884 GO:0004471
Arst8g01170 604 Gene3D - 318 604 - -
Arst8g01170 604 Pfam Malic enzyme, NAD binding domain 320 572 IPR012302 GO:0051287
Arst8g01170 604 PANTHER MALIC ENZYME-RELATED 36 604 - -
Arst8g01170 604 PANTHER MALIC ENZYME-RELATED 36 604 - -
Arst8g01170 604 FunFam Malic enzyme 63 317 - -
Arst8g01170 604 SMART Malic_M_2 320 573 IPR012302 GO:0051287
Arst8g01170 604 PRINTS Malic enzyme signature 291 309 IPR001891 GO:0004470|GO:0004471
Arst8g01170 604 PRINTS Malic enzyme signature 195 224 IPR001891 GO:0004470|GO:0004471
Arst8g01170 604 PRINTS Malic enzyme signature 347 363 IPR001891 GO:0004470|GO:0004471
Arst8g01170 604 PRINTS Malic enzyme signature 135 159 IPR001891 GO:0004470|GO:0004471
Arst8g01170 604 PRINTS Malic enzyme signature 231 253 IPR001891 GO:0004470|GO:0004471
Arst8g01170 604 PRINTS Malic enzyme signature 450 466 IPR001891 GO:0004470|GO:0004471
Arst8g01170 604 PRINTS Malic enzyme signature 316 332 IPR001891 GO:0004470|GO:0004471
Arst8g01170 604 SMART malic_2 129 310 IPR012301 GO:0004471
Arst8g01170 604 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 57 319 IPR046346 -
Arst8g01170 604 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 320 603 IPR036291 -
Arst8g01170 604 Pfam Malic enzyme, N-terminal domain 129 309 IPR012301 GO:0004471
Arst8g01170 604 PIRSF ME 40 604 IPR001891 GO:0004470|GO:0004471
Arst8g01170 604 FunFam Malic enzyme 318 604 - -
Arst8g01170 604 CDD NAD_bind_1_malic_enz 320 598 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01170 Arst-Chr8 16213667 16218449 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01170 K00029 - gmx:100801564 1063.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g01170 8 16213667 16218449 Arst8g01170 8 16213667 16218449 ECH
Arst8g01170 8 16213667 16218449 Arst9g00409 9 3328122 3335028 ECH
Arst8g01170 8 16213667 16218449 Arst7g02250 7 51807692 51813601 ECH
Arst5g03134 5 88366321 88371688 Arst8g01170 8 16213667 16218449 ECH
Arst9g00409 9 3328122 3335028 Arst8g01170 8 16213667 16218449 ECH
Arst7g02250 7 51807692 51813601 Arst8g01170 8 16213667 16218449 ECH