Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01075 ATGTCTACCCAAGGGGTGCGGTTGCACATTCAAGATCGCTATGTGGTGATGGATAATGGTATAGTTCAAGTGACGTTATCGAATCCAGGTGGAATTGTTACTGGGATAGCATATAATGGTGTTGATAATTTGCTTGAAGTTCTCAACAAGGAGACTAATAGAGGGTACTGGGATCTTGTTTGGGGTGCACCAGGAATCAAAGGAACCTTTGATGTGATTCAAGGAACGTTTTTCAGAGTTATAGTTCAAAATGATGAACAAGTTGAGGTTTCATTTACAAGAATGTGGGATCCTTCTCTTGAGGGAAAGTTTGTCCCCTTAAACATTGACAAAAGATTCATACTGCTCCGAGGTTCATCAGGCTTCTACTCTTATGGAATTTATGAGCACTTAAGTGGATGGCCAGACTTCGATCTTAGTGAAACAAGGATCACTTTCAAGCTTAGAAAACACATGTTTCAATACATGGCTATGGCAGACAACAGGCGAAGGCTTATGCCTCTTCCGGATGATCGATTACCAGGGAGATGCCAAACCTTGGCATACCCAGAAGCTGTCAAATTAGTCAATCCCAAGGATCCTCAACTGAAAGATGAGGTGGATGACAAGTATCAATATTCCTGCGACAACATAGATAATAAAGTCCATGGGTGGATATCTTTCAATCCACCAGTGGGATTTTGGCAGATCACACCAAGTGATGAGTTTCGTTCTGGTGGACCGCACAAGCAGAATTTGACCTCACATGTAGGCCCCACCACACTTGCAATGTTTCTTAGTGGTCACTATGCGGGGCAAGATTTGAACCCCAAATTCAAAGATGGTGAACCATGGAAGAAGGTTTTTGGTCCAGTATTCATATATCTTAATTCTGGACCAGTTGGTGATGACCCACATTGGCTCTGGGAGGACGCCAAAATACAGATGATGAATGAAGTTCAAAGCTGGCCATATTCTTTCCCAGCTTCAGAGGATTTTCCAAAGTCGGATCAAAGGGGCAACGTTGGTGGCAGACTGCTCGTCTTAGACAGATATGTCAGCACAGACTTAATATCTGCAAATGGTGCTTATGTTGGTCTAGCCCCGCCAGGAGATGCCGGGTCATGGCAAAGAGAATGCAAGCACTATCAATTCTGGACCAGAGCAGATGAGAATGGATTTTTTACAATCAGGAACATACGTGCTGGCGACTATAACCTTTATGCCTGGGTTCCTGGTTTTGTTGGGGACTACAAATTGGATGATTTGATGAAGATAACCCCAGGTTCTAATATTGAAGTGGGTGAACTGGTATATGAGCCTCCAAGGGTTGGTCCAACATTGTGGGAAATAGGTATTCCTGATCGAACTGCTGCAGAATTTTATGTTCCTGATCCCAAGCCAGAACATATTAATAAGCTTTTTATCAACCATCCTGAAAGGTTCAGACAGTACGGATTATGGGAAAGGTATATAGAATTGTATCCGGAATCAGATTTGGTTTACACAGTTGGTGTCAGTGACTATAGGAGAGATTGGTTTTATGCCCATATTCCCAGAAAGAAAGAGGATAATACCCATCAAGGAACAACTTGGCAAATCAAGTTTGAACTCAATGATGTGGTTCAAGGAAGTACTTATACACTGAGAGTTGCAATTGCATCTGCAACATTAGCTGAATTGCAGATTCGAGTAAATGATCCGAATGCAAGGCGTCCTCTGTTTACGACTGGGCTAATAGGGAGGGATAACTCGATTGCAAGACATGGAATTCATGGACTCTATTGGCTGTACAGTGTGAATGTACCTGGTTCTCTTCTTATAAATGGCCCCAACACTTTATATTTTACTCAACCACGTTGCAACAATTGTTTCCAGGGTATCATGTATGATTATATTCGTATGGAAGGACCTCCTTGA 1899 0.4239 MSTQGVRLHIQDRYVVMDNGIVQVTLSNPGGIVTGIAYNGVDNLLEVLNKETNRGYWDLVWGAPGIKGTFDVIQGTFFRVIVQNDEQVEVSFTRMWDPSLEGKFVPLNIDKRFILLRGSSGFYSYGIYEHLSGWPDFDLSETRITFKLRKHMFQYMAMADNRRRLMPLPDDRLPGRCQTLAYPEAVKLVNPKDPQLKDEVDDKYQYSCDNIDNKVHGWISFNPPVGFWQITPSDEFRSGGPHKQNLTSHVGPTTLAMFLSGHYAGQDLNPKFKDGEPWKKVFGPVFIYLNSGPVGDDPHWLWEDAKIQMMNEVQSWPYSFPASEDFPKSDQRGNVGGRLLVLDRYVSTDLISANGAYVGLAPPGDAGSWQRECKHYQFWTRADENGFFTIRNIRAGDYNLYAWVPGFVGDYKLDDLMKITPGSNIEVGELVYEPPRVGPTLWEIGIPDRTAAEFYVPDPKPEHINKLFINHPERFRQYGLWERYIELYPESDLVYTVGVSDYRRDWFYAHIPRKKEDNTHQGTTWQIKFELNDVVQGSTYTLRVAIASATLAELQIRVNDPNARRPLFTTGLIGRDNSIARHGIHGLYWLYSVNVPGSLLINGPNTLYFTQPRCNNCFQGIMYDYIRMEGPP 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01075 632 Pfam Rhamnogalacturonate lyase family 6 200 IPR010325 -
Arst8g01075 632 SUPERFAMILY Starch-binding domain-like 373 427 IPR013784 GO:0030246
Arst8g01075 632 Pfam Polysaccharide lyase family 4, domain II 354 426 IPR029413 -
Arst8g01075 632 SUPERFAMILY Galactose mutarotase-like 18 296 IPR011013 GO:0003824|GO:0005975|GO:0030246
Arst8g01075 632 CDD RGL4_N 6 292 - -
Arst8g01075 632 Gene3D - 437 629 - -
Arst8g01075 632 CDD RGL4_C 442 629 - -
Arst8g01075 632 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 11 632 - -
Arst8g01075 632 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 11 632 - -
Arst8g01075 632 SUPERFAMILY Galactose-binding domain-like 438 629 IPR008979 -
Arst8g01075 632 FunFam Rhamnogalacturonate lyase B 328 427 - -
Arst8g01075 632 CDD RGL4_M 331 430 IPR029413 -
Arst8g01075 632 Gene3D - 8 304 IPR014718 GO:0030246
Arst8g01075 632 Pfam Polysaccharide lyase family 4, domain III 440 628 IPR029411 -
Arst8g01075 632 Gene3D - 329 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01075 Arst-Chr8 14903695 14909203 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01075 1 632 Polysaccharide Lyase AT1G09910 70.411 0.0 954
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01075 K18195 - gmx:100814185 1134.01