Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01095 ATGTCACTGCCAGTATTTAGCATAGTGGGGGAGGAGGAGGGCAAAAGCAATGTCACTTTGTTGGTTTCGTCGACTGCCATGGAATGTGCTCGCATCGAGAGCTCCGAGTTGAAAGTGCGAAACTACATGGAATTGTCTGGTTGTTCTTCTGCTGACAGCTCGGTTTCGCCCTTACCGGACGAGCATAAAAGTAATCTGAATCTGAAAGCTACTGAACTCAGGCTTGGTCTCCCGGGATCTCAGTCTCCTGAGAGAGATTCTGATCATTGCTTAAGAAGCTCAACTCAGTTTGATGAGAAACCACTTTTCCCCCTGTGCCCCTCGACCGATGATCATCATCATTCCCCTGCAAAGGCTGCTGTTTTGGGTAACAAAAGAGGATTCTTAGATGTAATGAATGGGTTCCAGAAGGGGAATTTTTTATCTAATTCAGAAGTGAATACAATTCTGTCGCCGAGGCCTTCTTCTAACTTAGGATTAAAACCTGGTTCTCTGCTTCAGAGTCTTGGGGTTCAACAAGCCAAAATGAAAGAAGTATCGACTACAAAGGTTGGGGTCGAGAAGCCTCATGCTTTCAATGAGACCAGACCCAGTCTTAATGGTTCTGCGAATAATAATAGCAGTGCACCAGCTACCAAGGCTCAGGTCGTGGGGTGGCCTCCCCTAAGGTCATTTAGGAAGAATTCACTGGCAACTAATTCGAAAAACACAGAAGAAGTAGATGGACAACCGGGGTCCGGTCCACTGTTTGTCAAGGTCAGCTTGGAGGGTGCTCCCTATTTAAGGAAAGTAGACTTGAAGAATTACTCTACATACCCGGAACTATGTTCTGCTCTAGAGAAGATGTTCCGCGGTTTTACTATAAGTCAATGCGGATCTTATGGGACTCTGGGAAAGGAGTTGCTGAATGAAACCAAGCTGAAGGATCTTCTTCATGGGTCGGAATATGTTCTTACCTATGAAGACAAAGATAATGATTGGATGCTTGTGGGTGATGTTCCATGGGAGATGTTTATCGAAACATGCCGAAGGCTGAGGATCATGAAGAGTTCAGAAGCAATTGGCCTTGCTTGCAGCTCCAAGGGATGTTGA 1092 0.457 MSLPVFSIVGEEEGKSNVTLLVSSTAMECARIESSELKVRNYMELSGCSSADSSVSPLPDEHKSNLNLKATELRLGLPGSQSPERDSDHCLRSSTQFDEKPLFPLCPSTDDHHHSPAKAAVLGNKRGFLDVMNGFQKGNFLSNSEVNTILSPRPSSNLGLKPGSLLQSLGVQQAKMKEVSTTKVGVEKPHAFNETRPSLNGSANNNSSAPATKAQVVGWPPLRSFRKNSLATNSKNTEEVDGQPGSGPLFVKVSLEGAPYLRKVDLKNYSTYPELCSALEKMFRGFTISQCGSYGTLGKELLNETKLKDLLHGSEYVLTYEDKDNDWMLVGDVPWEMFIETCRRLRIMKSSEAIGLACSSKGC 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01095 363 ProSiteProfiles PB1 domain profile. 248 350 IPR000270 GO:0005515
Arst8g01095 363 MobiDBLite consensus disorder prediction 188 214 - -
Arst8g01095 363 MobiDBLite consensus disorder prediction 195 213 - -
Arst8g01095 363 FunFam Auxin-responsive protein 243 360 - -
Arst8g01095 363 SUPERFAMILY CAD & PB1 domains 244 349 - -
Arst8g01095 363 Pfam AUX/IAA family 71 357 IPR033389 -
Arst8g01095 363 Gene3D - 245 362 - -
Arst8g01095 363 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 66 355 IPR003311 GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01095 Arst-Chr8 15174303 15177562 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01095 250 353 B3 DNA Binding Superfamily AT1G19220 33.654 2.81e-08 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX or IAA Arst8g01095 AUX_IAA 6.7e-84 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01095 K14484 - gmx:100815447 517.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g01095 8 15174303 15177562 Arst8g01095 8 15174303 15177562 ECH