Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst8g01054 ATGCCTCACAGAGCCACATACATTTTCCCGCGTCAATTTGGGGAGAGAGGGTTAGATGAGTCTTCGAAACAGCTATTGGATCACGAGAAGAAGAAGACACTTACCTCATGGGTCAAATCGGAACCATCCTTCGGGATCGAAAGCGACGCTACTTCCAAGAAGTCCAAAAACGACGTCGTTGAAGATGATGAAGATGTCGTTTACTCTAAAACACACTCCGCTGTGTCGGAGCTCTTCACCGCCGTTGGTGGCCGCCGTGAGAATCTCCGGAATAAGCAAAAGCATGTCGCCCGTGCGTTCCGTGACTGGCTGATCGAGAGAAAAGGAGATCGCCGATCCAGTCATGATCACCGGAGGTTCTCGTTGTCCGAGGAAGAAGACGAGTGCGGGCTTCTGCTTCCTCCGTCGGCGGCGAAGGACAGTGCCGGTGGAGCATTGGACCAGAGTTTTGACCGGCAGGTGTCGCTTCCCAGAATGTCTAGCGGGAGCAGCTACGCCGGGAGCTTGTTCTCCGGGACGGCAACGGCTACGACGGTGGACGGGAATTTCTTGAGCGAGGTCGTGAAGGAGGAAACGACGTCGTCTTCGACGTCGAGTAGGAGGAGGAGGCAACAGGAGGAGGTGGAGGAAGAAGATGAGAAAGAGAGGAGAGAGAAGGTTGCGGAAAAGTCGAAGGAGAGCTACATGCTGCAGGCTACAATGGCGAAGAGGCTCACTTGCTTGGCGAGTCTCGTGACTGAGCCCATTCTTGCTCCCACCACTGAGACATGGGATTCCGAATCCGTTTCCTATCGTCTATGGGTGAGTGGGTGTTTGTCATACTCAGACAAGATATCGGATGGATTTTACAACATACTGGGGATGAATCCGTACCTATGGGTGATGTGCAATGAGGTGGAGGAGGAAGGGAAAAAGATACCTAGTTTGATGGCGCTGAAGGCAATTGAACCCGGCGAGACGAGTATAGAGGTGGTTCTTGTTGATAGACAAGACGATTCTCGGTTGAAGGTACTTCAAGATAAAGCGCAGGAGTTGTATGGTGCTTCAGAGAATACTCTCGTGTTGGTTGAACAGCTTGGAAAACTTGTTGCCTCATATATGGGGGGTACATATCCGGTGGAGCAAGGAGATCTGCACAAGCGGTGGAAGATGATCAGCAGGAGGTTGAGGAATTTTCACAAGTGTGTTGTTCTTCCCATAGGCAGCTTATCTACTGGGCTTTGTAGGCATAGGGCCATTCTCTTCAAGAAATTGGCAGATTATATAGGTTTGCCATGCCGCATTGCTCGAGGTTGCAAGTATTGTGCTGCAGATCATAGATCCTCTTGCTTAGTCAAGTTCAAAGATGACAATCAGCTCTCAAGGGAATATGTAGTCGACCTGGTTGGGGAACCAGGAAATGTCCATGGGCCAGATTCCTCAATTAATGGAGCGTATCTTTCTTCAATGCCATCCCCATTTCAAATTTCTCATTTAAAAGAATCACAATCACCTTATATGGATGGCAGAACATGTTCACAATCTCCGAGTTCCAACCACATTTCTGTAATCCCTGAAAGTCATCCGTATTTAGGCTGTGAACAGGAAGATCAACAAATTAAAGAAGCTGAATTGCTAAAAAATCACAACAGCTCCATTTATTCTTCATTTGAGCAATCCCAAGAAGAAACAGTTCCACCTCCAATTCTTTTGGATTTAAACGAGAATAATAAGGCATGTGCAGTCCTGGACCCAATTTTGCCTTCCATCCATGAAGATGTTTCTAAAGCTCTTCATCCAGCTACTGAAGTAGCATTTCATGATTATGTTGGACTTGGCAAAGATGCAATTACTGTACAAGAAACTTACAAGAATGAGATCATTGTTACTGAAAGTTCTGTGGTAAAAACTAATTTTAAGCAATCTTTATTGTGCTCATCCAGCCAATCAGAACAGGTGCAGGTAGACAATGGAATCGAAAACCAGGGCTGTTTACCATCTGGGAATATTCCACGGTACCTGAATCTTGAGCCATCACTTGCAATGGACTGGCTTGAGATATCATGGGAGGAATTACGTATCAAAGAGCGTGTTGGTGCTGGTTCATTTGGGACAGTGCACCGTGCGGAATGGCATGGATCAGATGTTGCCGTCAAGGTTTTAACAGTTCAGGATTTCAGTGATGATAAATTAAAGGACTTTCTGAGAGAGGTTGCAATAATGAAACGGGTTCGCCATCCAAATGTGGTGCTCTTCATGGGTGCTGTTACAAAACGCCCCCATCTATCAATAGTGACAGAATATTTGCAAAGAGGTAGTTTATACCGACTGATACATAAGCCAACAGCTGGTGAACATTTGGATAGCAGGAGAAGATTACGGATGGCTTTAGATGTGGCTAAAGGGATCAATTATCTTCATTGTCTAAAACCTCCTATCGTGCACTGGGATCTCAAATCTCCAAACTTGTTAGTGGACAAAAACTGGAACGTGAAGGTTTGCGATTTTGGGTTGTCTAGATTTAAGGCAAATACATTCATACCATCAAAGTCTGTTACTGGAACACCTGAATGGATGGCACCAGAGTTTCTCCGTGGAGAACCTTCAAATGAGAAATCTGATGTATACAGTTTTGGAGTTATCCTATGGGAGCTAGTAACCATGAAACAACCATGGATGGGACTTAGCCCTGCCCAGGTGGTTGGAGCTGTTGGTTTCCAGAATAGGAAGCTTGCCATTCCTCCAAATGTCTCCCCAGTATTGGTCTCCCTCATGGAATCTTGTTGGGCTGATGACCCCGCCAAACGCCCATCTTTTGCTAGTATGGTTGTCTCGCTGAAGAAGTTGCTCAAGTCTCCAGCAGAGATGATAAAAATGGGCGAGACTTAA 2868 0.4623 MPHRATYIFPRQFGERGLDESSKQLLDHEKKKTLTSWVKSEPSFGIESDATSKKSKNDVVEDDEDVVYSKTHSAVSELFTAVGGRRENLRNKQKHVARAFRDWLIERKGDRRSSHDHRRFSLSEEEDECGLLLPPSAAKDSAGGALDQSFDRQVSLPRMSSGSSYAGSLFSGTATATTVDGNFLSEVVKEETTSSSTSSRRRRQQEEVEEEDEKERREKVAEKSKESYMLQATMAKRLTCLASLVTEPILAPTTETWDSESVSYRLWVSGCLSYSDKISDGFYNILGMNPYLWVMCNEVEEEGKKIPSLMALKAIEPGETSIEVVLVDRQDDSRLKVLQDKAQELYGASENTLVLVEQLGKLVASYMGGTYPVEQGDLHKRWKMISRRLRNFHKCVVLPIGSLSTGLCRHRAILFKKLADYIGLPCRIARGCKYCAADHRSSCLVKFKDDNQLSREYVVDLVGEPGNVHGPDSSINGAYLSSMPSPFQISHLKESQSPYMDGRTCSQSPSSNHISVIPESHPYLGCEQEDQQIKEAELLKNHNSSIYSSFEQSQEETVPPPILLDLNENNKACAVLDPILPSIHEDVSKALHPATEVAFHDYVGLGKDAITVQETYKNEIIVTESSVVKTNFKQSLLCSSSQSEQVQVDNGIENQGCLPSGNIPRYLNLEPSLAMDWLEISWEELRIKERVGAGSFGTVHRAEWHGSDVAVKVLTVQDFSDDKLKDFLREVAIMKRVRHPNVVLFMGAVTKRPHLSIVTEYLQRGSLYRLIHKPTAGEHLDSRRRLRMALDVAKGINYLHCLKPPIVHWDLKSPNLLVDKNWNVKVCDFGLSRFKANTFIPSKSVTGTPEWMAPEFLRGEPSNEKSDVYSFGVILWELVTMKQPWMGLSPAQVVGAVGFQNRKLAIPPNVSPVLVSLMESCWADDPAKRPSFASMVVSLKKLLKSPAEMIKMGET 955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst8g01054 955 Gene3D Transferase(Phosphotransferase) domain 1 764 951 - -
Arst8g01054 955 Pfam Ethylene-responsive protein kinase Le-CTR1 259 468 - -
Arst8g01054 955 SUPERFAMILY Protein kinase-like (PK-like) 663 935 IPR011009 -
Arst8g01054 955 ProSitePatterns Serine/Threonine protein kinases active-site signature. 806 818 IPR008271 GO:0004672|GO:0006468
Arst8g01054 955 MobiDBLite consensus disorder prediction 195 223 - -
Arst8g01054 955 FunFam Serine/threonine-protein kinase isoform 1 675 763 - -
Arst8g01054 955 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 200 944 - -
Arst8g01054 955 SMART serkin_6 685 943 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g01054 955 Gene3D Phosphorylase Kinase; domain 1 678 763 - -
Arst8g01054 955 Pfam Protein tyrosine and serine/threonine kinase 685 938 IPR001245 GO:0004672|GO:0006468
Arst8g01054 955 ProSitePatterns Protein kinases ATP-binding region signature. 691 712 IPR017441 GO:0005524
Arst8g01054 955 Coils Coil 203 223 - -
Arst8g01054 955 CDD STKc_MAP3K-like 691 939 - -
Arst8g01054 955 MobiDBLite consensus disorder prediction 187 223 - -
Arst8g01054 955 FunFam Serine/threonine-protein kinase CTR1 764 949 - -
Arst8g01054 955 ProSiteProfiles Protein kinase domain profile. 685 943 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst8g01054 955 PRINTS Tyrosine kinase catalytic domain signature 800 818 IPR001245 GO:0004672|GO:0006468
Arst8g01054 955 PRINTS Tyrosine kinase catalytic domain signature 910 932 IPR001245 GO:0004672|GO:0006468
Arst8g01054 955 PRINTS Tyrosine kinase catalytic domain signature 866 888 IPR001245 GO:0004672|GO:0006468
Arst8g01054 955 PRINTS Tyrosine kinase catalytic domain signature 759 772 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst8g01054 Arst-Chr8 14541992 14549491 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst8g01054 1 953 MAP Kinase Kinase Kinase AT4G24480 55.701 0.0 1026
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Arst8g01054 PK_Tyr_Ser-Thr 2.3e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst8g01054 - - adu:107461056 1803.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst7g02518 7 63262247 63268561 Arst8g01054 8 14541992 14549491 PCT
Arst7g00560 7 3698663 3702813 Arst8g01054 8 14541992 14549491 PCT